RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 USMG5Q96IX5 58 aa13.11□□□□□ -0.31
TUBGCP3-202ENST00000375669 TINCRA0A1B0GVN0 87 aa13.1□□□□□ -0.31
TUBGCP3-202ENST00000375669 NIPBLQ6KC79 2804 aaeCLIP13.1□□□□□ -0.31
TUBGCP3-202ENST00000375669 FBN2P35556 2912 aa13.1□□□□□ -0.31
TUBGCP3-202ENST00000375669 HIST1H4AP62805 103 aaKnown RBP13.1□□□□□ -0.31
TUBGCP3-202ENST00000375669 USP9XQ93008 2570 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP3-202ENST00000375669 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP3-202ENST00000375669 hADV29S1A0JD25 119 aa13.09□□□□□ -0.31
TUBGCP3-202ENST00000375669 IGKV2-29A2NJV5 120 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP3-202ENST00000375669 ATOX1O00244 68 aa13.09□□□□□ -0.31
TUBGCP3-202ENST00000375669 ZNF625Q96I27 306 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP3-202ENST00000375669 BAALC-AS2P0C853 105 aa13.09□□□□□ -0.31
TUBGCP3-202ENST00000375669 IGHV1OR15-1A0A075B7D0 117 aa13.08□□□□□ -0.32
TUBGCP3-202ENST00000375669 WIPF1O43516 503 aa13.08□□□□□ -0.32
TUBGCP3-202ENST00000375669 RBMY1A1P0DJD3 496 aaKnown RBP13.08□□□□□ -0.32
TUBGCP3-202ENST00000375669 RBMY1CP0DJD4 496 aa13.08□□□□□ -0.32
TUBGCP3-202ENST00000375669 SYNJ2BPP57105 145 aa13.08□□□□□ -0.32
TUBGCP3-202ENST00000375669 TIRAPP58753 221 aa13.08□□□□□ -0.32
TUBGCP3-202ENST00000375669 RBMY1FQ15415 496 aaKnown RBP13.08□□□□□ -0.32
TUBGCP3-202ENST00000375669 SETD2Q9BYW2 2564 aaPredicted RBP13.08□□□□□ -0.32
TUBGCP3-202ENST00000375669 KLRB1Q12918 225 aa13.08□□□□□ -0.32
TUBGCP3-202ENST00000375669 AVPP01185 164 aa13.07□□□□□ -0.32
TUBGCP3-202ENST00000375669 BEAN1Q3B7T3 259 aa13.07□□□□□ -0.32
TUBGCP3-202ENST00000375669 TRACP01848 142 aa13.07□□□□□ -0.32
TUBGCP3-202ENST00000375669 Q6ZSN1 163 aa13.07□□□□□ -0.32
TUBGCP3-202ENST00000375669 C22orf24Q9Y442 160 aa13.06□□□□□ -0.32
TUBGCP3-202ENST00000375669 LINC00308Q8TCZ7 52 aa13.06□□□□□ -0.32
TUBGCP3-202ENST00000375669 CIRBPQ14011 172 aaKnown RBP13.05□□□□□ -0.32
TUBGCP3-202ENST00000375669 CYSTM1Q9H1C7 97 aa13.05□□□□□ -0.32
TUBGCP3-202ENST00000375669 CFAP46Q8IYW2 2715 aa13.05□□□□□ -0.32
TUBGCP3-202ENST00000375669 NDUFA1O15239 70 aa13.04□□□□□ -0.32
TUBGCP3-202ENST00000375669 IGLV1-40P01703 118 aa13.04□□□□□ -0.32
TUBGCP3-202ENST00000375669 INAFM2P0DMQ5 153 aa13.04□□□□□ -0.32
TUBGCP3-202ENST00000375669 Q8N2B8 174 aa13.04□□□□□ -0.32
TUBGCP3-202ENST00000375669 WNK1Q9H4A3 2382 aa13.04□□□□□ -0.32
TUBGCP3-202ENST00000375669 TRAV25A0A0B4J276 109 aa13.04□□□□□ -0.32
TUBGCP3-202ENST00000375669 SNRPD3P62318 126 aaKnown RBP13.04□□□□□ -0.32
TUBGCP3-202ENST00000375669 TLN2Q9Y4G6 2542 aa13.04□□□□□ -0.32
TUBGCP3-202ENST00000375669 A6NDX4 124 aa13.04□□□□□ -0.32
TUBGCP3-202ENST00000375669 FAM222AQ5U5X8 452 aa13.03□□□□□ -0.32
TUBGCP3-202ENST00000375669 DPH3Q96FX2 82 aa13.03□□□□□ -0.32
TUBGCP3-202ENST00000375669 RPL18AQ02543 176 aaKnown RBP13.02□□□□□ -0.33
TUBGCP3-202ENST00000375669 KIR2DL5BQ8NHK3 375 aa13.02□□□□□ -0.33
TUBGCP3-202ENST00000375669 NBPF19A0A087WUL8 3843 aa13.01□□□□□ -0.33
TUBGCP3-202ENST00000375669 IGHV4-59P01825 116 aa13.01□□□□□ -0.33
TUBGCP3-202ENST00000375669 TMEM258P61165 79 aa13.01□□□□□ -0.33
TUBGCP3-202ENST00000375669 MAPK1IP1LQ8NDC0 245 aa13.01□□□□□ -0.33
TUBGCP3-202ENST00000375669 CDKN2A-AS1Q9UH64 79 aa13.01□□□□□ -0.33
TUBGCP3-202ENST00000375669 IGHV4-30-2A0A087WSY4 118 aa13.01□□□□□ -0.33
TUBGCP3-202ENST00000375669 TRAV13-1A0A0B4J241 112 aa13.01□□□□□ -0.33
TUBGCP3-202ENST00000375669 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.01□□□□□ -0.33
TUBGCP3-202ENST00000375669 CHD6Q8TD26 2715 aa13□□□□□ -0.33
TUBGCP3-202ENST00000375669 DEFB136Q30KP8 78 aa13□□□□□ -0.33
TUBGCP3-202ENST00000375669 UBE2D4Q9Y2X8 147 aa13□□□□□ -0.33
TUBGCP3-202ENST00000375669 FAM218AQ96MZ4 157 aa13□□□□□ -0.33
TUBGCP3-202ENST00000375669 LINC00467Q9BRT7 94 aa12.99□□□□□ -0.33
TUBGCP3-202ENST00000375669 JMJD1CQ15652 2540 aa12.99□□□□□ -0.33
TUBGCP3-202ENST00000375669 K7EQG2 157 aa12.98□□□□□ -0.33
TUBGCP3-202ENST00000375669 SOSTDC1Q6X4U4 206 aa12.98□□□□□ -0.33
TUBGCP3-202ENST00000375669 NF1P21359 2839 aa12.98□□□□□ -0.33
TUBGCP3-202ENST00000375669 CHCHD7Q9BUK0 85 aa12.98□□□□□ -0.33
TUBGCP3-202ENST00000375669 Q9H8V8 135 aa12.98□□□□□ -0.33
TUBGCP3-202ENST00000375669 MYO18BQ8IUG5 2567 aa12.97□□□□□ -0.33
TUBGCP3-202ENST00000375669 MALP21145 153 aa12.97□□□□□ -0.33
TUBGCP3-202ENST00000375669 PSMB8P28062 276 aa12.97□□□□□ -0.33
TUBGCP3-202ENST00000375669 NBL1P41271 181 aa12.97□□□□□ -0.33
TUBGCP3-202ENST00000375669 SERP2Q8N6R1 65 aa12.97□□□□□ -0.33
TUBGCP3-202ENST00000375669 CFHR3Q02985 330 aa12.97□□□□□ -0.33
TUBGCP3-202ENST00000375669 PTPN13Q12923 2485 aa12.97□□□□□ -0.33
TUBGCP3-202ENST00000375669 C18orf65Q6ZTR6 163 aa12.97□□□□□ -0.33
TUBGCP3-202ENST00000375669 COPS9Q8WXC6 57 aa12.97□□□□□ -0.33
TUBGCP3-202ENST00000375669 UPK3BQ9BT76 320 aa12.97□□□□□ -0.33
TUBGCP3-202ENST00000375669 H3BUA1 57 aa12.96□□□□□ -0.33
TUBGCP3-202ENST00000375669 DEFB131AP59861 70 aa12.96□□□□□ -0.33
TUBGCP3-202ENST00000375669 COX6A2Q02221 97 aa12.96□□□□□ -0.33
TUBGCP3-202ENST00000375669 K7EMT4 169 aa12.96□□□□□ -0.34
TUBGCP3-202ENST00000375669 RS1O15537 224 aa12.96□□□□□ -0.34
TUBGCP3-202ENST00000375669 Q9HAA7 133 aa12.96□□□□□ -0.34
TUBGCP3-202ENST00000375669 EPG5Q9HCE0 2579 aa12.95□□□□□ -0.34
TUBGCP3-202ENST00000375669 IGLV5-45A0A087WSX0 123 aa12.95□□□□□ -0.34
TUBGCP3-202ENST00000375669 OXTP01178 125 aa12.95□□□□□ -0.34
TUBGCP3-202ENST00000375669 PRIMA1Q86XR5 153 aa12.95□□□□□ -0.34
TUBGCP3-202ENST00000375669 PIMREGQ9BSJ6 248 aa12.95□□□□□ -0.34
TUBGCP3-202ENST00000375669 IGKV3D-7A0A0C4DH55 119 aa12.94□□□□□ -0.34
TUBGCP3-202ENST00000375669 DSCR8Q96T75 97 aa12.94□□□□□ -0.34
TUBGCP3-202ENST00000375669 CACNA1AO00555 2505 aa12.94□□□□□ -0.34
TUBGCP3-202ENST00000375669 FAM208BQ5VWN6 2430 aa12.94□□□□□ -0.34
TUBGCP3-202ENST00000375669 GNLYP22749 145 aa12.94□□□□□ -0.34
TUBGCP3-202ENST00000375669 TEX15Q9BXT5 2789 aa12.93□□□□□ -0.34
TUBGCP3-202ENST00000375669 DNAL4O96015 105 aa12.93□□□□□ -0.34
TUBGCP3-202ENST00000375669 DEFB112Q30KQ8 113 aa12.93□□□□□ -0.34
TUBGCP3-202ENST00000375669 SONP18583 2426 aaKnown RBP12.93□□□□□ -0.34
TUBGCP3-202ENST00000375669 ZNF469Q96JG9 3925 aaPredicted RBP12.93□□□□□ -0.34
TUBGCP3-202ENST00000375669 IGHV3OR16-12A0A075B7B8 117 aa12.92□□□□□ -0.34
TUBGCP3-202ENST00000375669 HOXD3P31249 432 aaPredicted RBP12.92□□□□□ -0.34
TUBGCP3-202ENST00000375669 C4orf26Q17RF5 130 aa12.92□□□□□ -0.34
TUBGCP3-202ENST00000375669 Q6JHZ5 121 aa12.92□□□□□ -0.34
TUBGCP3-202ENST00000375669 CCL19Q99731 98 aa12.92□□□□□ -0.34
TUBGCP3-202ENST00000375669 ACACBO00763 2458 aa12.92□□□□□ -0.34
TUBGCP3-202ENST00000375669 IGLV5-39A0A0G2JS06 123 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms