RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 MAPKAPK5-AS1Q8N8E1 139 aa19.51■□□□□ 0.71
CHCHD4-202ENST00000396914 TRAV8-4A0A0B4J246 113 aa19.5■□□□□ 0.71
CHCHD4-202ENST00000396914 RPL39P62891 51 aaKnown RBP19.5■□□□□ 0.71
CHCHD4-202ENST00000396914 NXT2Q9NPJ8 142 aaKnown RBP19.5■□□□□ 0.71
CHCHD4-202ENST00000396914 KRTAP10-2P60368 255 aa19.49■□□□□ 0.71
CHCHD4-202ENST00000396914 ALKBH7Q9BT30 221 aaPredicted RBP19.49■□□□□ 0.71
CHCHD4-202ENST00000396914 UBE2D4Q9Y2X8 147 aa19.49■□□□□ 0.71
CHCHD4-202ENST00000396914 IFI27P40305 119 aaPredicted RBP19.48■□□□□ 0.71
CHCHD4-202ENST00000396914 ZNF664Q8N3J9 261 aa19.48■□□□□ 0.71
CHCHD4-202ENST00000396914 PRSS3P2Q8NHM4 247 aa19.47■□□□□ 0.71
CHCHD4-202ENST00000396914 CDC42SE2Q9NRR3 84 aa19.47■□□□□ 0.71
CHCHD4-202ENST00000396914 C16orf90A8MZG2 172 aa19.46■□□□□ 0.71
CHCHD4-202ENST00000396914 FUSP35637 526 aaKnown RBP eCLIP19.46■□□□□ 0.71
CHCHD4-202ENST00000396914 WFDC2Q14508 124 aa19.44■□□□□ 0.7
CHCHD4-202ENST00000396914 Q8N814 137 aa19.44■□□□□ 0.7
CHCHD4-202ENST00000396914 YPEL4Q96NS1 127 aa19.44■□□□□ 0.7
CHCHD4-202ENST00000396914 CSDC2Q9Y534 153 aaKnown RBP19.44■□□□□ 0.7
CHCHD4-202ENST00000396914 ORMDL2Q53FV1 153 aa19.43■□□□□ 0.7
CHCHD4-202ENST00000396914 RNASE13Q5GAN3 156 aaKnown RBP19.43■□□□□ 0.7
CHCHD4-202ENST00000396914 TIMM21Q9BVV7 248 aa19.43■□□□□ 0.7
CHCHD4-202ENST00000396914 PGPEP1Q9NXJ5 209 aa19.43■□□□□ 0.7
CHCHD4-202ENST00000396914 SPANXA1Q9NS26 97 aa19.42■□□□□ 0.7
CHCHD4-202ENST00000396914 K7EMI3 77 aa19.41■□□□□ 0.7
CHCHD4-202ENST00000396914 Q6ZUT4 128 aa19.41■□□□□ 0.7
CHCHD4-202ENST00000396914 DNAH11Q96DT5 4516 aa19.4■□□□□ 0.7
CHCHD4-202ENST00000396914 GAGE12HA6NDE8 117 aa19.4■□□□□ 0.7
CHCHD4-202ENST00000396914 KRTAP26-1Q6PEX3 210 aa19.4■□□□□ 0.7
CHCHD4-202ENST00000396914 CHCHD10Q8WYQ3 142 aaPredicted RBP19.4■□□□□ 0.7
CHCHD4-202ENST00000396914 LINC00959A0A1B0GUT2 108 aa19.39■□□□□ 0.69
CHCHD4-202ENST00000396914 SS18Q15532 418 aa19.39■□□□□ 0.69
CHCHD4-202ENST00000396914 CYSLTR1Q9Y271 337 aa19.39■□□□□ 0.69
CHCHD4-202ENST00000396914 IGLV2-33A0A075B6J2 118 aaPredicted RBP19.38■□□□□ 0.69
CHCHD4-202ENST00000396914 IGLV5-52A0A0A0MRZ9 124 aa19.37■□□□□ 0.69
CHCHD4-202ENST00000396914 XCL1P47992 114 aa19.37■□□□□ 0.69
CHCHD4-202ENST00000396914 C2orf66Q6UXQ4 117 aa19.37■□□□□ 0.69
CHCHD4-202ENST00000396914 FA2HQ7L5A8 372 aa19.37■□□□□ 0.69
CHCHD4-202ENST00000396914 OPRPNQ99935 248 aaPredicted RBP19.37■□□□□ 0.69
CHCHD4-202ENST00000396914 USP17L23D6RBM5 183 aa19.36■□□□□ 0.69
CHCHD4-202ENST00000396914 CDPF1Q6NVV7 123 aa19.36■□□□□ 0.69
CHCHD4-202ENST00000396914 CCL25O15444 150 aa19.35■□□□□ 0.69
CHCHD4-202ENST00000396914 G0S2P27469 103 aa19.35■□□□□ 0.69
CHCHD4-202ENST00000396914 C14orf177Q52M58 125 aa19.35■□□□□ 0.69
CHCHD4-202ENST00000396914 PKHD1P08F94 4074 aa19.35■□□□□ 0.69
CHCHD4-202ENST00000396914 TRAV13-1A0A0B4J241 112 aa19.34■□□□□ 0.69
CHCHD4-202ENST00000396914 NTN5Q8WTR8 489 aaPredicted RBP19.34■□□□□ 0.69
CHCHD4-202ENST00000396914 MRPS36P82909 103 aaKnown RBP19.32■□□□□ 0.68
CHCHD4-202ENST00000396914 PYGO1Q9Y3Y4 419 aa19.32■□□□□ 0.68
CHCHD4-202ENST00000396914 BIRC6Q9NR09 4857 aa19.31■□□□□ 0.68
CHCHD4-202ENST00000396914 C1orf196B1AJZ1 125 aa19.31■□□□□ 0.68
CHCHD4-202ENST00000396914 C18orf32Q8TCD1 76 aa19.31■□□□□ 0.68
CHCHD4-202ENST00000396914 IFITM10A6NMD0 228 aa19.29■□□□□ 0.68
CHCHD4-202ENST00000396914 SCO1O75880 301 aa19.29■□□□□ 0.68
CHCHD4-202ENST00000396914 TMEM141Q96I45 108 aa19.29■□□□□ 0.68
CHCHD4-202ENST00000396914 IGLV4-3A0A075B6K6 122 aa19.28■□□□□ 0.68
CHCHD4-202ENST00000396914 Q6ZN92 141 aa19.28■□□□□ 0.68
CHCHD4-202ENST00000396914 GCSHP23434 173 aa19.27■□□□□ 0.68
CHCHD4-202ENST00000396914 FOXI1Q12951 378 aa19.27■□□□□ 0.68
CHCHD4-202ENST00000396914 FAM104AQ969W3 186 aa19.27■□□□□ 0.68
CHCHD4-202ENST00000396914 CFAP161Q6P656 301 aa19.26■□□□□ 0.67
CHCHD4-202ENST00000396914 TOMM6Q96B49 74 aa19.26■□□□□ 0.67
CHCHD4-202ENST00000396914 hDV102S1A0JD36 115 aa19.25■□□□□ 0.67
CHCHD4-202ENST00000396914 LINC01546A6NGU7 62 aa19.25■□□□□ 0.67
CHCHD4-202ENST00000396914 CD164L2Q6UWJ8 174 aa19.25■□□□□ 0.67
CHCHD4-202ENST00000396914 TEX43Q6ZNM6 134 aa19.25■□□□□ 0.67
CHCHD4-202ENST00000396914 AP5S1Q9NUS5 200 aa19.25■□□□□ 0.67
CHCHD4-202ENST00000396914 TRGC2P03986 189 aa19.25■□□□□ 0.67
CHCHD4-202ENST00000396914 PRSS1P07477 247 aa19.25■□□□□ 0.67
CHCHD4-202ENST00000396914 LINC00614P0C842 121 aa19.25■□□□□ 0.67
CHCHD4-202ENST00000396914 SCGB3A1Q96QR1 104 aa19.25■□□□□ 0.67
CHCHD4-202ENST00000396914 COLCA2A8K830 154 aa19.24■□□□□ 0.67
CHCHD4-202ENST00000396914 RAB5BP61020 215 aa19.24■□□□□ 0.67
CHCHD4-202ENST00000396914 VCX2Q9H322 139 aa19.24■□□□□ 0.67
CHCHD4-202ENST00000396914 DYNC1H1Q14204 4646 aaKnown RBP19.23■□□□□ 0.67
CHCHD4-202ENST00000396914 C2orf88Q9BSF0 95 aa19.23■□□□□ 0.67
CHCHD4-202ENST00000396914 IGIPA6NJ69 53 aa19.22■□□□□ 0.67
CHCHD4-202ENST00000396914 MALP21145 153 aa19.2■□□□□ 0.66
CHCHD4-202ENST00000396914 HIGD2BQ4VC39 106 aa19.2■□□□□ 0.66
CHCHD4-202ENST00000396914 PAPPA-AS1Q5QFB9 102 aa19.2■□□□□ 0.66
CHCHD4-202ENST00000396914 LINC01549A6NIU2 74 aa19.19■□□□□ 0.66
CHCHD4-202ENST00000396914 COX7A2LO14548 114 aa19.19■□□□□ 0.66
CHCHD4-202ENST00000396914 KRTAP10-1P60331 282 aa19.19■□□□□ 0.66
CHCHD4-202ENST00000396914 ZC2HC1BQ5TFG8 222 aa19.19■□□□□ 0.66
CHCHD4-202ENST00000396914 ERASQ7Z444 233 aa19.19■□□□□ 0.66
CHCHD4-202ENST00000396914 C15orf56Q8N910 161 aa19.19■□□□□ 0.66
CHCHD4-202ENST00000396914 URB1-AS1Q96HZ7 61 aa19.19■□□□□ 0.66
CHCHD4-202ENST00000396914 TIMM17AQ99595 171 aa19.19■□□□□ 0.66
CHCHD4-202ENST00000396914 NPSP0C0P6 89 aa19.18■□□□□ 0.66
CHCHD4-202ENST00000396914 LINC01620Q4KN68 170 aa19.17■□□□□ 0.66
CHCHD4-202ENST00000396914 C5orf38Q86SI9 138 aa19.17■□□□□ 0.66
CHCHD4-202ENST00000396914 PMCHL1Q16048 86 aa19.17■□□□□ 0.66
CHCHD4-202ENST00000396914 IGHV1-58A0A0C4DH39 117 aa19.16■□□□□ 0.66
CHCHD4-202ENST00000396914 BAGE3Q86Y29 109 aa19.16■□□□□ 0.66
CHCHD4-202ENST00000396914 DNAH5Q8TE73 4624 aa19.15■□□□□ 0.66
CHCHD4-202ENST00000396914 AMELXQ99217 191 aa19.15■□□□□ 0.66
CHCHD4-202ENST00000396914 LINC00173Q6ZV60 143 aa19.14■□□□□ 0.65
CHCHD4-202ENST00000396914 HBDP02042 147 aa19.13■□□□□ 0.65
CHCHD4-202ENST00000396914 UBE2D1P51668 147 aa19.12■□□□□ 0.65
CHCHD4-202ENST00000396914 S100A1P23297 94 aa19.11■□□□□ 0.65
CHCHD4-202ENST00000396914 LINC00242Q5T6M2 205 aa19.11■□□□□ 0.65
CHCHD4-202ENST00000396914 GVQW2A0A096LPI5 108 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms