RNA–Protein interactions for RNA: ENST00000410889.1

RNU4-27P-201, Transcript of RNA, U4 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU4-27P, Length 139 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-27P-201ENST00000410889 UQCR11O14957 56 aa-0.12□□□□□ -2.43
RNU4-27P-201ENST00000410889 APOC3P02656 99 aa-0.12□□□□□ -2.43
RNU4-27P-201ENST00000410889 HMGN1P05114 100 aa-0.12□□□□□ -2.43
RNU4-27P-201ENST00000410889 FGF7P21781 194 aa-0.12□□□□□ -2.43
RNU4-27P-201ENST00000410889 SPRR1AP35321 89 aa-0.12□□□□□ -2.43
RNU4-27P-201ENST00000410889 CATR1Q13166 79 aa-0.12□□□□□ -2.43
RNU4-27P-201ENST00000410889 Q6JHZ5 121 aa-0.12□□□□□ -2.43
RNU4-27P-201ENST00000410889 MGST2Q99735 147 aa-0.12□□□□□ -2.43
RNU4-27P-201ENST00000410889 LINC00472Q9H8W2 130 aa-0.12□□□□□ -2.43
RNU4-27P-201ENST00000410889 DYNLRB1Q9NP97 96 aa-0.12□□□□□ -2.43
RNU4-27P-201ENST00000410889 ERCC6L2Q5T890 1561 aa-0.12□□□□□ -2.43
RNU4-27P-201ENST00000410889 DOCK1Q14185 1865 aa-0.12□□□□□ -2.43
RNU4-27P-201ENST00000410889 FAT2Q9NYQ8 4349 aa-0.12□□□□□ -2.43
RNU4-27P-201ENST00000410889 LRP6O75581 1613 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 PIEZO2Q9H5I5 2752 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 STAB1Q9NY15 2570 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 SPTBN1Q01082 2364 aaKnown RBP-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 KDM3BQ7LBC6 1761 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 BSNQ9UPA5 3926 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 TRBV7-3A0A075B6L6 115 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 FXYD6-FXYD2A0A087WZ82 144 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 TRBV6-1A0A0K0K1D8 114 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 LOC100130705A0A1B0GUX0 176 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 HMGN4O00479 90 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 SSSCA1O60232 199 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 APOC2P02655 101 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 SPRR2DP22532 72 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 TPPP2P59282 170 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 DCDP81605 110 aaKnown RBP-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 PIGYQ3MUY2 71 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 COMMD6Q7Z4G1 85 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 C5orf38Q86SI9 138 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 BAGE2Q86Y30 109 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 C8orf59Q8N0T1 100 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 C1orf54Q8WWF1 131 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 TSLPQ969D9 159 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 SPANXDQ9BXN6 97 aa-0.13□□□□□ -2.43
RNU4-27P-201ENST00000410889 MUC2Q02817 5179 aa-0.14□□□□□ -2.43
RNU4-27P-201ENST00000410889 BCL9LQ86UU0 1499 aa-0.14□□□□□ -2.43
RNU4-27P-201ENST00000410889 ROCK2O75116 1388 aaKnown RBP-0.14□□□□□ -2.43
RNU4-27P-201ENST00000410889 KTN1Q86UP2 1357 aaKnown RBP-0.14□□□□□ -2.43
RNU4-27P-201ENST00000410889 IGLC7A0M8Q6 106 aa-0.14□□□□□ -2.43
RNU4-27P-201ENST00000410889 IFNGP01579 166 aa-0.14□□□□□ -2.43
RNU4-27P-201ENST00000410889 AKAIN1P0CW23 69 aa-0.14□□□□□ -2.43
RNU4-27P-201ENST00000410889 LINC01558Q9Y6Z2 57 aa-0.14□□□□□ -2.43
RNU4-27P-201ENST00000410889 SYNE2Q8WXH0 6885 aaKnown RBP-0.14□□□□□ -2.43
RNU4-27P-201ENST00000410889 A2ML1A8K2U0 1454 aa-0.15□□□□□ -2.43
RNU4-27P-201ENST00000410889 SPTA1P02549 2419 aa-0.15□□□□□ -2.43
RNU4-27P-201ENST00000410889 EP300Q09472 2414 aaPredicted RBP-0.15□□□□□ -2.43
RNU4-27P-201ENST00000410889 ARAP2Q8WZ64 1704 aa-0.15□□□□□ -2.43
RNU4-27P-201ENST00000410889 LAMC1P11047 1609 aa-0.15□□□□□ -2.43
RNU4-27P-201ENST00000410889 LOC285095A0A1B0GVY8 99 aa-0.15□□□□□ -2.43
RNU4-27P-201ENST00000410889 SFT2D2O95562 160 aa-0.15□□□□□ -2.43
RNU4-27P-201ENST00000410889 PRM1P04553 51 aa-0.15□□□□□ -2.43
RNU4-27P-201ENST00000410889 MRPL54Q6P161 138 aaKnown RBP-0.15□□□□□ -2.43
RNU4-27P-201ENST00000410889 ATRQ13535 2644 aa-0.15□□□□□ -2.43
RNU4-27P-201ENST00000410889 FSIP2Q5CZC0 6907 aa-0.15□□□□□ -2.43
RNU4-27P-201ENST00000410889 MAP1BP46821 2468 aaKnown RBP-0.15□□□□□ -2.43
RNU4-27P-201ENST00000410889 LRRC37A2A6NM11 1700 aa-0.16□□□□□ -2.43
RNU4-27P-201ENST00000410889 RIMS1Q86UR5 1692 aaKnown RBP-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 OOSP1A8MZH6 123 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 CHKB-CPT1BH3BT56 60 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 TNFP01375 233 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 MGPP08493 103 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 COX6B1P14854 86 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 KRTAP6-1Q3LI64 71 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 C9orf153Q5TBE3 101 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 MYOZ3Q8TDC0 251 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 PP6455Q8WZ26 134 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 LINC00474Q9P2X8 69 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 UQCR10Q9UDW1 63 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 ANKRD17O75179 2603 aaKnown RBP-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 NSD3Q9BZ95 1437 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 SHANK2Q9UPX8 1470 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 WDR7Q9Y4E6 1490 aa-0.16□□□□□ -2.44
RNU4-27P-201ENST00000410889 SETXQ7Z333 2677 aaKnown RBP-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 PRKDCP78527 4128 aaKnown RBP-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 PKD1L1Q8TDX9 2849 aa-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 PPRC1Q5VV67 1664 aaKnown RBP-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 ZFHX3Q15911 3703 aa-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 CHD8Q9HCK8 2581 aa-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 UBE2L5PA0A1B0GUS4 154 aa-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 K7EQZ3 153 aa-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 ATP5EP56381 51 aaPredicted RBP-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 UBE2L3P68036 154 aaKnown RBP-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 RPL13AP3Q6NVV1 102 aa-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 SMG6Q86US8 1419 aaKnown RBP-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 DEFB123Q8N688 67 aa-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 TMEM263Q8WUH6 116 aaKnown RBP-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 NXT2Q9NPJ8 142 aaKnown RBP-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 CDC42SE2Q9NRR3 84 aa-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 TENM2Q9NT68 2774 aa-0.17□□□□□ -2.44
RNU4-27P-201ENST00000410889 PKHD1P08F94 4074 aa-0.18□□□□□ -2.44
RNU4-27P-201ENST00000410889 LRP1BQ9NZR2 4599 aa-0.18□□□□□ -2.44
RNU4-27P-201ENST00000410889 COL6A3P12111 3177 aa-0.18□□□□□ -2.44
RNU4-27P-201ENST00000410889 MUC12Q9UKN1 5478 aa-0.18□□□□□ -2.44
RNU4-27P-201ENST00000410889 ACANP16112 2415 aa-0.18□□□□□ -2.44
RNU4-27P-201ENST00000410889 FAM24AA6NFZ4 105 aa-0.18□□□□□ -2.44
RNU4-27P-201ENST00000410889 SNAPC5O75971 98 aa-0.18□□□□□ -2.44
RNU4-27P-201ENST00000410889 IGLC1P0CG04 106 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms