RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 STAB1Q9NY15 2570 aa3.92□□□□□ -1.78
EPHA4-202ENST00000409854 TRBV10-1A0A0K0K1A3 114 aa3.92□□□□□ -1.78
EPHA4-202ENST00000409854 LINC01549A6NIU2 74 aa3.92□□□□□ -1.78
EPHA4-202ENST00000409854 LYRM9A8MSI8 78 aa3.92□□□□□ -1.78
EPHA4-202ENST00000409854 I3L3M4 83 aa3.92□□□□□ -1.78
EPHA4-202ENST00000409854 TSHBP01222 138 aa3.92□□□□□ -1.78
EPHA4-202ENST00000409854 P0DMU3 169 aa3.92□□□□□ -1.78
EPHA4-202ENST00000409854 FAM231AP0DMU4 169 aa3.92□□□□□ -1.78
EPHA4-202ENST00000409854 FAM231CP0DMU5 169 aa3.92□□□□□ -1.78
EPHA4-202ENST00000409854 RHOHQ15669 191 aa3.92□□□□□ -1.78
EPHA4-202ENST00000409854 MRPL23Q16540 153 aaKnown RBP3.92□□□□□ -1.78
EPHA4-202ENST00000409854 LCE2DQ5TA82 110 aaPredicted RBP3.92□□□□□ -1.78
EPHA4-202ENST00000409854 LINC01545Q5VT33 79 aa3.92□□□□□ -1.78
EPHA4-202ENST00000409854 H3BMG7 143 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 K7EQD1 137 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 NHLRC4P0CG21 123 aaPredicted RBP3.91□□□□□ -1.78
EPHA4-202ENST00000409854 TTC32Q5I0X7 151 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 IFI27L1Q96BM0 104 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 KIR2DL4Q99706 377 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 TP73-AS1Q9UF72 201 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 Q9UF83 564 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 IGHV4-28A0A0C4DH34 117 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 TRBV6-4A0A1B0GX49 114 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 ZNF561-AS1K7EIQ3 104 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 ATP5LO75964 103 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 C9JAW5 83 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 EMP1P54849 157 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 FHL2Q14192 279 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 LGALS9CQ6DKI2 356 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 C2orf66Q6UXQ4 117 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 FAM19A5Q7Z5A7 132 aaPredicted RBP3.91□□□□□ -1.78
EPHA4-202ENST00000409854 SLC25A29Q8N8R3 303 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 PRADC1Q9BSG0 188 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 CDIP1Q9H305 208 aa3.91□□□□□ -1.78
EPHA4-202ENST00000409854 TRGV2A0A075B6R0 118 aa3.9□□□□□ -1.78
EPHA4-202ENST00000409854 LINC00694P0DN24 101 aa3.9□□□□□ -1.78
EPHA4-202ENST00000409854 ZMAT4Q9H898 229 aa3.9□□□□□ -1.78
EPHA4-202ENST00000409854 DKK2Q9UBU2 259 aa3.9□□□□□ -1.78
EPHA4-202ENST00000409854 PKD1L1Q8TDX9 2849 aa3.9□□□□□ -1.78
EPHA4-202ENST00000409854 TRBV7-3A0A075B6L6 115 aa3.9□□□□□ -1.79
EPHA4-202ENST00000409854 ATP5G1P05496 136 aa3.9□□□□□ -1.79
EPHA4-202ENST00000409854 FAM222AQ5U5X8 452 aa3.9□□□□□ -1.79
EPHA4-202ENST00000409854 TMEM101Q96IK0 257 aa3.9□□□□□ -1.79
EPHA4-202ENST00000409854 IGIPA6NJ69 53 aa3.9□□□□□ -1.79
EPHA4-202ENST00000409854 UBE2D3P61077 147 aa3.9□□□□□ -1.79
EPHA4-202ENST00000409854 UBE2D2P62837 147 aa3.9□□□□□ -1.79
EPHA4-202ENST00000409854 GAGE2BQ13066 116 aa3.9□□□□□ -1.79
EPHA4-202ENST00000409854 GAGE2EQ4V326 116 aa3.9□□□□□ -1.79
EPHA4-202ENST00000409854 MEIG1Q5JSS6 88 aa3.9□□□□□ -1.79
EPHA4-202ENST00000409854 C20orf203Q8NBC4 194 aa3.9□□□□□ -1.79
EPHA4-202ENST00000409854 GAGE2DQ9UEU5 116 aa3.9□□□□□ -1.79
EPHA4-202ENST00000409854 TRAV12-1A0A0B4J245 112 aa3.89□□□□□ -1.79
EPHA4-202ENST00000409854 H3BUT2 72 aa3.89□□□□□ -1.79
EPHA4-202ENST00000409854 TIMM17AQ99595 171 aa3.89□□□□□ -1.79
EPHA4-202ENST00000409854 TINCRA0A1B0GVN0 87 aa3.89□□□□□ -1.79
EPHA4-202ENST00000409854 COX8AP10176 69 aa3.89□□□□□ -1.79
EPHA4-202ENST00000409854 RPL36AP83881 106 aaKnown RBP3.89□□□□□ -1.79
EPHA4-202ENST00000409854 RPL36ALQ969Q0 106 aaKnown RBP3.89□□□□□ -1.79
EPHA4-202ENST00000409854 SCGB3A1Q96QR1 104 aa3.89□□□□□ -1.79
EPHA4-202ENST00000409854 CHCHD7Q9BUK0 85 aa3.89□□□□□ -1.79
EPHA4-202ENST00000409854 C11orf68Q9H3H3 251 aaKnown RBP3.89□□□□□ -1.79
EPHA4-202ENST00000409854 TRGV4A0A0C4DH28 118 aa3.89□□□□□ -1.79
EPHA4-202ENST00000409854 DAZ4Q86SG3 579 aaKnown RBP3.89□□□□□ -1.79
EPHA4-202ENST00000409854 TMEM141Q96I45 108 aa3.89□□□□□ -1.79
EPHA4-202ENST00000409854 DAZ3Q9NR90 486 aaKnown RBP3.89□□□□□ -1.79
EPHA4-202ENST00000409854 CELA1Q9UNI1 258 aa3.89□□□□□ -1.79
EPHA4-202ENST00000409854 SMIM13P0DJ93 91 aa3.88□□□□□ -1.79
EPHA4-202ENST00000409854 DEFB130BP0DP73 79 aa3.88□□□□□ -1.79
EPHA4-202ENST00000409854 DEFB130AP0DP74 79 aa3.88□□□□□ -1.79
EPHA4-202ENST00000409854 RPL39P62891 51 aaKnown RBP3.88□□□□□ -1.79
EPHA4-202ENST00000409854 BAALCQ8WXS3 180 aa3.88□□□□□ -1.79
EPHA4-202ENST00000409854 RAB37Q96AX2 223 aa3.88□□□□□ -1.79
EPHA4-202ENST00000409854 PYGO1Q9Y3Y4 419 aa3.88□□□□□ -1.79
EPHA4-202ENST00000409854 COL6A5A8TX70 2615 aa3.88□□□□□ -1.79
EPHA4-202ENST00000409854 K7EIL1 84 aa3.88□□□□□ -1.79
EPHA4-202ENST00000409854 CCDC179H3BU77 68 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 DEFB4AO15263 64 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 MT-ATP8P03928 68 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 SPART-AS1P0CW21 52 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 TIRAPP58753 221 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 C4orf48Q5BLP8 95 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 SBSPONQ8IVN8 264 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 PPDPFLQ8WWR9 84 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 FAM104AQ969W3 186 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 RETNQ9HD89 108 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 HHLA3Q9XRX5 114 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 LOC100131303A0A0U1RQF7 123 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 hDV102S1A0JD36 115 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 SNCGO76070 127 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 APOMO95445 188 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 PRSS1P07477 247 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 XGP55808 180 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 GAGE13Q4V321 117 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 PHLDA1Q8WV24 401 aaPredicted RBP3.87□□□□□ -1.79
EPHA4-202ENST00000409854 PRO0255Q9UI72 69 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 IGHV3-38A0A0C4DH36 116 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 DAD1P61803 113 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 NTM-AS1Q6ZSK4 140 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 TM2D3Q9BRN9 247 aa3.87□□□□□ -1.79
EPHA4-202ENST00000409854 TIMM21Q9BVV7 248 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms