RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 IGLV2-18A0A075B6J9 118 aa10.28□□□□□ -0.76
RUNX3-203ENST00000399916 PRR4Q16378 134 aa10.28□□□□□ -0.76
RUNX3-203ENST00000399916 LINC00308Q8TCZ7 52 aa10.28□□□□□ -0.76
RUNX3-203ENST00000399916 COX7B2Q8TF08 81 aa10.28□□□□□ -0.76
RUNX3-203ENST00000399916 IGHV7-4-1A0A0J9YVY3 117 aa10.28□□□□□ -0.76
RUNX3-203ENST00000399916 UBE2E2Q96LR5 201 aa10.28□□□□□ -0.76
RUNX3-203ENST00000399916 CRYGAP11844 174 aa10.27□□□□□ -0.76
RUNX3-203ENST00000399916 IGFL3Q6UXB1 125 aa10.27□□□□□ -0.76
RUNX3-203ENST00000399916 SMAD5-AS1Q9Y6J3 95 aa10.27□□□□□ -0.76
RUNX3-203ENST00000399916 FAM223BA6NKX1 122 aa10.27□□□□□ -0.77
RUNX3-203ENST00000399916 IGLV1-47P01700 117 aa10.27□□□□□ -0.77
RUNX3-203ENST00000399916 CXCL5P42830 114 aa10.27□□□□□ -0.77
RUNX3-203ENST00000399916 IGLV11-55A0A075B6I3 123 aa10.27□□□□□ -0.77
RUNX3-203ENST00000399916 FAM19A1Q7Z5A9 133 aa10.27□□□□□ -0.77
RUNX3-203ENST00000399916 IGLV4-3A0A075B6K6 122 aa10.26□□□□□ -0.77
RUNX3-203ENST00000399916 IGHV4-4A0A075B6R2 117 aa10.26□□□□□ -0.77
RUNX3-203ENST00000399916 C5orf38Q86SI9 138 aa10.26□□□□□ -0.77
RUNX3-203ENST00000399916 HIST2H2BCQ6DN03 193 aa10.26□□□□□ -0.77
RUNX3-203ENST00000399916 HIST2H2BDQ6DRA6 164 aa10.26□□□□□ -0.77
RUNX3-203ENST00000399916 SBSPONQ8IVN8 264 aa10.26□□□□□ -0.77
RUNX3-203ENST00000399916 ATMQ13315 3056 aa10.26□□□□□ -0.77
RUNX3-203ENST00000399916 RPS28P62857 69 aaKnown RBP10.26□□□□□ -0.77
RUNX3-203ENST00000399916 PRR9Q5T870 116 aa10.26□□□□□ -0.77
RUNX3-203ENST00000399916 MRGPRG-AS1Q2M3A8 158 aa10.25□□□□□ -0.77
RUNX3-203ENST00000399916 IGFL2Q6UWQ7 119 aa10.25□□□□□ -0.77
RUNX3-203ENST00000399916 CFHR3Q02985 330 aa10.25□□□□□ -0.77
RUNX3-203ENST00000399916 ZNF672Q499Z4 452 aaPredicted RBP10.25□□□□□ -0.77
RUNX3-203ENST00000399916 XCL1P47992 114 aa10.25□□□□□ -0.77
RUNX3-203ENST00000399916 VSIG2Q96IQ7 327 aa10.25□□□□□ -0.77
RUNX3-203ENST00000399916 C20orf173Q96LM9 149 aa10.25□□□□□ -0.77
RUNX3-203ENST00000399916 XCL2Q9UBD3 114 aa10.25□□□□□ -0.77
RUNX3-203ENST00000399916 COX6B1P14854 86 aa10.24□□□□□ -0.77
RUNX3-203ENST00000399916 LINC00846Q9NV44 126 aa10.24□□□□□ -0.77
RUNX3-203ENST00000399916 PKD1L2Q7Z442 2459 aa10.24□□□□□ -0.77
RUNX3-203ENST00000399916 BRD3OSQ6XYD6 125 aa10.24□□□□□ -0.77
RUNX3-203ENST00000399916 IGHV4-28A0A0C4DH34 117 aa10.24□□□□□ -0.77
RUNX3-203ENST00000399916 CRYGDP07320 174 aa10.24□□□□□ -0.77
RUNX3-203ENST00000399916 RMI2Q96E14 147 aa10.24□□□□□ -0.77
RUNX3-203ENST00000399916 SERP1Q9Y6X1 66 aa10.24□□□□□ -0.77
RUNX3-203ENST00000399916 IGIPA6NJ69 53 aa10.23□□□□□ -0.77
RUNX3-203ENST00000399916 H0YGX0 51 aa10.23□□□□□ -0.77
RUNX3-203ENST00000399916 CLPSL2Q6UWE3 100 aa10.23□□□□□ -0.77
RUNX3-203ENST00000399916 KAAG1Q9UBP8 84 aa10.23□□□□□ -0.77
RUNX3-203ENST00000399916 TNFRSF13BO14836 293 aaPredicted RBP10.23□□□□□ -0.77
RUNX3-203ENST00000399916 C9orf47Q6ZRZ4 202 aa10.23□□□□□ -0.77
RUNX3-203ENST00000399916 SMCR5Q8TEV8 140 aa10.21□□□□□ -0.77
RUNX3-203ENST00000399916 IGHV1-69P01742 117 aa10.21□□□□□ -0.77
RUNX3-203ENST00000399916 IL17DQ8TAD2 202 aa10.21□□□□□ -0.77
RUNX3-203ENST00000399916 PRORYQ9H606 182 aa10.21□□□□□ -0.77
RUNX3-203ENST00000399916 HOXB4P17483 251 aaPredicted RBP10.21□□□□□ -0.78
RUNX3-203ENST00000399916 PROK1P58294 105 aa10.21□□□□□ -0.78
RUNX3-203ENST00000399916 FAM110DQ8TAY7 271 aaPredicted RBP10.21□□□□□ -0.78
RUNX3-203ENST00000399916 CNFNQ9BYD5 112 aa10.21□□□□□ -0.78
RUNX3-203ENST00000399916 TRGV4A0A0C4DH28 118 aa10.2□□□□□ -0.78
RUNX3-203ENST00000399916 DEFB131AP59861 70 aa10.19□□□□□ -0.78
RUNX3-203ENST00000399916 ABCA2Q9BZC7 2435 aa10.19□□□□□ -0.78
RUNX3-203ENST00000399916 TRBV27A0A0K0K1C4 114 aa10.19□□□□□ -0.78
RUNX3-203ENST00000399916 TSHBP01222 138 aa10.19□□□□□ -0.78
RUNX3-203ENST00000399916 GNLYP22749 145 aa10.19□□□□□ -0.78
RUNX3-203ENST00000399916 FUSP35637 526 aaKnown RBP eCLIP10.19□□□□□ -0.78
RUNX3-203ENST00000399916 BLCAPP62952 87 aa10.19□□□□□ -0.78
RUNX3-203ENST00000399916 PMAIP1Q13794 54 aa10.19□□□□□ -0.78
RUNX3-203ENST00000399916 PSPHP1O15172 72 aa10.19□□□□□ -0.78
RUNX3-203ENST00000399916 EBI3Q14213 229 aa10.19□□□□□ -0.78
RUNX3-203ENST00000399916 SS18Q15532 418 aa10.19□□□□□ -0.78
RUNX3-203ENST00000399916 SAA4P35542 130 aa10.18□□□□□ -0.78
RUNX3-203ENST00000399916 NANOS2P60321 138 aaKnown RBP10.18□□□□□ -0.78
RUNX3-203ENST00000399916 CCDC168Q8NDH2 2452 aa10.18□□□□□ -0.78
RUNX3-203ENST00000399916 IGHV7-81A0A0B4J1V7 117 aa10.18□□□□□ -0.78
RUNX3-203ENST00000399916 LENEPQ9Y5L5 61 aa10.18□□□□□ -0.78
RUNX3-203ENST00000399916 CLPSL1A2RUU4 121 aa10.18□□□□□ -0.78
RUNX3-203ENST00000399916 Q6JHZ5 121 aa10.18□□□□□ -0.78
RUNX3-203ENST00000399916 UNQ9165/PRO28630Q6UXU0 137 aa10.18□□□□□ -0.78
RUNX3-203ENST00000399916 FHL2Q14192 279 aa10.17□□□□□ -0.78
RUNX3-203ENST00000399916 POLR2KP53803 58 aaKnown RBP10.17□□□□□ -0.78
RUNX3-203ENST00000399916 MINOS1Q5TGZ0 78 aa10.17□□□□□ -0.78
RUNX3-203ENST00000399916 MRPL53Q96EL3 112 aaKnown RBP10.17□□□□□ -0.78
RUNX3-203ENST00000399916 C2orf48Q96LS8 159 aa10.17□□□□□ -0.78
RUNX3-203ENST00000399916 SMG1Q96Q15 3661 aaKnown RBP10.17□□□□□ -0.78
RUNX3-203ENST00000399916 JMJD7-PLA2G4BH0Y9G9 81 aa10.17□□□□□ -0.78
RUNX3-203ENST00000399916 GRNP28799 593 aaKnown RBP10.17□□□□□ -0.78
RUNX3-203ENST00000399916 MAP1AP78559 2803 aaPredicted RBP10.17□□□□□ -0.78
RUNX3-203ENST00000399916 A0A1W2PRX2 142 aa10.16□□□□□ -0.78
RUNX3-203ENST00000399916 A0A087WZ39 114 aa10.16□□□□□ -0.78
RUNX3-203ENST00000399916 ZFAND2AQ8N6M9 145 aa10.16□□□□□ -0.78
RUNX3-203ENST00000399916 USP9YO00507 2555 aaPredicted RBP10.16□□□□□ -0.78
RUNX3-203ENST00000399916 LAMA5O15230 3695 aa10.16□□□□□ -0.78
RUNX3-203ENST00000399916 RNASE3P12724 160 aaKnown RBP10.16□□□□□ -0.78
RUNX3-203ENST00000399916 SIRPDQ9H106 197 aa10.16□□□□□ -0.78
RUNX3-203ENST00000399916 USP9XQ93008 2570 aaPredicted RBP10.16□□□□□ -0.78
RUNX3-203ENST00000399916 TRBV7-6A0A0J9YX20 115 aa10.15□□□□□ -0.78
RUNX3-203ENST00000399916 Q8N2B8 174 aa10.15□□□□□ -0.79
RUNX3-203ENST00000399916 C9orf85Q96MD7 179 aa10.15□□□□□ -0.79
RUNX3-203ENST00000399916 LINC00467Q9BRT7 94 aa10.15□□□□□ -0.79
RUNX3-203ENST00000399916 LINC00474Q9P2X8 69 aa10.15□□□□□ -0.79
RUNX3-203ENST00000399916 DOPEY1Q5JWR5 2465 aa10.14□□□□□ -0.79
RUNX3-203ENST00000399916 C11orf44Q8N8P7 122 aa10.14□□□□□ -0.79
RUNX3-203ENST00000399916 PRM2P04554 102 aa10.14□□□□□ -0.79
RUNX3-203ENST00000399916 A0A087WYN8 130 aa10.13□□□□□ -0.79
RUNX3-203ENST00000399916 M0QY20 66 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms