RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 GPHB5Q86YW7 130 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 IMUPQ9GZP8 106 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 LEPROTO15243 131 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 PROK1P58294 105 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 DNAJC30Q96LL9 226 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 MDFICQ9P1T7 246 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 C11orf86A6NJI1 115 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 TMEM141Q96I45 108 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 CELA1Q9UNI1 258 aa3.7□□□□□ -1.82
SMAD4-202ENST00000398417 DEFB130BP0DP73 79 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 DEFB130AP0DP74 79 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 DSCR9P59020 149 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 A0A096LPF7 62 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 LINC01619G3V211 115 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 NEXN-AS1Q8NBZ9 246 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 HIGD1BQ9P298 99 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 XCL2Q9UBD3 114 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 NRACQ8N912 160 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 PRM2P04554 102 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 ACYP1P07311 99 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 RNASE3P12724 160 aaKnown RBP3.69□□□□□ -1.82
SMAD4-202ENST00000398417 CCDC168Q8NDH2 2452 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 IGLV5-39A0A0G2JS06 123 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 C18orf65Q6ZTR6 163 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 PSMG3-AS1Q96PY0 264 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 IGLV2-18A0A075B6J9 118 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 P0DMU3 169 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 FAM231AP0DMU4 169 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 FAM231CP0DMU5 169 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 SCXQ7RTU7 201 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 MYO9AB2RTY4 2548 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 IGKV4-1P06312 121 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 LENEPQ9Y5L5 61 aa3.69□□□□□ -1.82
SMAD4-202ENST00000398417 IGHV4-4A0A075B6R2 117 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.68□□□□□ -1.82
SMAD4-202ENST00000398417 IGKV2-29A2NJV5 120 aaPredicted RBP3.68□□□□□ -1.82
SMAD4-202ENST00000398417 SMIM1B2RUZ4 78 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 MED14OSP0DP75 135 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 COX8CQ7Z4L0 72 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 PTH2Q96A98 100 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 SOCS3O14543 225 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 SHISA2Q6UWI4 295 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 TRAV26-1A0A087WT03 109 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 HHLA3Q9XRX5 114 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 A0A087WZ39 114 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 ZNF561-AS1K7EIQ3 104 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 K7EMT4 169 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 Q6ZVQ6 151 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 NDUFV3P56181 108 aaKnown RBP3.68□□□□□ -1.82
SMAD4-202ENST00000398417 RPL18AQ02543 176 aaKnown RBP3.68□□□□□ -1.82
SMAD4-202ENST00000398417 HIGD2AQ9BW72 106 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 I3L3M4 83 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 OVOL2Q9BRP0 275 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 A0A0J9YX75 114 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 A0A0J9YXY3 114 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 CRYBA4P53673 196 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 FHL2Q14192 279 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 C6orf226Q5I0X4 101 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 WFDC10AQ9H1F0 79 aa3.68□□□□□ -1.82
SMAD4-202ENST00000398417 DAZ4Q86SG3 579 aaKnown RBP3.67□□□□□ -1.82
SMAD4-202ENST00000398417 SS18Q15532 418 aa3.67□□□□□ -1.82
SMAD4-202ENST00000398417 ZFYVE26Q68DK2 2539 aa3.67□□□□□ -1.82
SMAD4-202ENST00000398417 IGLV1-40P01703 118 aa3.67□□□□□ -1.82
SMAD4-202ENST00000398417 RPL36AP83881 106 aaKnown RBP3.67□□□□□ -1.82
SMAD4-202ENST00000398417 DSCR8Q96T75 97 aa3.67□□□□□ -1.82
SMAD4-202ENST00000398417 A8MZ25 164 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 IL17DQ8TAD2 202 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 IGHV4-28A0A0C4DH34 117 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 C9JAW5 83 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 CRIP2P52943 208 aaPredicted RBP3.66□□□□□ -1.82
SMAD4-202ENST00000398417 UFSP1Q6NVU6 142 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 FOXI2Q6ZQN5 318 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 K7EQG2 157 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 C20orf203Q8NBC4 194 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 TRBV7-3A0A075B6L6 115 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 LGALS9O00182 355 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 APOC4P55056 127 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 NFE4Q86UQ8 179 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 PFN2P35080 140 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 KRTAP10-9P60411 292 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 MRPS36P82909 103 aaKnown RBP3.66□□□□□ -1.82
SMAD4-202ENST00000398417 NTN5Q8WTR8 489 aaPredicted RBP3.66□□□□□ -1.82
SMAD4-202ENST00000398417 ZNF702PQ9H963 129 aa3.66□□□□□ -1.82
SMAD4-202ENST00000398417 PSMB8P28062 276 aa3.65□□□□□ -1.82
SMAD4-202ENST00000398417 TSPEAR-AS2P59090 65 aa3.65□□□□□ -1.82
SMAD4-202ENST00000398417 FAM110AQ9BQ89 295 aa3.65□□□□□ -1.82
SMAD4-202ENST00000398417 TM2D2Q9BX73 214 aa3.65□□□□□ -1.82
SMAD4-202ENST00000398417 NDUFA12Q9UI09 145 aa3.65□□□□□ -1.82
SMAD4-202ENST00000398417 CFC1BP0CG36 223 aa3.65□□□□□ -1.82
SMAD4-202ENST00000398417 CFC1P0CG37 223 aa3.65□□□□□ -1.82
SMAD4-202ENST00000398417 ZNF22P17026 224 aaPredicted RBP3.65□□□□□ -1.82
SMAD4-202ENST00000398417 LRBAP50851 2863 aa3.65□□□□□ -1.82
SMAD4-202ENST00000398417 TCL1BO95988 128 aa3.65□□□□□ -1.82
SMAD4-202ENST00000398417 Q9HAA7 133 aa3.65□□□□□ -1.82
SMAD4-202ENST00000398417 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
SMAD4-202ENST00000398417 COX7A2LO14548 114 aa3.65□□□□□ -1.83
SMAD4-202ENST00000398417 HERVK_113P63121 156 aa3.65□□□□□ -1.83
SMAD4-202ENST00000398417 UBL5Q9BZL1 73 aa3.65□□□□□ -1.83
SMAD4-202ENST00000398417 VPREB3Q9UKI3 123 aa3.65□□□□□ -1.83
SMAD4-202ENST00000398417 TSHBP01222 138 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms