RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 FAM167A-AS1Q96KT0 104 aa0.69□□□□□ -2.3
SNAPC3-201ENST00000380799 MANBALQ9NQG1 85 aa0.69□□□□□ -2.3
SNAPC3-201ENST00000380799 CDC42SE2Q9NRR3 84 aa0.69□□□□□ -2.3
SNAPC3-201ENST00000380799 TRAV22A0A0B4J277 110 aa0.68□□□□□ -2.3
SNAPC3-201ENST00000380799 SFT2D2O95562 160 aa0.68□□□□□ -2.3
SNAPC3-201ENST00000380799 HAMPP81172 84 aa0.68□□□□□ -2.3
SNAPC3-201ENST00000380799 ARHGEF5Q12774 1597 aa0.68□□□□□ -2.3
SNAPC3-201ENST00000380799 KDM5AP29375 1690 aaKnown RBP0.68□□□□□ -2.3
SNAPC3-201ENST00000380799 LRRC37A2A6NM11 1700 aa0.67□□□□□ -2.3
SNAPC3-201ENST00000380799 SPINK6Q6UWN8 80 aa0.67□□□□□ -2.3
SNAPC3-201ENST00000380799 LINC00472Q9H8W2 130 aa0.67□□□□□ -2.3
SNAPC3-201ENST00000380799 TRAV30A0A087WSZ9 112 aa0.66□□□□□ -2.3
SNAPC3-201ENST00000380799 UBE2D3P61077 147 aa0.66□□□□□ -2.3
SNAPC3-201ENST00000380799 UBE2D2P62837 147 aa0.66□□□□□ -2.3
SNAPC3-201ENST00000380799 DOCK11Q5JSL3 2073 aa0.66□□□□□ -2.3
SNAPC3-201ENST00000380799 CRYM-AS1A6NIL9 109 aa0.65□□□□□ -2.31
SNAPC3-201ENST00000380799 S100A10P60903 97 aa0.65□□□□□ -2.31
SNAPC3-201ENST00000380799 SFTA2Q6UW10 78 aa0.65□□□□□ -2.31
SNAPC3-201ENST00000380799 NXT2Q9NPJ8 142 aaKnown RBP0.65□□□□□ -2.31
SNAPC3-201ENST00000380799 SHANK2Q9UPX8 1470 aa0.65□□□□□ -2.31
SNAPC3-201ENST00000380799 TOPAZ1Q8N9V7 1692 aa0.65□□□□□ -2.31
SNAPC3-201ENST00000380799 CNTLNQ9NXG0 1405 aa0.64□□□□□ -2.31
SNAPC3-201ENST00000380799 LRP6O75581 1613 aa0.64□□□□□ -2.31
SNAPC3-201ENST00000380799 TCHHQ07283 1943 aa0.64□□□□□ -2.31
SNAPC3-201ENST00000380799 hADV29S1A0JD25 119 aa0.64□□□□□ -2.31
SNAPC3-201ENST00000380799 KRTDAPP60985 99 aa0.64□□□□□ -2.31
SNAPC3-201ENST00000380799 PRO1854Q9UHT4 67 aa0.64□□□□□ -2.31
SNAPC3-201ENST00000380799 ARL2-SNX15V9GYD0 113 aa0.64□□□□□ -2.31
SNAPC3-201ENST00000380799 FRAS1Q86XX4 4008 aa0.64□□□□□ -2.31
SNAPC3-201ENST00000380799 TOP2BQ02880 1626 aa0.64□□□□□ -2.31
SNAPC3-201ENST00000380799 HMGXB3Q12766 1538 aa0.64□□□□□ -2.31
SNAPC3-201ENST00000380799 ABCC5O15440 1437 aa0.64□□□□□ -2.31
SNAPC3-201ENST00000380799 KDM3BQ7LBC6 1761 aa0.63□□□□□ -2.31
SNAPC3-201ENST00000380799 COX6CP09669 75 aa0.63□□□□□ -2.31
SNAPC3-201ENST00000380799 IGLC1P0CG04 106 aa0.63□□□□□ -2.31
SNAPC3-201ENST00000380799 Q6JHZ5 121 aa0.63□□□□□ -2.31
SNAPC3-201ENST00000380799 FAM223AQ8IWN6 122 aa0.63□□□□□ -2.31
SNAPC3-201ENST00000380799 ABCA3Q99758 1704 aa0.63□□□□□ -2.31
SNAPC3-201ENST00000380799 EHBP1L1Q8N3D4 1523 aa0.63□□□□□ -2.31
SNAPC3-201ENST00000380799 PI4KAP42356 2102 aa0.62□□□□□ -2.31
SNAPC3-201ENST00000380799 SBF2Q86WG5 1849 aa0.62□□□□□ -2.31
SNAPC3-201ENST00000380799 CHD1O14646 1710 aa0.62□□□□□ -2.31
SNAPC3-201ENST00000380799 A0A0D9SFI3 127 aa0.62□□□□□ -2.31
SNAPC3-201ENST00000380799 MGPP08493 103 aa0.62□□□□□ -2.31
SNAPC3-201ENST00000380799 TRAPPC2P0DI81 140 aa0.62□□□□□ -2.31
SNAPC3-201ENST00000380799 TRAPPC2BP0DI82 140 aa0.62□□□□□ -2.31
SNAPC3-201ENST00000380799 FAIMQ9NVQ4 179 aa0.62□□□□□ -2.31
SNAPC3-201ENST00000380799 JMJD1CQ15652 2540 aa0.62□□□□□ -2.31
SNAPC3-201ENST00000380799 WNK3Q9BYP7 1800 aa0.61□□□□□ -2.31
SNAPC3-201ENST00000380799 SEC11AP67812 179 aa0.61□□□□□ -2.31
SNAPC3-201ENST00000380799 ACBD7Q8N6N7 88 aa0.61□□□□□ -2.31
SNAPC3-201ENST00000380799 CNFNQ9BYD5 112 aa0.61□□□□□ -2.31
SNAPC3-201ENST00000380799 ERCC6L2Q5T890 1561 aa0.61□□□□□ -2.31
SNAPC3-201ENST00000380799 DIP2CQ9Y2E4 1556 aa0.61□□□□□ -2.31
SNAPC3-201ENST00000380799 RAPGEF6Q8TEU7 1601 aa0.6□□□□□ -2.31
SNAPC3-201ENST00000380799 PLXNB2O15031 1838 aa0.6□□□□□ -2.31
SNAPC3-201ENST00000380799 M0R3E3 92 aa0.6□□□□□ -2.31
SNAPC3-201ENST00000380799 GNGT2O14610 69 aa0.6□□□□□ -2.31
SNAPC3-201ENST00000380799 BCE1O60756 84 aa0.6□□□□□ -2.31
SNAPC3-201ENST00000380799 PRO0255Q9UI72 69 aa0.6□□□□□ -2.31
SNAPC3-201ENST00000380799 LAMC1P11047 1609 aa0.6□□□□□ -2.31
SNAPC3-201ENST00000380799 SCN7AQ01118 1682 aa0.59□□□□□ -2.31
SNAPC3-201ENST00000380799 S100A3P33764 101 aa0.59□□□□□ -2.31
SNAPC3-201ENST00000380799 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
SNAPC3-201ENST00000380799 NCMAPQ5T1S8 102 aa0.59□□□□□ -2.31
SNAPC3-201ENST00000380799 SPRR4Q96PI1 79 aa0.59□□□□□ -2.31
SNAPC3-201ENST00000380799 FAM223BA6NKX1 122 aa0.58□□□□□ -2.32
SNAPC3-201ENST00000380799 C10orf142B7Z368 130 aa0.58□□□□□ -2.32
SNAPC3-201ENST00000380799 MPC2O95563 127 aa0.58□□□□□ -2.32
SNAPC3-201ENST00000380799 MT-ATP8P03928 68 aa0.58□□□□□ -2.32
SNAPC3-201ENST00000380799 BTAF1O14981 1849 aa0.58□□□□□ -2.32
SNAPC3-201ENST00000380799 MRC2Q9UBG0 1479 aa0.58□□□□□ -2.32
SNAPC3-201ENST00000380799 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
SNAPC3-201ENST00000380799 SPCS1Q9Y6A9 102 aa0.57□□□□□ -2.32
SNAPC3-201ENST00000380799 NSD3Q9BZ95 1437 aa0.56□□□□□ -2.32
SNAPC3-201ENST00000380799 TNCP24821 2201 aa0.56□□□□□ -2.32
SNAPC3-201ENST00000380799 M0R143 59 aa0.56□□□□□ -2.32
SNAPC3-201ENST00000380799 UBA52P62987 128 aaKnown RBP0.56□□□□□ -2.32
SNAPC3-201ENST00000380799 TMEM263Q8WUH6 116 aaKnown RBP0.56□□□□□ -2.32
SNAPC3-201ENST00000380799 AP4S1Q9Y587 144 aa0.56□□□□□ -2.32
SNAPC3-201ENST00000380799 VPS8Q8N3P4 1428 aa0.55□□□□□ -2.32
SNAPC3-201ENST00000380799 ADGRL2O95490 1459 aa0.55□□□□□ -2.32
SNAPC3-201ENST00000380799 Q5BKY6 102 aa0.55□□□□□ -2.32
SNAPC3-201ENST00000380799 PMCHL2Q9BQD1 86 aa0.55□□□□□ -2.32
SNAPC3-201ENST00000380799 APCP25054 2843 aa0.55□□□□□ -2.32
SNAPC3-201ENST00000380799 NAV3Q8IVL0 2385 aa0.54□□□□□ -2.32
SNAPC3-201ENST00000380799 COL4A6Q14031 1691 aa0.54□□□□□ -2.32
SNAPC3-201ENST00000380799 A0A1B0GWA3 101 aa0.54□□□□□ -2.32
SNAPC3-201ENST00000380799 S100A8P05109 93 aa0.54□□□□□ -2.32
SNAPC3-201ENST00000380799 SAA2P0DJI9 122 aaPredicted RBP0.54□□□□□ -2.32
SNAPC3-201ENST00000380799 C10orf113Q5VZT2 155 aa0.54□□□□□ -2.32
SNAPC3-201ENST00000380799 GAPVD1Q14C86 1478 aa0.54□□□□□ -2.32
SNAPC3-201ENST00000380799 FYCO1Q9BQS8 1478 aa0.54□□□□□ -2.32
SNAPC3-201ENST00000380799 PRDM15P57071 1507 aaPredicted RBP0.54□□□□□ -2.32
SNAPC3-201ENST00000380799 ARHGEF12Q9NZN5 1544 aa0.54□□□□□ -2.32
SNAPC3-201ENST00000380799 BIVM-ERCC5R4GMW8 1640 aa0.53□□□□□ -2.32
SNAPC3-201ENST00000380799 CADP27708 2225 aa0.53□□□□□ -2.32
SNAPC3-201ENST00000380799 A0A0G2JND7 137 aa0.53□□□□□ -2.32
SNAPC3-201ENST00000380799 NDUFC1O43677 76 aa0.53□□□□□ -2.32
SNAPC3-201ENST00000380799 DPY30Q9C005 99 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms