RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 Q6Q795 121 aa14.42□□□□□ -0.1
AGAP3-202ENST00000397238 YAE1D1Q9NRH1 226 aa14.42□□□□□ -0.1
AGAP3-202ENST00000397238 COX6A2Q02221 97 aa14.42□□□□□ -0.1
AGAP3-202ENST00000397238 CCDC168Q8NDH2 2452 aa14.42□□□□□ -0.1
AGAP3-202ENST00000397238 IGHV3OR16-12A0A075B7B8 117 aa14.41□□□□□ -0.1
AGAP3-202ENST00000397238 TMEM101Q96IK0 257 aa14.41□□□□□ -0.1
AGAP3-202ENST00000397238 FAM236AA0A1B0GUQ0 79 aa14.41□□□□□ -0.1
AGAP3-202ENST00000397238 FAM236BA0A1B0GV22 79 aa14.41□□□□□ -0.1
AGAP3-202ENST00000397238 PSMB8P28062 276 aa14.41□□□□□ -0.1
AGAP3-202ENST00000397238 SHISA2Q6UWI4 295 aa14.41□□□□□ -0.1
AGAP3-202ENST00000397238 CITED2Q99967 270 aaPredicted RBP14.41□□□□□ -0.1
AGAP3-202ENST00000397238 TRAV13-1A0A0B4J241 112 aa14.41□□□□□ -0.1
AGAP3-202ENST00000397238 CIRBPQ14011 172 aaKnown RBP14.41□□□□□ -0.1
AGAP3-202ENST00000397238 BRI3O95415 125 aa14.4□□□□□ -0.1
AGAP3-202ENST00000397238 Q8N2B8 174 aa14.4□□□□□ -0.1
AGAP3-202ENST00000397238 LINC01587Q99440 93 aa14.39□□□□□ -0.11
AGAP3-202ENST00000397238 HOXD3P31249 432 aaPredicted RBP14.38□□□□□ -0.11
AGAP3-202ENST00000397238 CFHR3Q02985 330 aa14.38□□□□□ -0.11
AGAP3-202ENST00000397238 USP24Q9UPU5 2620 aa14.38□□□□□ -0.11
AGAP3-202ENST00000397238 LINC00308Q8TCZ7 52 aa14.37□□□□□ -0.11
AGAP3-202ENST00000397238 SETD2Q9BYW2 2564 aaPredicted RBP14.37□□□□□ -0.11
AGAP3-202ENST00000397238 MSMBP08118 114 aa14.37□□□□□ -0.11
AGAP3-202ENST00000397238 DEFB112Q30KQ8 113 aa14.37□□□□□ -0.11
AGAP3-202ENST00000397238 SPANXA1Q9NS26 97 aa14.36□□□□□ -0.11
AGAP3-202ENST00000397238 IGHV3-53P01767 116 aa14.36□□□□□ -0.11
AGAP3-202ENST00000397238 C18orf65Q6ZTR6 163 aa14.36□□□□□ -0.11
AGAP3-202ENST00000397238 SLURP1P55000 103 aa14.35□□□□□ -0.11
AGAP3-202ENST00000397238 PRIMA1Q86XR5 153 aa14.35□□□□□ -0.11
AGAP3-202ENST00000397238 C10orf105Q8TEF2 133 aa14.35□□□□□ -0.11
AGAP3-202ENST00000397238 RS1O15537 224 aa14.34□□□□□ -0.11
AGAP3-202ENST00000397238 KHDC1LQ5JSQ8 128 aa14.34□□□□□ -0.11
AGAP3-202ENST00000397238 RBMY1BA6NDE4 496 aaKnown RBP14.34□□□□□ -0.11
AGAP3-202ENST00000397238 RBMY1EA6NEQ0 496 aaKnown RBP14.34□□□□□ -0.11
AGAP3-202ENST00000397238 RBMY1DP0C7P1 496 aaKnown RBP14.34□□□□□ -0.11
AGAP3-202ENST00000397238 DAZ2Q13117 558 aaKnown RBP14.34□□□□□ -0.11
AGAP3-202ENST00000397238 DAZ4Q86SG3 579 aaKnown RBP14.34□□□□□ -0.11
AGAP3-202ENST00000397238 Q9HAA7 133 aa14.34□□□□□ -0.11
AGAP3-202ENST00000397238 DAZ3Q9NR90 486 aaKnown RBP14.34□□□□□ -0.11
AGAP3-202ENST00000397238 PIK3CD-AS1Q5SR53 167 aa14.34□□□□□ -0.11
AGAP3-202ENST00000397238 SOSTDC1Q6X4U4 206 aa14.33□□□□□ -0.12
AGAP3-202ENST00000397238 SMCR5Q8TEV8 140 aa14.33□□□□□ -0.12
AGAP3-202ENST00000397238 LINC00694P0DN24 101 aa14.32□□□□□ -0.12
AGAP3-202ENST00000397238 IGKV3OR2-268A0A0C4DH90 116 aa14.32□□□□□ -0.12
AGAP3-202ENST00000397238 NDUFA1O15239 70 aa14.32□□□□□ -0.12
AGAP3-202ENST00000397238 BAALC-AS2P0C853 105 aa14.32□□□□□ -0.12
AGAP3-202ENST00000397238 ZNF415Q09FC8 603 aa14.32□□□□□ -0.12
AGAP3-202ENST00000397238 UBE2E2Q96LR5 201 aa14.31□□□□□ -0.12
AGAP3-202ENST00000397238 LINC01600Q96MT4 127 aa14.3□□□□□ -0.12
AGAP3-202ENST00000397238 XCL2Q9UBD3 114 aa14.3□□□□□ -0.12
AGAP3-202ENST00000397238 JMJD1CQ15652 2540 aa14.3□□□□□ -0.12
AGAP3-202ENST00000397238 COX7A2LO14548 114 aa14.3□□□□□ -0.12
AGAP3-202ENST00000397238 GAGE2AQ6NT46 116 aa14.3□□□□□ -0.12
AGAP3-202ENST00000397238 FAM240AA0A1B0GVK7 77 aa14.3□□□□□ -0.12
AGAP3-202ENST00000397238 LINC00242Q5T6M2 205 aa14.3□□□□□ -0.12
AGAP3-202ENST00000397238 MXRA5Q9NR99 2828 aa14.29□□□□□ -0.12
AGAP3-202ENST00000397238 MRPL23Q16540 153 aaKnown RBP14.28□□□□□ -0.12
AGAP3-202ENST00000397238 FAM218AQ96MZ4 157 aa14.28□□□□□ -0.12
AGAP3-202ENST00000397238 TOMM7Q9P0U1 55 aa14.27□□□□□ -0.12
AGAP3-202ENST00000397238 C9orf153Q5TBE3 101 aa14.27□□□□□ -0.13
AGAP3-202ENST00000397238 FAM110AQ9BQ89 295 aa14.27□□□□□ -0.13
AGAP3-202ENST00000397238 TRGV1A0A0A0MS02 117 aa14.26□□□□□ -0.13
AGAP3-202ENST00000397238 DEFB121Q5J5C9 76 aa14.26□□□□□ -0.13
AGAP3-202ENST00000397238 TRBV7-7A0A0K0K1E9 115 aa14.26□□□□□ -0.13
AGAP3-202ENST00000397238 TIMM17BO60830 172 aa14.26□□□□□ -0.13
AGAP3-202ENST00000397238 CHD6Q8TD26 2715 aa14.25□□□□□ -0.13
AGAP3-202ENST00000397238 FBN2P35556 2912 aa14.25□□□□□ -0.13
AGAP3-202ENST00000397238 HERVK_113P63121 156 aa14.25□□□□□ -0.13
AGAP3-202ENST00000397238 TIRAPP58753 221 aa14.24□□□□□ -0.13
AGAP3-202ENST00000397238 TEX15Q9BXT5 2789 aa14.24□□□□□ -0.13
AGAP3-202ENST00000397238 B4DSR2 109 aa14.24□□□□□ -0.13
AGAP3-202ENST00000397238 KLK5Q9Y337 293 aaPredicted RBP14.24□□□□□ -0.13
AGAP3-202ENST00000397238 SMIM1B2RUZ4 78 aa14.24□□□□□ -0.13
AGAP3-202ENST00000397238 DYNLRB2Q8TF09 96 aa14.22□□□□□ -0.13
AGAP3-202ENST00000397238 BBC3Q96PG8 261 aaPredicted RBP14.22□□□□□ -0.13
AGAP3-202ENST00000397238 PPDPFQ9H3Y8 114 aa14.22□□□□□ -0.13
AGAP3-202ENST00000397238 ACYP1P07311 99 aa14.2□□□□□ -0.14
AGAP3-202ENST00000397238 LINC00643Q86TS7 51 aa14.2□□□□□ -0.14
AGAP3-202ENST00000397238 C11orf72Q8NBR9 251 aa14.2□□□□□ -0.14
AGAP3-202ENST00000397238 TMEM89A2RUT3 159 aa14.2□□□□□ -0.14
AGAP3-202ENST00000397238 EDA2RQ9HAV5 297 aa14.2□□□□□ -0.14
AGAP3-202ENST00000397238 C11orf44Q8N8P7 122 aa14.19□□□□□ -0.14
AGAP3-202ENST00000397238 ACANP16112 2415 aa14.19□□□□□ -0.14
AGAP3-202ENST00000397238 IGLV5-39A0A0G2JS06 123 aa14.19□□□□□ -0.14
AGAP3-202ENST00000397238 IGLV5-45A0A087WSX0 123 aa14.19□□□□□ -0.14
AGAP3-202ENST00000397238 MAP6D1Q9H9H5 199 aa14.19□□□□□ -0.14
AGAP3-202ENST00000397238 ATP5G1P05496 136 aa14.18□□□□□ -0.14
AGAP3-202ENST00000397238 DNAJC30Q96LL9 226 aa14.18□□□□□ -0.14
AGAP3-202ENST00000397238 INSP01308 110 aa14.17□□□□□ -0.14
AGAP3-202ENST00000397238 SDIM1Q6ZPB5 146 aa14.17□□□□□ -0.14
AGAP3-202ENST00000397238 NTM-AS1Q6ZSK4 140 aa14.17□□□□□ -0.14
AGAP3-202ENST00000397238 MIR7-3HGQ8N6C7 128 aa14.17□□□□□ -0.14
AGAP3-202ENST00000397238 Q96MF0 132 aa14.17□□□□□ -0.14
AGAP3-202ENST00000397238 IGKV3D-7A0A0C4DH55 119 aa14.17□□□□□ -0.14
AGAP3-202ENST00000397238 LOC107984640A0A0U1RRK4 108 aa14.17□□□□□ -0.14
AGAP3-202ENST00000397238 KRTAP10-9P60411 292 aa14.17□□□□□ -0.14
AGAP3-202ENST00000397238 Q6ZTI0 123 aa14.17□□□□□ -0.14
AGAP3-202ENST00000397238 NIPBLQ6KC79 2804 aaeCLIP14.16□□□□□ -0.144e-6■□□□□ 10.1
AGAP3-202ENST00000397238 CRPP02741 224 aa14.16□□□□□ -0.14
AGAP3-202ENST00000397238 RPL36AP83881 106 aaKnown RBP14.16□□□□□ -0.14
AGAP3-202ENST00000397238 RPL36ALQ969Q0 106 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms