RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 HIST2H2BDQ6DRA6 164 aa14.49□□□□□ -0.09
PCDH8-202ENST00000377942 BBC3Q96PG8 261 aaPredicted RBP14.49□□□□□ -0.09
PCDH8-202ENST00000377942 SMR3AQ99954 134 aa14.49□□□□□ -0.09
PCDH8-202ENST00000377942 COL4A2P08572 1712 aa14.49□□□□□ -0.09
PCDH8-202ENST00000377942 YPEL4Q96NS1 127 aa14.48□□□□□ -0.09
PCDH8-202ENST00000377942 WFDC10AQ9H1F0 79 aa14.48□□□□□ -0.09
PCDH8-202ENST00000377942 SRCAPQ6ZRS2 3230 aa14.48□□□□□ -0.09
PCDH8-202ENST00000377942 LECT2O14960 151 aa14.48□□□□□ -0.09
PCDH8-202ENST00000377942 USP9XQ93008 2570 aaPredicted RBP14.48□□□□□ -0.09
PCDH8-202ENST00000377942 CNFNQ9BYD5 112 aa14.47□□□□□ -0.09
PCDH8-202ENST00000377942 EXPH5Q8NEV8 1989 aa14.47□□□□□ -0.09
PCDH8-202ENST00000377942 TMEM223A0PJW6 202 aa14.47□□□□□ -0.09
PCDH8-202ENST00000377942 H3BT86 120 aa14.47□□□□□ -0.09
PCDH8-202ENST00000377942 PROK1P58294 105 aa14.47□□□□□ -0.09
PCDH8-202ENST00000377942 IGLV1-51P01701 117 aa14.46□□□□□ -0.09
PCDH8-202ENST00000377942 IBA57-AS1B1ANH7 110 aa14.46□□□□□ -0.09
PCDH8-202ENST00000377942 ODF3L2Q3SX64 289 aa14.46□□□□□ -0.09
PCDH8-202ENST00000377942 NRACQ8N912 160 aa14.46□□□□□ -0.09
PCDH8-202ENST00000377942 TEN1Q86WV5 123 aa14.46□□□□□ -0.09
PCDH8-202ENST00000377942 SPTBN4Q9H254 2564 aa14.46□□□□□ -0.1
PCDH8-202ENST00000377942 JMJD1CQ15652 2540 aa14.45□□□□□ -0.1
PCDH8-202ENST00000377942 COX7BP24311 80 aa14.45□□□□□ -0.1
PCDH8-202ENST00000377942 EML5Q05BV3 1969 aa14.45□□□□□ -0.1
PCDH8-202ENST00000377942 POLR2KP53803 58 aaKnown RBP14.45□□□□□ -0.1
PCDH8-202ENST00000377942 RBX1P62877 108 aa14.45□□□□□ -0.1
PCDH8-202ENST00000377942 ABCA12Q86UK0 2595 aa14.44□□□□□ -0.1
PCDH8-202ENST00000377942 A0A0B4J2C4 111 aa14.44□□□□□ -0.1
PCDH8-202ENST00000377942 TAX1BP3O14907 124 aa14.44□□□□□ -0.1
PCDH8-202ENST00000377942 C9orf153Q5TBE3 101 aa14.44□□□□□ -0.1
PCDH8-202ENST00000377942 ZFYVE26Q68DK2 2539 aa14.44□□□□□ -0.1
PCDH8-202ENST00000377942 TRBV10-2A0A0K0K1G8 114 aa14.44□□□□□ -0.1
PCDH8-202ENST00000377942 LELP1Q5T871 98 aa14.44□□□□□ -0.1
PCDH8-202ENST00000377942 TSHBP01222 138 aa14.43□□□□□ -0.1
PCDH8-202ENST00000377942 KPRPQ5T749 579 aaPredicted RBP14.43□□□□□ -0.1
PCDH8-202ENST00000377942 TMEM256-PLSCR3K7ERE1 68 aa14.42□□□□□ -0.1
PCDH8-202ENST00000377942 TRACP01848 142 aa14.42□□□□□ -0.1
PCDH8-202ENST00000377942 TNRC6BQ9UPQ9 1833 aaKnown RBP14.42□□□□□ -0.1
PCDH8-202ENST00000377942 IGHV4-30-4P0DP06 118 aa14.42□□□□□ -0.1
PCDH8-202ENST00000377942 Q8N976 141 aa14.42□□□□□ -0.1
PCDH8-202ENST00000377942 ADAMTS20P59510 1910 aa14.42□□□□□ -0.1
PCDH8-202ENST00000377942 NDUFB1O75438 58 aa14.41□□□□□ -0.1
PCDH8-202ENST00000377942 PDE6GP18545 87 aa14.41□□□□□ -0.1
PCDH8-202ENST00000377942 TLN2Q9Y4G6 2542 aa14.41□□□□□ -0.1
PCDH8-202ENST00000377942 RAI1Q7Z5J4 1906 aaPredicted RBP14.41□□□□□ -0.1
PCDH8-202ENST00000377942 MRPS36P82909 103 aaKnown RBP14.41□□□□□ -0.1
PCDH8-202ENST00000377942 IGKV2-24A0A0C4DH68 120 aa14.41□□□□□ -0.1
PCDH8-202ENST00000377942 SPANXB1Q9NS25 103 aaPredicted RBP14.41□□□□□ -0.1
PCDH8-202ENST00000377942 OXLD1Q5BKU9 147 aa14.4□□□□□ -0.1
PCDH8-202ENST00000377942 B9D2Q9BPU9 175 aa14.4□□□□□ -0.1
PCDH8-202ENST00000377942 CD164L2Q6UWJ8 174 aa14.4□□□□□ -0.1
PCDH8-202ENST00000377942 NREPQ16612 68 aa14.39□□□□□ -0.11
PCDH8-202ENST00000377942 DSCAML1Q8TD84 2053 aa14.39□□□□□ -0.11
PCDH8-202ENST00000377942 RBM3P98179 157 aaKnown RBP14.38□□□□□ -0.11
PCDH8-202ENST00000377942 C4orf48Q5BLP8 95 aa14.38□□□□□ -0.11
PCDH8-202ENST00000377942 CLEC2BQ92478 149 aa14.38□□□□□ -0.11
PCDH8-202ENST00000377942 USP9YO00507 2555 aaPredicted RBP14.38□□□□□ -0.11
PCDH8-202ENST00000377942 CHD8Q9HCK8 2581 aa14.38□□□□□ -0.11
PCDH8-202ENST00000377942 SYCNQ0VAF6 134 aa14.38□□□□□ -0.11
PCDH8-202ENST00000377942 UBE2D3P61077 147 aa14.36□□□□□ -0.11
PCDH8-202ENST00000377942 UBE2D2P62837 147 aa14.36□□□□□ -0.11
PCDH8-202ENST00000377942 COX8CQ7Z4L0 72 aa14.36□□□□□ -0.11
PCDH8-202ENST00000377942 UBE2D4Q9Y2X8 147 aa14.35□□□□□ -0.11
PCDH8-202ENST00000377942 LINC00308Q8TCZ7 52 aa14.35□□□□□ -0.11
PCDH8-202ENST00000377942 TIMM17BO60830 172 aa14.34□□□□□ -0.11
PCDH8-202ENST00000377942 EDN2P20800 178 aa14.34□□□□□ -0.11
PCDH8-202ENST00000377942 WFDC2Q14508 124 aa14.34□□□□□ -0.11
PCDH8-202ENST00000377942 NDUFS5O43920 106 aa14.34□□□□□ -0.11
PCDH8-202ENST00000377942 LOC100131303A0A0U1RQF7 123 aa14.33□□□□□ -0.12
PCDH8-202ENST00000377942 LINC00959A0A1B0GUT2 108 aa14.32□□□□□ -0.12
PCDH8-202ENST00000377942 PRM2P04554 102 aa14.32□□□□□ -0.12
PCDH8-202ENST00000377942 RNASE8Q8TDE3 154 aaKnown RBP14.31□□□□□ -0.12
PCDH8-202ENST00000377942 ZNF462Q96JM2 2506 aa14.3□□□□□ -0.12
PCDH8-202ENST00000377942 CLUHP3Q96NS8 147 aa14.3□□□□□ -0.12
PCDH8-202ENST00000377942 CHCHD7Q9BUK0 85 aa14.3□□□□□ -0.12
PCDH8-202ENST00000377942 IGKV2D-26A0A0A0MRZ7 120 aa14.29□□□□□ -0.12
PCDH8-202ENST00000377942 A0A0J9YWU9 116 aa14.29□□□□□ -0.12
PCDH8-202ENST00000377942 HIGD2AQ9BW72 106 aa14.29□□□□□ -0.12
PCDH8-202ENST00000377942 FOXI1Q12951 378 aa14.29□□□□□ -0.12
PCDH8-202ENST00000377942 MAPKAPK5-AS1Q8N8E1 139 aa14.28□□□□□ -0.12
PCDH8-202ENST00000377942 MUC7Q8TAX7 377 aa14.28□□□□□ -0.12
PCDH8-202ENST00000377942 UBE2D1P51668 147 aa14.28□□□□□ -0.12
PCDH8-202ENST00000377942 C1orf158Q8N1D5 194 aa14.27□□□□□ -0.12
PCDH8-202ENST00000377942 Q8N2B8 174 aa14.27□□□□□ -0.12
PCDH8-202ENST00000377942 TP73-AS1Q9UF72 201 aa14.27□□□□□ -0.13
PCDH8-202ENST00000377942 FN1P02751 2386 aaKnown RBP14.27□□□□□ -0.13
PCDH8-202ENST00000377942 IGLV4-69A0A075B6H9 119 aa14.26□□□□□ -0.13
PCDH8-202ENST00000377942 TCL1BO95988 128 aa14.26□□□□□ -0.13
PCDH8-202ENST00000377942 NANOS2P60321 138 aaKnown RBP14.26□□□□□ -0.13
PCDH8-202ENST00000377942 CDC42SE2Q9NRR3 84 aa14.26□□□□□ -0.13
PCDH8-202ENST00000377942 XAGE1AQ9HD64 81 aa14.26□□□□□ -0.13
PCDH8-202ENST00000377942 A0A087WZ39 114 aa14.25□□□□□ -0.13
PCDH8-202ENST00000377942 GAS8-AS1O95177 125 aa14.24□□□□□ -0.13
PCDH8-202ENST00000377942 FAM19A1Q7Z5A9 133 aa14.24□□□□□ -0.13
PCDH8-202ENST00000377942 LRRK2Q5S007 2527 aa14.24□□□□□ -0.13
PCDH8-202ENST00000377942 CENPFP49454 3210 aa14.23□□□□□ -0.13
PCDH8-202ENST00000377942 PRB2P02812 416 aaPredicted RBP14.23□□□□□ -0.13
PCDH8-202ENST00000377942 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.23□□□□□ -0.13
PCDH8-202ENST00000377942 IGIPA6NJ69 53 aa14.23□□□□□ -0.13
PCDH8-202ENST00000377942 IGKV3D-7A0A0C4DH55 119 aa14.22□□□□□ -0.13
PCDH8-202ENST00000377942 PTH2Q96A98 100 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms