RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 CLPSL2Q6UWE3 100 aa9.21□□□□□ -0.94
GYPC-203ENST00000409836 RPS10P5Q9NQ39 176 aa9.21□□□□□ -0.94
GYPC-203ENST00000409836 UBE2D4Q9Y2X8 147 aa9.21□□□□□ -0.94
GYPC-203ENST00000409836 HSPG2P98160 4391 aa9.21□□□□□ -0.94
GYPC-203ENST00000409836 APOBP04114 4563 aaKnown RBP9.21□□□□□ -0.94
GYPC-203ENST00000409836 OR5A1Q8NGJ0 315 aa9.2□□□□□ -0.94
GYPC-203ENST00000409836 CDC42SE2Q9NRR3 84 aa9.2□□□□□ -0.94
GYPC-203ENST00000409836 C14orf177Q52M58 125 aa9.19□□□□□ -0.94
GYPC-203ENST00000409836 SLC7A5P1Q8MH63 180 aa9.19□□□□□ -0.94
GYPC-203ENST00000409836 TMEM18Q96B42 140 aa9.19□□□□□ -0.94
GYPC-203ENST00000409836 MAP1LC3AQ9H492 121 aa9.19□□□□□ -0.94
GYPC-203ENST00000409836 SPANXA1Q9NS26 97 aa9.19□□□□□ -0.94
GYPC-203ENST00000409836 HERC2O95714 4834 aa9.19□□□□□ -0.94
GYPC-203ENST00000409836 LOC105371267A0A1B0GV96 52 aa9.18□□□□□ -0.94
GYPC-203ENST00000409836 CTAG1AP78358 180 aa9.18□□□□□ -0.94
GYPC-203ENST00000409836 RNASEKQ6P5S7 137 aaKnown RBP9.18□□□□□ -0.94
GYPC-203ENST00000409836 BAALCQ8WXS3 180 aa9.18□□□□□ -0.94
GYPC-203ENST00000409836 TMEM101Q96IK0 257 aa9.18□□□□□ -0.94
GYPC-203ENST00000409836 YPEL4Q96NS1 127 aa9.18□□□□□ -0.94
GYPC-203ENST00000409836 MRPS36P82909 103 aaKnown RBP9.17□□□□□ -0.94
GYPC-203ENST00000409836 ZNF664Q8N3J9 261 aa9.17□□□□□ -0.94
GYPC-203ENST00000409836 Q8N8P6 123 aa9.17□□□□□ -0.94
GYPC-203ENST00000409836 FAM104AQ969W3 186 aa9.17□□□□□ -0.94
GYPC-203ENST00000409836 NXT2Q9NPJ8 142 aaKnown RBP9.17□□□□□ -0.94
GYPC-203ENST00000409836 IGLV5-52A0A0A0MRZ9 124 aa9.16□□□□□ -0.94
GYPC-203ENST00000409836 LINC01546A6NGU7 62 aa9.16□□□□□ -0.94
GYPC-203ENST00000409836 USP17L23D6RBM5 183 aa9.16□□□□□ -0.94
GYPC-203ENST00000409836 CCL25O15444 150 aa9.16□□□□□ -0.94
GYPC-203ENST00000409836 PYGO1Q9Y3Y4 419 aa9.16□□□□□ -0.94
GYPC-203ENST00000409836 RYR1P21817 5038 aa9.15□□□□□ -0.94
GYPC-203ENST00000409836 IGLV10-54A0A075B6I4 117 aa9.15□□□□□ -0.94
GYPC-203ENST00000409836 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.94
GYPC-203ENST00000409836 LECT2O14960 151 aa9.15□□□□□ -0.94
GYPC-203ENST00000409836 NPSP0C0P6 89 aa9.15□□□□□ -0.94
GYPC-203ENST00000409836 Q6ZSA8 131 aa9.15□□□□□ -0.94
GYPC-203ENST00000409836 CHCHD10Q8WYQ3 142 aaPredicted RBP9.15□□□□□ -0.94
GYPC-203ENST00000409836 RAB5AP20339 215 aa9.14□□□□□ -0.95
GYPC-203ENST00000409836 GCSHP23434 173 aa9.14□□□□□ -0.95
GYPC-203ENST00000409836 KRTAP10-1P60331 282 aa9.14□□□□□ -0.95
GYPC-203ENST00000409836 RPL39P62891 51 aaKnown RBP9.14□□□□□ -0.95
GYPC-203ENST00000409836 Q6ZUT4 128 aa9.14□□□□□ -0.95
GYPC-203ENST00000409836 ALKBH7Q9BT30 221 aaPredicted RBP9.14□□□□□ -0.95
GYPC-203ENST00000409836 TGIF2-C20orf24A0A0A6YYL0 155 aa9.13□□□□□ -0.95
GYPC-203ENST00000409836 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.951e-6■■□□□ 11.7
GYPC-203ENST00000409836 CNBPP62633 177 aaKnown RBP9.13□□□□□ -0.95
GYPC-203ENST00000409836 FOXI1Q12951 378 aa9.13□□□□□ -0.95
GYPC-203ENST00000409836 ORMDL2Q53FV1 153 aa9.13□□□□□ -0.95
GYPC-203ENST00000409836 MRPL18Q9H0U6 180 aaKnown RBP9.13□□□□□ -0.95
GYPC-203ENST00000409836 PRSS1P07477 247 aa9.12□□□□□ -0.95
GYPC-203ENST00000409836 DGAT2L7PQ6IED9 249 aa9.12□□□□□ -0.95
GYPC-203ENST00000409836 C15orf56Q8N910 161 aa9.12□□□□□ -0.95
GYPC-203ENST00000409836 GVQW2A0A096LPI5 108 aaPredicted RBP9.11□□□□□ -0.95
GYPC-203ENST00000409836 GAGE12HA6NDE8 117 aa9.11□□□□□ -0.95
GYPC-203ENST00000409836 KIAA1644Q3SXP7 199 aa9.11□□□□□ -0.95
GYPC-203ENST00000409836 CD164L2Q6UWJ8 174 aa9.11□□□□□ -0.95
GYPC-203ENST00000409836 CYSLTR1Q9Y271 337 aa9.11□□□□□ -0.95
GYPC-203ENST00000409836 DNAH8Q96JB1 4490 aa9.1□□□□□ -0.95
GYPC-203ENST00000409836 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.1□□□□□ -0.95
GYPC-203ENST00000409836 LOC389332A0A1B0GUA5 103 aa9.1□□□□□ -0.95
GYPC-203ENST00000409836 C1orf196B1AJZ1 125 aa9.1□□□□□ -0.95
GYPC-203ENST00000409836 IFI27P40305 119 aaPredicted RBP9.1□□□□□ -0.95
GYPC-203ENST00000409836 S100A12P80511 92 aa9.1□□□□□ -0.95
GYPC-203ENST00000409836 SS18Q15532 418 aa9.1□□□□□ -0.95
GYPC-203ENST00000409836 C2orf66Q6UXQ4 117 aa9.1□□□□□ -0.95
GYPC-203ENST00000409836 IGLV4-3A0A075B6K6 122 aa9.09□□□□□ -0.95
GYPC-203ENST00000409836 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
GYPC-203ENST00000409836 LINC01549A6NIU2 74 aa9.09□□□□□ -0.95
GYPC-203ENST00000409836 G0S2P27469 103 aa9.09□□□□□ -0.95
GYPC-203ENST00000409836 IGIPA6NJ69 53 aa9.08□□□□□ -0.96
GYPC-203ENST00000409836 XCL1P47992 114 aa9.08□□□□□ -0.96
GYPC-203ENST00000409836 CFAP161Q6P656 301 aa9.08□□□□□ -0.96
GYPC-203ENST00000409836 C9orf163Q8N9P6 203 aa9.08□□□□□ -0.96
GYPC-203ENST00000409836 TOMM6Q96B49 74 aa9.08□□□□□ -0.96
GYPC-203ENST00000409836 TMEM141Q96I45 108 aa9.08□□□□□ -0.96
GYPC-203ENST00000409836 TIMM17AQ99595 171 aa9.08□□□□□ -0.96
GYPC-203ENST00000409836 SMCO4Q9NRQ5 59 aa9.08□□□□□ -0.96
GYPC-203ENST00000409836 XGP55808 180 aa9.07□□□□□ -0.96
GYPC-203ENST00000409836 FABP9Q0Z7S8 132 aa9.07□□□□□ -0.96
GYPC-203ENST00000409836 RNASE13Q5GAN3 156 aaKnown RBP9.07□□□□□ -0.96
GYPC-203ENST00000409836 LINC00173Q6ZV60 143 aa9.07□□□□□ -0.96
GYPC-203ENST00000409836 CBLN2Q8IUK8 224 aa9.07□□□□□ -0.96
GYPC-203ENST00000409836 AMELXQ99217 191 aa9.07□□□□□ -0.96
GYPC-203ENST00000409836 TRAPPC1Q9Y5R8 145 aa9.07□□□□□ -0.96
GYPC-203ENST00000409836 IGHV3OR16-9A0A0B4J2B5 98 aa9.06□□□□□ -0.96
GYPC-203ENST00000409836 FAM19A3Q7Z5A8 133 aa9.06□□□□□ -0.96
GYPC-203ENST00000409836 C18orf32Q8TCD1 76 aa9.06□□□□□ -0.96
GYPC-203ENST00000409836 TRAV13-1A0A0B4J241 112 aa9.05□□□□□ -0.96
GYPC-203ENST00000409836 IGHV1-58A0A0C4DH39 117 aa9.05□□□□□ -0.96
GYPC-203ENST00000409836 IFITM10A6NMD0 228 aa9.05□□□□□ -0.96
GYPC-203ENST00000409836 PRSS3P2Q8NHM4 247 aa9.05□□□□□ -0.96
GYPC-203ENST00000409836 OPRPNQ99935 248 aaPredicted RBP9.05□□□□□ -0.96
GYPC-203ENST00000409836 TMA7Q9Y2S6 64 aaKnown RBP9.05□□□□□ -0.96
GYPC-203ENST00000409836 hDV102S1A0JD36 115 aa9.04□□□□□ -0.96
GYPC-203ENST00000409836 COX7A2LO14548 114 aa9.04□□□□□ -0.96
GYPC-203ENST00000409836 SLPIP03973 132 aa9.04□□□□□ -0.96
GYPC-203ENST00000409836 CIRBPQ14011 172 aaKnown RBP9.04□□□□□ -0.96
GYPC-203ENST00000409836 ERASQ7Z444 233 aa9.04□□□□□ -0.96
GYPC-203ENST00000409836 URB1-AS1Q96HZ7 61 aa9.04□□□□□ -0.96
GYPC-203ENST00000409836 KRTAP17-1Q9BYP8 105 aa9.04□□□□□ -0.96
GYPC-203ENST00000409836 FAM30AQ9NZY2 134 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms