RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 UBE2D2P62837 147 aa8.83□□□□□ -1
UBR4-203ENST00000375225 C1orf158Q8N1D5 194 aa8.83□□□□□ -1
UBR4-203ENST00000375225 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.83□□□□□ -1
UBR4-203ENST00000375225 ATP6V0E2Q8NHE4 81 aa8.83□□□□□ -1
UBR4-203ENST00000375225 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.82□□□□□ -1
UBR4-203ENST00000375225 IGKV2-29A2NJV5 120 aaPredicted RBP8.82□□□□□ -1
UBR4-203ENST00000375225 CYSRT1A8MQ03 144 aa8.82□□□□□ -1
UBR4-203ENST00000375225 TIMM17BO60830 172 aa8.82□□□□□ -1
UBR4-203ENST00000375225 SCGB1C2P0DMR2 95 aa8.82□□□□□ -1
UBR4-203ENST00000375225 PSMB2P49721 201 aa8.82□□□□□ -1
UBR4-203ENST00000375225 HERVK_113P63121 156 aa8.82□□□□□ -1
UBR4-203ENST00000375225 SPANXDQ9BXN6 97 aa8.82□□□□□ -1
UBR4-203ENST00000375225 SPANXCQ9NY87 97 aa8.82□□□□□ -1
UBR4-203ENST00000375225 ERG28Q9UKR5 140 aa8.82□□□□□ -1
UBR4-203ENST00000375225 CSDC2Q9Y534 153 aaKnown RBP8.82□□□□□ -1
UBR4-203ENST00000375225 NF1P21359 2839 aa8.82□□□□□ -1
UBR4-203ENST00000375225 IGHV3-64A0A075B6Q5 118 aa8.81□□□□□ -1
UBR4-203ENST00000375225 A0A0J9YXY3 114 aa8.81□□□□□ -1
UBR4-203ENST00000375225 CIRBPQ14011 172 aaKnown RBP8.81□□□□□ -1
UBR4-203ENST00000375225 Q6ZSN1 163 aa8.81□□□□□ -1
UBR4-203ENST00000375225 VSIG2Q96IQ7 327 aa8.81□□□□□ -1
UBR4-203ENST00000375225 NDUFA12Q9UI09 145 aa8.81□□□□□ -1
UBR4-203ENST00000375225 SETXQ7Z333 2677 aaKnown RBP8.81□□□□□ -1
UBR4-203ENST00000375225 TEX48A0A1B0GUV7 120 aa8.8□□□□□ -1
UBR4-203ENST00000375225 ADARB2-AS1A8MUL3 147 aa8.8□□□□□ -1
UBR4-203ENST00000375225 H7C423 109 aa8.8□□□□□ -1
UBR4-203ENST00000375225 IGLV1-51P01701 117 aa8.8□□□□□ -1
UBR4-203ENST00000375225 PF4P02776 101 aa8.8□□□□□ -1
UBR4-203ENST00000375225 IFITM1P13164 125 aa8.8□□□□□ -1
UBR4-203ENST00000375225 Q6ZUT4 128 aa8.8□□□□□ -1
UBR4-203ENST00000375225 RNF183Q96D59 192 aa8.8□□□□□ -1
UBR4-203ENST00000375225 TMEM101Q96IK0 257 aa8.8□□□□□ -1
UBR4-203ENST00000375225 NACAE9PAV3 2078 aa8.8□□□□□ -1
UBR4-203ENST00000375225 IGLV5-45A0A087WSX0 123 aa8.8□□□□□ -1
UBR4-203ENST00000375225 A4D1N5 150 aa8.8□□□□□ -1
UBR4-203ENST00000375225 UBE2L6O14933 153 aa8.8□□□□□ -1
UBR4-203ENST00000375225 KRTAP10-3P60369 221 aa8.8□□□□□ -1
UBR4-203ENST00000375225 WFDC2Q14508 124 aa8.8□□□□□ -1
UBR4-203ENST00000375225 ZFAND6Q6FIF0 208 aa8.8□□□□□ -1
UBR4-203ENST00000375225 MUSTN1Q8IVN3 82 aa8.8□□□□□ -1
UBR4-203ENST00000375225 GTSF1LQ9H1H1 148 aa8.8□□□□□ -1
UBR4-203ENST00000375225 IGHV3-38A0A0C4DH36 116 aa8.79□□□□□ -1
UBR4-203ENST00000375225 PRM2P04554 102 aa8.79□□□□□ -1
UBR4-203ENST00000375225 OXLD1Q5BKU9 147 aa8.79□□□□□ -1
UBR4-203ENST00000375225 FAM19A3Q7Z5A8 133 aa8.79□□□□□ -1
UBR4-203ENST00000375225 SORL1Q92673 2214 aa8.78□□□□□ -1
UBR4-203ENST00000375225 C2CD3Q4AC94 2353 aa8.78□□□□□ -1
UBR4-203ENST00000375225 TRGV2A0A075B6R0 118 aa8.78□□□□□ -1
UBR4-203ENST00000375225 MIAQ16674 131 aa8.78□□□□□ -1
UBR4-203ENST00000375225 Q1RN00 199 aa8.78□□□□□ -1
UBR4-203ENST00000375225 CEMP1Q6PRD7 247 aaPredicted RBP8.78□□□□□ -1
UBR4-203ENST00000375225 PRO0461Q9UI25 63 aa8.78□□□□□ -1
UBR4-203ENST00000375225 NDUFA1O15239 70 aa8.77□□□□□ -1.01
UBR4-203ENST00000375225 IGHV3-33P01772 117 aa8.77□□□□□ -1.01
UBR4-203ENST00000375225 COX6CP09669 75 aa8.77□□□□□ -1.01
UBR4-203ENST00000375225 SPINK8P0C7L1 97 aa8.77□□□□□ -1.01
UBR4-203ENST00000375225 ETDBQ3ZM63 59 aa8.77□□□□□ -1.01
UBR4-203ENST00000375225 FAM104AQ969W3 186 aa8.77□□□□□ -1.01
UBR4-203ENST00000375225 TMEM243Q9BU79 118 aa8.77□□□□□ -1.01
UBR4-203ENST00000375225 NOP10Q9NPE3 64 aaKnown RBP8.77□□□□□ -1.01
UBR4-203ENST00000375225 TRBV6-4A0A1B0GX49 114 aa8.76□□□□□ -1.01
UBR4-203ENST00000375225 M0QXV9 152 aa8.76□□□□□ -1.01
UBR4-203ENST00000375225 PRSS2P07478 247 aa8.76□□□□□ -1.01
UBR4-203ENST00000375225 ATXN8Q156A1 80 aa8.76□□□□□ -1.01
UBR4-203ENST00000375225 RNASE13Q5GAN3 156 aaKnown RBP8.76□□□□□ -1.01
UBR4-203ENST00000375225 Q6ZTI0 123 aa8.76□□□□□ -1.01
UBR4-203ENST00000375225 CITED1Q99966 193 aa8.76□□□□□ -1.01
UBR4-203ENST00000375225 OVOL2Q9BRP0 275 aa8.76□□□□□ -1.01
UBR4-203ENST00000375225 SETD2Q9BYW2 2564 aaPredicted RBP8.76□□□□□ -1.01
UBR4-203ENST00000375225 TRAV8-3A0A0A6YYJ7 113 aa8.75□□□□□ -1.01
UBR4-203ENST00000375225 TRGV4A0A0C4DH28 118 aa8.75□□□□□ -1.01
UBR4-203ENST00000375225 GAGE12JA6NER3 117 aa8.75□□□□□ -1.01
UBR4-203ENST00000375225 HERV-K104P63124 156 aa8.75□□□□□ -1.01
UBR4-203ENST00000375225 GAGE4Q13068 117 aa8.75□□□□□ -1.01
UBR4-203ENST00000375225 GAGE5Q13069 117 aa8.75□□□□□ -1.01
UBR4-203ENST00000375225 TRBV30A0A0K0K1B3 111 aa8.74□□□□□ -1.01
UBR4-203ENST00000375225 TCL1BO95988 128 aa8.74□□□□□ -1.01
UBR4-203ENST00000375225 SCGB1A1P11684 91 aa8.74□□□□□ -1.01
UBR4-203ENST00000375225 RPL35AP18077 110 aaKnown RBP8.74□□□□□ -1.01
UBR4-203ENST00000375225 SH2D6Q7Z4S9 175 aa8.74□□□□□ -1.01
UBR4-203ENST00000375225 LINC00482Q8N8I6 264 aa8.74□□□□□ -1.01
UBR4-203ENST00000375225 PPDPFLQ8WWR9 84 aa8.74□□□□□ -1.01
UBR4-203ENST00000375225 SIGMAR1Q99720 223 aa8.74□□□□□ -1.01
UBR4-203ENST00000375225 INSL3P51460 131 aa8.73□□□□□ -1.01
UBR4-203ENST00000375225 C21orf62-AS1Q17RA5 79 aa8.73□□□□□ -1.01
UBR4-203ENST00000375225 TEN1Q86WV5 123 aa8.73□□□□□ -1.01
UBR4-203ENST00000375225 SBSPONQ8IVN8 264 aa8.73□□□□□ -1.01
UBR4-203ENST00000375225 LITAFQ99732 161 aa8.73□□□□□ -1.01
UBR4-203ENST00000375225 Q9UF83 564 aa8.73□□□□□ -1.01
UBR4-203ENST00000375225 CDKN2A-AS1Q9UH64 79 aa8.73□□□□□ -1.01
UBR4-203ENST00000375225 WNK1Q9H4A3 2382 aa8.73□□□□□ -1.01
UBR4-203ENST00000375225 GAGE7O76087 117 aa8.72□□□□□ -1.01
UBR4-203ENST00000375225 GAGE12FP0CL80 117 aa8.72□□□□□ -1.01
UBR4-203ENST00000375225 GAGE12GP0CL81 117 aa8.72□□□□□ -1.01
UBR4-203ENST00000375225 GAGE12IP0CL82 117 aa8.72□□□□□ -1.01
UBR4-203ENST00000375225 FOXI1Q12951 378 aa8.72□□□□□ -1.01
UBR4-203ENST00000375225 KRTAP24-1Q3LI83 254 aa8.72□□□□□ -1.01
UBR4-203ENST00000375225 SFTA2Q6UW10 78 aa8.72□□□□□ -1.01
UBR4-203ENST00000375225 PPDPFQ9H3Y8 114 aa8.72□□□□□ -1.01
UBR4-203ENST00000375225 CDC42SE2Q9NRR3 84 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms