RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 LRRK2Q5S007 2527 aa11.74□□□□□ -0.53
VPS16-203ENST00000380469 ZNF462Q96JM2 2506 aa11.74□□□□□ -0.53
VPS16-203ENST00000380469 NAV2Q8IVL1 2488 aa11.74□□□□□ -0.53
VPS16-203ENST00000380469 NDUFA1O15239 70 aa11.74□□□□□ -0.53
VPS16-203ENST00000380469 CIDEAO60543 219 aa11.74□□□□□ -0.53
VPS16-203ENST00000380469 MT-ATP8P03928 68 aa11.74□□□□□ -0.53
VPS16-203ENST00000380469 HERVK_113P63121 156 aa11.74□□□□□ -0.53
VPS16-203ENST00000380469 MYO9AB2RTY4 2548 aa11.74□□□□□ -0.53
VPS16-203ENST00000380469 XGP55808 180 aa11.74□□□□□ -0.53
VPS16-203ENST00000380469 RPL36AP83881 106 aaKnown RBP11.74□□□□□ -0.53
VPS16-203ENST00000380469 RPL36ALQ969Q0 106 aaKnown RBP11.74□□□□□ -0.53
VPS16-203ENST00000380469 PTPN13Q12923 2485 aa11.73□□□□□ -0.53
VPS16-203ENST00000380469 TRBV10-2A0A0K0K1G8 114 aa11.73□□□□□ -0.53
VPS16-203ENST00000380469 A0A1W2PRX2 142 aa11.73□□□□□ -0.53
VPS16-203ENST00000380469 TEX29Q8N6K0 151 aa11.73□□□□□ -0.53
VPS16-203ENST00000380469 BBC3Q96PG8 261 aaPredicted RBP11.73□□□□□ -0.53
VPS16-203ENST00000380469 CKS1BP61024 79 aa11.72□□□□□ -0.53
VPS16-203ENST00000380469 IL17DQ8TAD2 202 aa11.72□□□□□ -0.53
VPS16-203ENST00000380469 TRBV10-1A0A0K0K1A3 114 aa11.72□□□□□ -0.53
VPS16-203ENST00000380469 K7EQD1 137 aa11.72□□□□□ -0.53
VPS16-203ENST00000380469 CCL24O00175 119 aa11.72□□□□□ -0.53
VPS16-203ENST00000380469 COX6A2Q02221 97 aa11.72□□□□□ -0.53
VPS16-203ENST00000380469 C11orf44Q8N8P7 122 aa11.72□□□□□ -0.53
VPS16-203ENST00000380469 DAZ2Q13117 558 aaKnown RBP11.71□□□□□ -0.53
VPS16-203ENST00000380469 DAZ4Q86SG3 579 aaKnown RBP11.71□□□□□ -0.53
VPS16-203ENST00000380469 ZNF843Q8N446 348 aa11.71□□□□□ -0.53
VPS16-203ENST00000380469 NTN5Q8WTR8 489 aaPredicted RBP11.71□□□□□ -0.53
VPS16-203ENST00000380469 LINC01600Q96MT4 127 aa11.71□□□□□ -0.53
VPS16-203ENST00000380469 DAZ3Q9NR90 486 aaKnown RBP11.71□□□□□ -0.53
VPS16-203ENST00000380469 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.71□□□□□ -0.54
VPS16-203ENST00000380469 UBR5O95071 2799 aaPredicted RBP11.7□□□□□ -0.54
VPS16-203ENST00000380469 DNAJC9-AS1A6NH13 148 aa11.7□□□□□ -0.54
VPS16-203ENST00000380469 LINC00242Q5T6M2 205 aa11.7□□□□□ -0.54
VPS16-203ENST00000380469 ABCA12Q86UK0 2595 aa11.7□□□□□ -0.54
VPS16-203ENST00000380469 TRAV4A0A0B4J268 109 aa11.7□□□□□ -0.54
VPS16-203ENST00000380469 IGLV5-39A0A0G2JS06 123 aa11.7□□□□□ -0.54
VPS16-203ENST00000380469 Q6ZTI0 123 aa11.7□□□□□ -0.54
VPS16-203ENST00000380469 DAND5Q8N907 189 aa11.7□□□□□ -0.54
VPS16-203ENST00000380469 CSDC2Q9Y534 153 aaKnown RBP11.7□□□□□ -0.54
VPS16-203ENST00000380469 LINC00694P0DN24 101 aa11.69□□□□□ -0.54
VPS16-203ENST00000380469 RPL13AP40429 203 aaKnown RBP11.69□□□□□ -0.54
VPS16-203ENST00000380469 Q9H8V8 135 aa11.69□□□□□ -0.54
VPS16-203ENST00000380469 FAM19A3Q7Z5A8 133 aa11.69□□□□□ -0.54
VPS16-203ENST00000380469 KRTAP1-3Q8IUG1 177 aa11.69□□□□□ -0.54
VPS16-203ENST00000380469 C2orf82Q6UX34 121 aa11.68□□□□□ -0.54
VPS16-203ENST00000380469 ZFYVE26Q68DK2 2539 aa11.68□□□□□ -0.54
VPS16-203ENST00000380469 CHD6Q8TD26 2715 aa11.68□□□□□ -0.54
VPS16-203ENST00000380469 TRAV13-1A0A0B4J241 112 aa11.68□□□□□ -0.54
VPS16-203ENST00000380469 COPS9Q8WXC6 57 aa11.68□□□□□ -0.54
VPS16-203ENST00000380469 GAGE12JA6NER3 117 aa11.67□□□□□ -0.54
VPS16-203ENST00000380469 CMC4P56277 68 aaPredicted RBP11.67□□□□□ -0.54
VPS16-203ENST00000380469 GAGE4Q13068 117 aa11.67□□□□□ -0.54
VPS16-203ENST00000380469 GAGE5Q13069 117 aa11.67□□□□□ -0.54
VPS16-203ENST00000380469 NTM-AS1Q6ZSK4 140 aa11.67□□□□□ -0.54
VPS16-203ENST00000380469 H7C423 109 aa11.66□□□□□ -0.54
VPS16-203ENST00000380469 NOP10Q9NPE3 64 aaKnown RBP11.66□□□□□ -0.54
VPS16-203ENST00000380469 AKAP9Q99996 3911 aa11.66□□□□□ -0.54
VPS16-203ENST00000380469 TEX49A0A1B0GTD5 131 aa11.66□□□□□ -0.54
VPS16-203ENST00000380469 NDUFA7O95182 113 aa11.66□□□□□ -0.54
VPS16-203ENST00000380469 LINC00308Q8TCZ7 52 aa11.66□□□□□ -0.54
VPS16-203ENST00000380469 CLEC2BQ92478 149 aa11.66□□□□□ -0.54
VPS16-203ENST00000380469 UBE2WQ96B02 151 aa11.66□□□□□ -0.54
VPS16-203ENST00000380469 H3BT86 120 aa11.65□□□□□ -0.54
VPS16-203ENST00000380469 ZNF625Q96I27 306 aaPredicted RBP11.65□□□□□ -0.54
VPS16-203ENST00000380469 CDC42SE2Q9NRR3 84 aa11.65□□□□□ -0.54
VPS16-203ENST00000380469 USP24Q9UPU5 2620 aa11.65□□□□□ -0.54
VPS16-203ENST00000380469 SMIM1B2RUZ4 78 aa11.65□□□□□ -0.54
VPS16-203ENST00000380469 LST1O00453 97 aa11.65□□□□□ -0.54
VPS16-203ENST00000380469 UBE2L6O14933 153 aa11.65□□□□□ -0.54
VPS16-203ENST00000380469 CITED2Q99967 270 aaPredicted RBP11.64□□□□□ -0.55
VPS16-203ENST00000380469 TRAV8-4A0A0B4J246 113 aa11.64□□□□□ -0.55
VPS16-203ENST00000380469 A0A0U1RRA0 63 aa11.63□□□□□ -0.55
VPS16-203ENST00000380469 PRIMA1Q86XR5 153 aa11.63□□□□□ -0.55
VPS16-203ENST00000380469 TMEM243Q9BU79 118 aa11.63□□□□□ -0.55
VPS16-203ENST00000380469 WNK1Q9H4A3 2382 aa11.63□□□□□ -0.55
VPS16-203ENST00000380469 MEIG1Q5JSS6 88 aa11.63□□□□□ -0.55
VPS16-203ENST00000380469 WFDC11Q8NEX6 87 aa11.63□□□□□ -0.55
VPS16-203ENST00000380469 C16orf74Q96GX8 76 aa11.63□□□□□ -0.55
VPS16-203ENST00000380469 ESM1Q9NQ30 184 aa11.63□□□□□ -0.55
VPS16-203ENST00000380469 TRGV2A0A075B6R0 118 aa11.62□□□□□ -0.55
VPS16-203ENST00000380469 EPG5Q9HCE0 2579 aa11.62□□□□□ -0.55
VPS16-203ENST00000380469 TLN2Q9Y4G6 2542 aa11.61□□□□□ -0.55
VPS16-203ENST00000380469 SNCGO76070 127 aa11.61□□□□□ -0.55
VPS16-203ENST00000380469 HERV-K104P63124 156 aa11.61□□□□□ -0.55
VPS16-203ENST00000380469 F5H768 121 aa11.6□□□□□ -0.55
VPS16-203ENST00000380469 GAGE7O76087 117 aa11.6□□□□□ -0.55
VPS16-203ENST00000380469 GAGE12FP0CL80 117 aa11.6□□□□□ -0.55
VPS16-203ENST00000380469 GAGE12GP0CL81 117 aa11.6□□□□□ -0.55
VPS16-203ENST00000380469 GAGE12IP0CL82 117 aa11.6□□□□□ -0.55
VPS16-203ENST00000380469 GIG44P09565 113 aaPredicted RBP11.6□□□□□ -0.55
VPS16-203ENST00000380469 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
VPS16-203ENST00000380469 APCP25054 2843 aa11.59□□□□□ -0.55
VPS16-203ENST00000380469 CITED1Q99966 193 aa11.59□□□□□ -0.55
VPS16-203ENST00000380469 ITPR3Q14573 2671 aa11.58□□□□□ -0.56
VPS16-203ENST00000380469 TRBV6-4A0A1B0GX49 114 aa11.58□□□□□ -0.56
VPS16-203ENST00000380469 SOSTDC1Q6X4U4 206 aa11.58□□□□□ -0.56
VPS16-203ENST00000380469 LINC01006Q8NI28 216 aa11.58□□□□□ -0.56
VPS16-203ENST00000380469 ZNF469Q96JG9 3925 aaPredicted RBP11.58□□□□□ -0.56
VPS16-203ENST00000380469 TRGV4A0A0C4DH28 118 aa11.57□□□□□ -0.56
VPS16-203ENST00000380469 PLAC8L1A1L4L8 177 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms