RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 PSMG3-AS1Q96PY0 264 aa12.61□□□□□ -0.39
TRAF3IP1-202ENST00000391993 MTORP42345 2549 aa12.61□□□□□ -0.39
TRAF3IP1-202ENST00000391993 TRBV27A0A0K0K1C4 114 aa12.61□□□□□ -0.39
TRAF3IP1-202ENST00000391993 PRB2P02812 416 aaPredicted RBP12.61□□□□□ -0.39
TRAF3IP1-202ENST00000391993 MIR7-3HGQ8N6C7 128 aa12.61□□□□□ -0.39
TRAF3IP1-202ENST00000391993 IGHV4-4A0A075B6R2 117 aa12.6□□□□□ -0.39
TRAF3IP1-202ENST00000391993 CLPSL2Q6UWE3 100 aa12.6□□□□□ -0.39
TRAF3IP1-202ENST00000391993 A0A1W2PRX2 142 aa12.6□□□□□ -0.39
TRAF3IP1-202ENST00000391993 LINC00467Q9BRT7 94 aa12.6□□□□□ -0.39
TRAF3IP1-202ENST00000391993 PCSK5Q92824 1860 aa12.6□□□□□ -0.39
TRAF3IP1-202ENST00000391993 SBSPONQ8IVN8 264 aa12.59□□□□□ -0.39
TRAF3IP1-202ENST00000391993 BRI3O95415 125 aa12.59□□□□□ -0.39
TRAF3IP1-202ENST00000391993 USP17L23D6RBM5 183 aa12.59□□□□□ -0.39
TRAF3IP1-202ENST00000391993 ZNF415Q09FC8 603 aa12.59□□□□□ -0.39
TRAF3IP1-202ENST00000391993 UBL5Q9BZL1 73 aa12.59□□□□□ -0.39
TRAF3IP1-202ENST00000391993 COX8CQ7Z4L0 72 aa12.58□□□□□ -0.4
TRAF3IP1-202ENST00000391993 LINC00526Q96FQ7 95 aa12.58□□□□□ -0.4
TRAF3IP1-202ENST00000391993 C4orf26Q17RF5 130 aa12.58□□□□□ -0.4
TRAF3IP1-202ENST00000391993 BRK1Q8WUW1 75 aa12.58□□□□□ -0.4
TRAF3IP1-202ENST00000391993 TRAV13-2A0A0B4J235 113 aa12.57□□□□□ -0.4
TRAF3IP1-202ENST00000391993 USMG5Q96IX5 58 aa12.57□□□□□ -0.4
TRAF3IP1-202ENST00000391993 TMEM86BQ8N661 226 aa12.57□□□□□ -0.4
TRAF3IP1-202ENST00000391993 DEFB136Q30KP8 78 aa12.57□□□□□ -0.4
TRAF3IP1-202ENST00000391993 IGFL2Q6UWQ7 119 aa12.57□□□□□ -0.4
TRAF3IP1-202ENST00000391993 IGHV4OR15-8A0A075B7B6 117 aa12.56□□□□□ -0.4
TRAF3IP1-202ENST00000391993 A0A087WW49 117 aa12.56□□□□□ -0.4
TRAF3IP1-202ENST00000391993 DMXL1Q9Y485 3027 aa12.55□□□□□ -0.4
TRAF3IP1-202ENST00000391993 TRGV4A0A0C4DH28 118 aa12.55□□□□□ -0.4
TRAF3IP1-202ENST00000391993 LINC01546A6NGU7 62 aa12.55□□□□□ -0.4
TRAF3IP1-202ENST00000391993 RPL18AQ02543 176 aaKnown RBP12.55□□□□□ -0.4
TRAF3IP1-202ENST00000391993 APRG1Q8IVJ8 170 aa12.55□□□□□ -0.4
TRAF3IP1-202ENST00000391993 ENHOQ6UWT2 76 aa12.55□□□□□ -0.4
TRAF3IP1-202ENST00000391993 MAPK1IP1LQ8NDC0 245 aa12.55□□□□□ -0.4
TRAF3IP1-202ENST00000391993 MUC4Q99102 2169 aa12.54□□□□□ -0.4
TRAF3IP1-202ENST00000391993 C5orf56Q8N8D9 126 aa12.54□□□□□ -0.4
TRAF3IP1-202ENST00000391993 U3KQE9 123 aa12.54□□□□□ -0.4
TRAF3IP1-202ENST00000391993 EIF4EBP3O60516 100 aaPredicted RBP12.54□□□□□ -0.4
TRAF3IP1-202ENST00000391993 LRRC75A-AS1Q8N1F1 130 aa12.54□□□□□ -0.4
TRAF3IP1-202ENST00000391993 IMUPQ9GZP8 106 aa12.54□□□□□ -0.4
TRAF3IP1-202ENST00000391993 HIST2H2BDQ6DRA6 164 aa12.53□□□□□ -0.4
TRAF3IP1-202ENST00000391993 Q8N2B8 174 aa12.53□□□□□ -0.4
TRAF3IP1-202ENST00000391993 SNURFQ9Y675 71 aa12.53□□□□□ -0.4
TRAF3IP1-202ENST00000391993 DAD1P61803 113 aa12.53□□□□□ -0.4
TRAF3IP1-202ENST00000391993 FAM240AA0A1B0GVK7 77 aa12.53□□□□□ -0.4
TRAF3IP1-202ENST00000391993 SERP2Q8N6R1 65 aa12.53□□□□□ -0.4
TRAF3IP1-202ENST00000391993 MED14OSP0DP75 135 aa12.52□□□□□ -0.4
TRAF3IP1-202ENST00000391993 TNFRSF13BO14836 293 aaPredicted RBP12.52□□□□□ -0.41
TRAF3IP1-202ENST00000391993 Q9UF83 564 aa12.52□□□□□ -0.41
TRAF3IP1-202ENST00000391993 MPLKIPQ8TAP9 179 aa12.52□□□□□ -0.41
TRAF3IP1-202ENST00000391993 A0A096LPF7 62 aa12.51□□□□□ -0.41
TRAF3IP1-202ENST00000391993 HIST2H2BCQ6DN03 193 aa12.51□□□□□ -0.41
TRAF3IP1-202ENST00000391993 STHQ8IWL8 128 aa12.51□□□□□ -0.41
TRAF3IP1-202ENST00000391993 F8P00451 2351 aa12.51□□□□□ -0.41
TRAF3IP1-202ENST00000391993 ORMDL1Q9P0S3 153 aa12.51□□□□□ -0.41
TRAF3IP1-202ENST00000391993 ODF3BA8MYP8 253 aa12.5□□□□□ -0.41
TRAF3IP1-202ENST00000391993 PSMB8P28062 276 aa12.5□□□□□ -0.41
TRAF3IP1-202ENST00000391993 SCXQ7RTU7 201 aa12.5□□□□□ -0.41
TRAF3IP1-202ENST00000391993 IGHV4-38-2P0DP08 117 aa12.5□□□□□ -0.41
TRAF3IP1-202ENST00000391993 HILS1P60008 231 aa12.5□□□□□ -0.41
TRAF3IP1-202ENST00000391993 C10orf99Q6UWK7 81 aa12.5□□□□□ -0.41
TRAF3IP1-202ENST00000391993 TRBV7-7A0A0K0K1E9 115 aa12.49□□□□□ -0.41
TRAF3IP1-202ENST00000391993 XCL1P47992 114 aa12.49□□□□□ -0.41
TRAF3IP1-202ENST00000391993 LRBAP50851 2863 aa12.49□□□□□ -0.41
TRAF3IP1-202ENST00000391993 SMCR5Q8TEV8 140 aa12.49□□□□□ -0.41
TRAF3IP1-202ENST00000391993 OVOL2Q9BRP0 275 aa12.48□□□□□ -0.41
TRAF3IP1-202ENST00000391993 IGFL3Q6UXB1 125 aa12.48□□□□□ -0.41
TRAF3IP1-202ENST00000391993 SPANXDQ9BXN6 97 aa12.48□□□□□ -0.41
TRAF3IP1-202ENST00000391993 SPANXCQ9NY87 97 aa12.48□□□□□ -0.41
TRAF3IP1-202ENST00000391993 A0A0J9YX75 114 aa12.47□□□□□ -0.41
TRAF3IP1-202ENST00000391993 ZNF575Q86XF7 245 aa12.47□□□□□ -0.41
TRAF3IP1-202ENST00000391993 IGHG2P01859 326 aa12.47□□□□□ -0.41
TRAF3IP1-202ENST00000391993 RPL35AP18077 110 aaKnown RBP12.47□□□□□ -0.41
TRAF3IP1-202ENST00000391993 CXCL5P42830 114 aa12.47□□□□□ -0.41
TRAF3IP1-202ENST00000391993 TMEM258P61165 79 aa12.47□□□□□ -0.41
TRAF3IP1-202ENST00000391993 COX7B2Q8TF08 81 aa12.47□□□□□ -0.41
TRAF3IP1-202ENST00000391993 LRRK2Q5S007 2527 aa12.47□□□□□ -0.41
TRAF3IP1-202ENST00000391993 DEFB130BP0DP73 79 aa12.46□□□□□ -0.41
TRAF3IP1-202ENST00000391993 DEFB130AP0DP74 79 aa12.46□□□□□ -0.41
TRAF3IP1-202ENST00000391993 CITED2Q99967 270 aaPredicted RBP12.46□□□□□ -0.41
TRAF3IP1-202ENST00000391993 ZZEF1O43149 2961 aa12.46□□□□□ -0.41
TRAF3IP1-202ENST00000391993 NBL1P41271 181 aa12.46□□□□□ -0.41
TRAF3IP1-202ENST00000391993 PLA2G2CQ5R387 149 aa12.46□□□□□ -0.41
TRAF3IP1-202ENST00000391993 COX6A2Q02221 97 aa12.46□□□□□ -0.42
TRAF3IP1-202ENST00000391993 TRBV6-5A0A0K0K1A5 114 aa12.46□□□□□ -0.42
TRAF3IP1-202ENST00000391993 AMELXQ99217 191 aa12.46□□□□□ -0.42
TRAF3IP1-202ENST00000391993 LINC00846Q9NV44 126 aa12.46□□□□□ -0.42
TRAF3IP1-202ENST00000391993 LINC00315P59091 139 aa12.45□□□□□ -0.42
TRAF3IP1-202ENST00000391993 MRPS36P82909 103 aaKnown RBP12.45□□□□□ -0.42
TRAF3IP1-202ENST00000391993 FAM236DA0A1B0GTK5 79 aa12.45□□□□□ -0.42
TRAF3IP1-202ENST00000391993 FAM236CP0DP71 79 aa12.45□□□□□ -0.42
TRAF3IP1-202ENST00000391993 KIF25-AS1Q9Y6Z4 181 aa12.45□□□□□ -0.42
TRAF3IP1-202ENST00000391993 UPK3BQ9BT76 320 aa12.44□□□□□ -0.42
TRAF3IP1-202ENST00000391993 NDUFA1O15239 70 aa12.43□□□□□ -0.42
TRAF3IP1-202ENST00000391993 INSP01308 110 aa12.43□□□□□ -0.42
TRAF3IP1-202ENST00000391993 MUC3AQ02505 3323 aa12.43□□□□□ -0.42
TRAF3IP1-202ENST00000391993 A0A087WYN8 130 aa12.43□□□□□ -0.42
TRAF3IP1-202ENST00000391993 FAM19A1Q7Z5A9 133 aa12.43□□□□□ -0.42
TRAF3IP1-202ENST00000391993 SIRPDQ9H106 197 aa12.43□□□□□ -0.42
TRAF3IP1-202ENST00000391993 Q8N6K4 173 aa12.42□□□□□ -0.42
TRAF3IP1-202ENST00000391993 SMIM11BQ8TCY0 68 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms