RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 RBMY1DP0C7P1 496 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-202ENST00000409478 RBMY1A1P0DJD3 496 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-202ENST00000409478 RBMY1CP0DJD4 496 aa4.25□□□□□ -1.73
R3HDM1-202ENST00000409478 RBMY1FQ15415 496 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-202ENST00000409478 TMEM243Q9BU79 118 aa4.25□□□□□ -1.73
R3HDM1-202ENST00000409478 RHPN1-AS1Q9BWJ2 59 aa4.25□□□□□ -1.73
R3HDM1-202ENST00000409478 PRRC2AP48634 2157 aaKnown RBP4.25□□□□□ -1.73
R3HDM1-202ENST00000409478 ZZEF1O43149 2961 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 TRAV12-2A0A075B6T6 113 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 H0YGX0 51 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 CRPP02741 224 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 CHCHD7Q9BUK0 85 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 EPM2AB3EWF7 344 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 SOSTDC1Q6X4U4 206 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 ARHGAP32A7KAX9 2087 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 CFAP47Q6ZTR5 3102 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 IGKV3-7A0A075B6H7 116 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 RS1O15537 224 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 GHRHP01286 108 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 C5orf56Q8N8D9 126 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 USMG5Q96IX5 58 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 CCL21O00585 134 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 C19orf54Q5BKX5 351 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 PIMREGQ9BSJ6 248 aa4.24□□□□□ -1.73
R3HDM1-202ENST00000409478 H3BUA1 57 aa4.23□□□□□ -1.73
R3HDM1-202ENST00000409478 DSPP15924 2871 aaKnown RBP4.23□□□□□ -1.73
R3HDM1-202ENST00000409478 TRBV12-3P01733 135 aa4.23□□□□□ -1.73
R3HDM1-202ENST00000409478 FAM19A3Q7Z5A8 133 aa4.23□□□□□ -1.73
R3HDM1-202ENST00000409478 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-202ENST00000409478 TRBV10-3A0A0K0K1G6 114 aa4.23□□□□□ -1.73
R3HDM1-202ENST00000409478 A0A0U1RRA0 63 aa4.23□□□□□ -1.73
R3HDM1-202ENST00000409478 IGKV2-29A2NJV5 120 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-202ENST00000409478 BCE1O60756 84 aa4.23□□□□□ -1.73
R3HDM1-202ENST00000409478 DGAT2L7PQ6IED9 249 aa4.23□□□□□ -1.73
R3HDM1-202ENST00000409478 ZNF625Q96I27 306 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-202ENST00000409478 SIRPDQ9H106 197 aa4.23□□□□□ -1.73
R3HDM1-202ENST00000409478 ZFHX4Q86UP3 3567 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 USP9YO00507 2555 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 J3QLI3 93 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 PRB1P04280 392 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 MOB4Q9Y3A3 225 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 ZNF292O60281 2723 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 HIVEP3Q5T1R4 2406 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 JMJD1CQ15652 2540 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 SPENQ96T58 3664 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 POLQO75417 2590 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 NAV2Q8IVL1 2488 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 HOXD3P31249 432 aaPredicted RBP4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 LINC00467Q9BRT7 94 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 C1orf43Q9BWL3 253 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 CCKP06307 115 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 SNRPD3P62318 126 aaKnown RBP4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 PIK3CD-AS1Q5SR53 167 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 LINC00336Q6ZUF6 198 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 CENPEQ02224 2701 aa4.22□□□□□ -1.73
R3HDM1-202ENST00000409478 A0A087WYN8 130 aa4.21□□□□□ -1.73
R3HDM1-202ENST00000409478 SMIM1B2RUZ4 78 aa4.21□□□□□ -1.73
R3HDM1-202ENST00000409478 K7EMT4 169 aa4.21□□□□□ -1.73
R3HDM1-202ENST00000409478 SAA4P35542 130 aa4.21□□□□□ -1.73
R3HDM1-202ENST00000409478 XCL1P47992 114 aa4.21□□□□□ -1.73
R3HDM1-202ENST00000409478 XCL2Q9UBD3 114 aa4.21□□□□□ -1.73
R3HDM1-202ENST00000409478 SETD2Q9BYW2 2564 aaPredicted RBP4.21□□□□□ -1.74
R3HDM1-202ENST00000409478 SMIM26A0A096LP01 95 aa4.21□□□□□ -1.74
R3HDM1-202ENST00000409478 KNCNA6PVL3 124 aa4.21□□□□□ -1.74
R3HDM1-202ENST00000409478 DMDP11532 3685 aa4.21□□□□□ -1.74
R3HDM1-202ENST00000409478 COX6A2Q02221 97 aa4.21□□□□□ -1.74
R3HDM1-202ENST00000409478 C20orf197Q8N268 126 aa4.21□□□□□ -1.74
R3HDM1-202ENST00000409478 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.21□□□□□ -1.74
R3HDM1-202ENST00000409478 DCHS1Q96JQ0 3298 aa4.21□□□□□ -1.74
R3HDM1-202ENST00000409478 IGHV3-73A0A0B4J1V6 119 aa4.21□□□□□ -1.74
R3HDM1-202ENST00000409478 JMJD7-PLA2G4BH0Y9G9 81 aa4.21□□□□□ -1.74
R3HDM1-202ENST00000409478 LINC00242Q5T6M2 205 aa4.21□□□□□ -1.74
R3HDM1-202ENST00000409478 ORMDL1Q9P0S3 153 aa4.21□□□□□ -1.74
R3HDM1-202ENST00000409478 SMG1Q96Q15 3661 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-202ENST00000409478 C9orf129Q5T035 196 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-202ENST00000409478 NCR3O14931 201 aa4.2□□□□□ -1.74
R3HDM1-202ENST00000409478 SPINK13Q1W4C9 94 aa4.2□□□□□ -1.74
R3HDM1-202ENST00000409478 LYPD5Q6UWN5 251 aa4.2□□□□□ -1.74
R3HDM1-202ENST00000409478 SMIM11BQ8TCY0 68 aa4.2□□□□□ -1.74
R3HDM1-202ENST00000409478 SND1-IT1Q9HBX3 110 aa4.2□□□□□ -1.74
R3HDM1-202ENST00000409478 ABCA12Q86UK0 2595 aa4.2□□□□□ -1.74
R3HDM1-202ENST00000409478 TRAV23DV6A0A075B6W5 121 aa4.2□□□□□ -1.74
R3HDM1-202ENST00000409478 IGHV3OR16-12A0A075B7B8 117 aa4.2□□□□□ -1.74
R3HDM1-202ENST00000409478 LY6HO94772 140 aa4.2□□□□□ -1.74
R3HDM1-202ENST00000409478 ZFP36P26651 326 aaKnown RBP4.2□□□□□ -1.74
R3HDM1-202ENST00000409478 LINC00337Q8N6G1 96 aa4.2□□□□□ -1.74
R3HDM1-202ENST00000409478 H7BZZ5 65 aa4.19□□□□□ -1.74
R3HDM1-202ENST00000409478 LECT2O14960 151 aa4.19□□□□□ -1.74
R3HDM1-202ENST00000409478 IGKV3-20P01619 116 aa4.19□□□□□ -1.74
R3HDM1-202ENST00000409478 IGHV3-11P01762 117 aa4.19□□□□□ -1.74
R3HDM1-202ENST00000409478 TRAV7A0A075B6U4 112 aa4.19□□□□□ -1.74
R3HDM1-202ENST00000409478 PROK1P58294 105 aa4.19□□□□□ -1.74
R3HDM1-202ENST00000409478 HILS1P60008 231 aa4.19□□□□□ -1.74
R3HDM1-202ENST00000409478 UBL5Q9BZL1 73 aa4.19□□□□□ -1.74
R3HDM1-202ENST00000409478 DMXL1Q9Y485 3027 aa4.19□□□□□ -1.74
R3HDM1-202ENST00000409478 IGKV2-28A0A075B6P5 120 aa4.19□□□□□ -1.74
R3HDM1-202ENST00000409478 IGKV2D-28P01615 120 aa4.19□□□□□ -1.74
R3HDM1-202ENST00000409478 KLKP1Q107X0 134 aa4.19□□□□□ -1.74
R3HDM1-202ENST00000409478 TMEM86BQ8N661 226 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms