RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TGIF2-C20orf24A0A0A6YYL0 155 aa14.73□□□□□ -0.05
PTCD3-203ENST00000409783 MAP1LC3AQ9H492 121 aa14.73□□□□□ -0.05
PTCD3-203ENST00000409783 CDC42SE2Q9NRR3 84 aa14.73□□□□□ -0.05
PTCD3-203ENST00000409783 KIAA1109Q2LD37 5005 aa14.73□□□□□ -0.05
PTCD3-203ENST00000409783 LOC389332A0A1B0GUA5 103 aa14.72□□□□□ -0.05
PTCD3-203ENST00000409783 CDPF1Q6NVV7 123 aa14.72□□□□□ -0.05
PTCD3-203ENST00000409783 OR5A1Q8NGJ0 315 aa14.72□□□□□ -0.05
PTCD3-203ENST00000409783 TMEM101Q96IK0 257 aa14.72□□□□□ -0.05
PTCD3-203ENST00000409783 YPEL4Q96NS1 127 aa14.72□□□□□ -0.05
PTCD3-203ENST00000409783 CSDC2Q9Y534 153 aaKnown RBP14.72□□□□□ -0.05
PTCD3-203ENST00000409783 Q8N8P6 123 aa14.71□□□□□ -0.05
PTCD3-203ENST00000409783 TIMM21Q9BVV7 248 aa14.71□□□□□ -0.05
PTCD3-203ENST00000409783 MT-ND6P03923 174 aa14.7□□□□□ -0.06
PTCD3-203ENST00000409783 RPL39P62891 51 aaKnown RBP14.7□□□□□ -0.06
PTCD3-203ENST00000409783 ZNF664Q8N3J9 261 aa14.69□□□□□ -0.06
PTCD3-203ENST00000409783 NTN5Q8WTR8 489 aaPredicted RBP14.69□□□□□ -0.06
PTCD3-203ENST00000409783 FAM104AQ969W3 186 aa14.69□□□□□ -0.06
PTCD3-203ENST00000409783 IGKV3OR2-268A0A0C4DH90 116 aa14.68□□□□□ -0.06
PTCD3-203ENST00000409783 TMEM18Q96B42 140 aa14.68□□□□□ -0.06
PTCD3-203ENST00000409783 ALKBH7Q9BT30 221 aaPredicted RBP14.68□□□□□ -0.06
PTCD3-203ENST00000409783 MRPL18Q9H0U6 180 aaKnown RBP14.68□□□□□ -0.06
PTCD3-203ENST00000409783 RAB5AP20339 215 aa14.67□□□□□ -0.06
PTCD3-203ENST00000409783 USP17L23D6RBM5 183 aa14.66□□□□□ -0.06
PTCD3-203ENST00000409783 IFI27P40305 119 aaPredicted RBP14.66□□□□□ -0.06
PTCD3-203ENST00000409783 SMAGPQ0VAQ4 97 aa14.66□□□□□ -0.06
PTCD3-203ENST00000409783 DGAT2L7PQ6IED9 249 aa14.66□□□□□ -0.06
PTCD3-203ENST00000409783 CHCHD10Q8WYQ3 142 aaPredicted RBP14.66□□□□□ -0.06
PTCD3-203ENST00000409783 APOBP04114 4563 aaKnown RBP14.65□□□□□ -0.06
PTCD3-203ENST00000409783 LINC00959A0A1B0GUT2 108 aa14.65□□□□□ -0.06
PTCD3-203ENST00000409783 FABP9Q0Z7S8 132 aa14.65□□□□□ -0.06
PTCD3-203ENST00000409783 Q6ZUT4 128 aa14.65□□□□□ -0.06
PTCD3-203ENST00000409783 NXT2Q9NPJ8 142 aaKnown RBP14.65□□□□□ -0.06
PTCD3-203ENST00000409783 RYR1P21817 5038 aa14.64□□□□□ -0.07
PTCD3-203ENST00000409783 IGLV5-52A0A0A0MRZ9 124 aa14.64□□□□□ -0.07
PTCD3-203ENST00000409783 SPANXA1Q9NS26 97 aa14.64□□□□□ -0.07
PTCD3-203ENST00000409783 HERC2O95714 4834 aa14.63□□□□□ -0.07
PTCD3-203ENST00000409783 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.63□□□□□ -0.07
PTCD3-203ENST00000409783 GAGE12HA6NDE8 117 aa14.63□□□□□ -0.07
PTCD3-203ENST00000409783 K7EMI3 77 aa14.63□□□□□ -0.07
PTCD3-203ENST00000409783 KRTAP10-1P60331 282 aa14.63□□□□□ -0.07
PTCD3-203ENST00000409783 RNASE13Q5GAN3 156 aaKnown RBP14.63□□□□□ -0.07
PTCD3-203ENST00000409783 CBLN2Q8IUK8 224 aa14.63□□□□□ -0.07
PTCD3-203ENST00000409783 OPRPNQ99935 248 aaPredicted RBP14.62□□□□□ -0.07
PTCD3-203ENST00000409783 TRAPPC1Q9Y5R8 145 aa14.62□□□□□ -0.07
PTCD3-203ENST00000409783 PRSS1P07477 247 aa14.61□□□□□ -0.07
PTCD3-203ENST00000409783 GCSHP23434 173 aa14.61□□□□□ -0.07
PTCD3-203ENST00000409783 MRPS36P82909 103 aaKnown RBP14.61□□□□□ -0.07
PTCD3-203ENST00000409783 C14orf177Q52M58 125 aa14.61□□□□□ -0.07
PTCD3-203ENST00000409783 ORMDL2Q53FV1 153 aa14.61□□□□□ -0.07
PTCD3-203ENST00000409783 SMCO4Q9NRQ5 59 aa14.61□□□□□ -0.07
PTCD3-203ENST00000409783 PYGO1Q9Y3Y4 419 aa14.61□□□□□ -0.07
PTCD3-203ENST00000409783 FOXI1Q12951 378 aa14.6□□□□□ -0.07
PTCD3-203ENST00000409783 DNAH8Q96JB1 4490 aa14.6□□□□□ -0.07
PTCD3-203ENST00000409783 LINC01546A6NGU7 62 aa14.59□□□□□ -0.07
PTCD3-203ENST00000409783 CCL25O15444 150 aa14.59□□□□□ -0.07
PTCD3-203ENST00000409783 C2orf66Q6UXQ4 117 aa14.59□□□□□ -0.07
PTCD3-203ENST00000409783 CDK2AP2O75956 126 aa14.58□□□□□ -0.08
PTCD3-203ENST00000409783 XCL1P47992 114 aa14.58□□□□□ -0.08
PTCD3-203ENST00000409783 SS18Q15532 418 aa14.58□□□□□ -0.08
PTCD3-203ENST00000409783 CYSLTR1Q9Y271 337 aa14.58□□□□□ -0.08
PTCD3-203ENST00000409783 HSPG2P98160 4391 aa14.57□□□□□ -0.08
PTCD3-203ENST00000409783 C15orf56Q8N910 161 aa14.57□□□□□ -0.08
PTCD3-203ENST00000409783 PRSS3P2Q8NHM4 247 aa14.57□□□□□ -0.08
PTCD3-203ENST00000409783 IGLV4-3A0A075B6K6 122 aa14.56□□□□□ -0.08
PTCD3-203ENST00000409783 CD164L2Q6UWJ8 174 aa14.56□□□□□ -0.08
PTCD3-203ENST00000409783 TRAV13-1A0A0B4J241 112 aa14.55□□□□□ -0.08
PTCD3-203ENST00000409783 C1orf196B1AJZ1 125 aa14.55□□□□□ -0.08
PTCD3-203ENST00000409783 IGIPA6NJ69 53 aa14.54□□□□□ -0.08
PTCD3-203ENST00000409783 C18orf32Q8TCD1 76 aa14.54□□□□□ -0.08
PTCD3-203ENST00000409783 LINC01620Q4KN68 170 aa14.53□□□□□ -0.08
PTCD3-203ENST00000409783 URB1-AS1Q96HZ7 61 aa14.53□□□□□ -0.08
PTCD3-203ENST00000409783 TOMM6Q96B49 74 aa14.52□□□□□ -0.09
PTCD3-203ENST00000409783 SLPIP03973 132 aa14.51□□□□□ -0.09
PTCD3-203ENST00000409783 LINC00173Q6ZV60 143 aa14.51□□□□□ -0.09
PTCD3-203ENST00000409783 TMEM141Q96I45 108 aa14.51□□□□□ -0.09
PTCD3-203ENST00000409783 hDV102S1A0JD36 115 aa14.5□□□□□ -0.09
PTCD3-203ENST00000409783 NPSP0C0P6 89 aa14.5□□□□□ -0.09
PTCD3-203ENST00000409783 G0S2P27469 103 aa14.5□□□□□ -0.09
PTCD3-203ENST00000409783 XGP55808 180 aa14.5□□□□□ -0.09
PTCD3-203ENST00000409783 CFAP161Q6P656 301 aa14.5□□□□□ -0.09
PTCD3-203ENST00000409783 FAM30AQ9NZY2 134 aa14.5□□□□□ -0.09
PTCD3-203ENST00000409783 GVQW2A0A096LPI5 108 aaPredicted RBP14.49□□□□□ -0.09
PTCD3-203ENST00000409783 IFITM10A6NMD0 228 aa14.49□□□□□ -0.09
PTCD3-203ENST00000409783 CNBPP62633 177 aaKnown RBP14.49□□□□□ -0.09
PTCD3-203ENST00000409783 ZC2HC1BQ5TFG8 222 aa14.49□□□□□ -0.09
PTCD3-203ENST00000409783 FA2HQ7L5A8 372 aa14.49□□□□□ -0.09
PTCD3-203ENST00000409783 AMELXQ99217 191 aa14.49□□□□□ -0.09
PTCD3-203ENST00000409783 KRTAP17-1Q9BYP8 105 aa14.49□□□□□ -0.09
PTCD3-203ENST00000409783 TIMM17AQ99595 171 aa14.48□□□□□ -0.09
PTCD3-203ENST00000409783 COLCA2A8K830 154 aa14.47□□□□□ -0.09
PTCD3-203ENST00000409783 HIGD2BQ4VC39 106 aa14.47□□□□□ -0.09
PTCD3-203ENST00000409783 Q6ZSA8 131 aa14.47□□□□□ -0.09
PTCD3-203ENST00000409783 C9orf163Q8N9P6 203 aa14.47□□□□□ -0.09
PTCD3-203ENST00000409783 IGHV3OR16-9A0A0B4J2B5 98 aa14.46□□□□□ -0.09
PTCD3-203ENST00000409783 IGHV1-58A0A0C4DH39 117 aa14.46□□□□□ -0.09
PTCD3-203ENST00000409783 TEX43Q6ZNM6 134 aa14.46□□□□□ -0.09
PTCD3-203ENST00000409783 ERASQ7Z444 233 aa14.46□□□□□ -0.09
PTCD3-203ENST00000409783 AP5S1Q9NUS5 200 aa14.46□□□□□ -0.09
PTCD3-203ENST00000409783 A0A096LNJ9 63 aa14.45□□□□□ -0.1
PTCD3-203ENST00000409783 COX7A2LO14548 114 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms