RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 CRIP2P52943 208 aaPredicted RBP8.79□□□□□ -1
DEPDC1-201ENST00000370966 C9orf85Q96MD7 179 aa8.79□□□□□ -1
DEPDC1-201ENST00000370966 TMEM256-PLSCR3K7ERE1 68 aa8.79□□□□□ -1
DEPDC1-201ENST00000370966 PIK3CD-AS1Q5SR53 167 aa8.79□□□□□ -1
DEPDC1-201ENST00000370966 ZNF843Q8N446 348 aa8.79□□□□□ -1
DEPDC1-201ENST00000370966 DIRC1Q969H9 104 aa8.79□□□□□ -1
DEPDC1-201ENST00000370966 SPTBN4Q9H254 2564 aa8.79□□□□□ -1
DEPDC1-201ENST00000370966 ATOX1O00244 68 aa8.78□□□□□ -1
DEPDC1-201ENST00000370966 EXPH5Q8NEV8 1989 aa8.78□□□□□ -1
DEPDC1-201ENST00000370966 DEFB105AQ8NG35 78 aa8.78□□□□□ -1
DEPDC1-201ENST00000370966 CRYGDP07320 174 aa8.78□□□□□ -1
DEPDC1-201ENST00000370966 C2orf91Q6ZV80 131 aa8.78□□□□□ -1
DEPDC1-201ENST00000370966 COX8CQ7Z4L0 72 aa8.78□□□□□ -1
DEPDC1-201ENST00000370966 hADV29S1A0JD25 119 aa8.77□□□□□ -1.01
DEPDC1-201ENST00000370966 PDE6GP18545 87 aa8.77□□□□□ -1.01
DEPDC1-201ENST00000370966 UFSP1Q6NVU6 142 aa8.77□□□□□ -1.01
DEPDC1-201ENST00000370966 Q6ZS46 218 aa8.77□□□□□ -1.01
DEPDC1-201ENST00000370966 IBA57-AS1B1ANH7 110 aa8.77□□□□□ -1.01
DEPDC1-201ENST00000370966 TRBV6-8A0A0A6YYG3 113 aa8.77□□□□□ -1.01
DEPDC1-201ENST00000370966 F8W735 103 aaPredicted RBP8.77□□□□□ -1.01
DEPDC1-201ENST00000370966 CHD8Q9HCK8 2581 aa8.77□□□□□ -1.01
DEPDC1-201ENST00000370966 BRI3O95415 125 aa8.76□□□□□ -1.01
DEPDC1-201ENST00000370966 TSHBP01222 138 aa8.76□□□□□ -1.01
DEPDC1-201ENST00000370966 REG3AQ06141 175 aa8.76□□□□□ -1.01
DEPDC1-201ENST00000370966 GOLGB1Q14789 3259 aaKnown RBP8.76□□□□□ -1.01
DEPDC1-201ENST00000370966 NCR3O14931 201 aa8.76□□□□□ -1.01
DEPDC1-201ENST00000370966 RBM3P98179 157 aaKnown RBP8.76□□□□□ -1.01
DEPDC1-201ENST00000370966 LINC00269Q8N2A0 174 aa8.76□□□□□ -1.01
DEPDC1-201ENST00000370966 LINC00308Q8TCZ7 52 aa8.76□□□□□ -1.01
DEPDC1-201ENST00000370966 LINC00643Q86TS7 51 aa8.76□□□□□ -1.01
DEPDC1-201ENST00000370966 TIMM17BO60830 172 aa8.75□□□□□ -1.01
DEPDC1-201ENST00000370966 LINC01006Q8NI28 216 aa8.75□□□□□ -1.01
DEPDC1-201ENST00000370966 TRBV30A0A0K0K1B3 111 aa8.75□□□□□ -1.01
DEPDC1-201ENST00000370966 FAM236AA0A1B0GUQ0 79 aa8.75□□□□□ -1.01
DEPDC1-201ENST00000370966 FAM236BA0A1B0GV22 79 aa8.75□□□□□ -1.01
DEPDC1-201ENST00000370966 IGKV3D-7A0A0C4DH55 119 aa8.75□□□□□ -1.01
DEPDC1-201ENST00000370966 PROK1P58294 105 aa8.75□□□□□ -1.01
DEPDC1-201ENST00000370966 URB1-AS1Q96HZ7 61 aa8.75□□□□□ -1.01
DEPDC1-201ENST00000370966 GAS8-AS1O95177 125 aa8.74□□□□□ -1.01
DEPDC1-201ENST00000370966 MIFP14174 115 aa8.74□□□□□ -1.01
DEPDC1-201ENST00000370966 AVPP01185 164 aa8.74□□□□□ -1.01
DEPDC1-201ENST00000370966 NREPQ16612 68 aa8.74□□□□□ -1.01
DEPDC1-201ENST00000370966 CHCHD10Q8WYQ3 142 aaPredicted RBP8.74□□□□□ -1.01
DEPDC1-201ENST00000370966 ZNF580Q9UK33 172 aa8.74□□□□□ -1.01
DEPDC1-201ENST00000370966 MRGPRG-AS1Q2M3A8 158 aa8.73□□□□□ -1.01
DEPDC1-201ENST00000370966 MRPS36P82909 103 aaKnown RBP8.73□□□□□ -1.01
DEPDC1-201ENST00000370966 Q8N976 141 aa8.73□□□□□ -1.01
DEPDC1-201ENST00000370966 A0A1B0GX51 115 aa8.73□□□□□ -1.01
DEPDC1-201ENST00000370966 J3KT08 172 aa8.73□□□□□ -1.01
DEPDC1-201ENST00000370966 MT-ATP8P03928 68 aa8.73□□□□□ -1.01
DEPDC1-201ENST00000370966 PKD1L2Q7Z442 2459 aa8.73□□□□□ -1.01
DEPDC1-201ENST00000370966 C11orf45Q8TAV5 145 aa8.72□□□□□ -1.01
DEPDC1-201ENST00000370966 LRRK2Q5S007 2527 aa8.72□□□□□ -1.01
DEPDC1-201ENST00000370966 A0A1W2PPR1 153 aa8.72□□□□□ -1.01
DEPDC1-201ENST00000370966 COX7BP24311 80 aa8.71□□□□□ -1.01
DEPDC1-201ENST00000370966 TRIAP1O43715 76 aa8.71□□□□□ -1.02
DEPDC1-201ENST00000370966 IGIPA6NJ69 53 aa8.71□□□□□ -1.02
DEPDC1-201ENST00000370966 HILS1P60008 231 aa8.71□□□□□ -1.02
DEPDC1-201ENST00000370966 UBE2D4Q9Y2X8 147 aa8.71□□□□□ -1.02
DEPDC1-201ENST00000370966 INAFM1C9JVW0 142 aa8.7□□□□□ -1.02
DEPDC1-201ENST00000370966 HIGD2BQ4VC39 106 aa8.7□□□□□ -1.02
DEPDC1-201ENST00000370966 TEX49A0A1B0GTD5 131 aa8.69□□□□□ -1.02
DEPDC1-201ENST00000370966 C18orf65Q6ZTR6 163 aa8.69□□□□□ -1.02
DEPDC1-201ENST00000370966 C14orf132Q9NPU4 83 aa8.69□□□□□ -1.02
DEPDC1-201ENST00000370966 KIR2DL5BQ8NHK3 375 aa8.68□□□□□ -1.02
DEPDC1-201ENST00000370966 NDUFV3P56181 108 aaKnown RBP8.68□□□□□ -1.02
DEPDC1-201ENST00000370966 LINC00482Q8N8I6 264 aa8.68□□□□□ -1.02
DEPDC1-201ENST00000370966 C5orf47Q569G3 176 aa8.67□□□□□ -1.02
DEPDC1-201ENST00000370966 KLK5Q9Y337 293 aaPredicted RBP8.67□□□□□ -1.02
DEPDC1-201ENST00000370966 MTORP42345 2549 aa8.67□□□□□ -1.02
DEPDC1-201ENST00000370966 UBE2D1P51668 147 aa8.67□□□□□ -1.02
DEPDC1-201ENST00000370966 DEFB131BA0A096LNP1 70 aa8.66□□□□□ -1.02
DEPDC1-201ENST00000370966 NDUFB1O75438 58 aa8.66□□□□□ -1.02
DEPDC1-201ENST00000370966 CD164L2Q6UWJ8 174 aa8.66□□□□□ -1.02
DEPDC1-201ENST00000370966 BBC3Q96PG8 261 aaPredicted RBP8.66□□□□□ -1.02
DEPDC1-201ENST00000370966 TMEM258P61165 79 aa8.66□□□□□ -1.02
DEPDC1-201ENST00000370966 ODF3L2Q3SX64 289 aa8.66□□□□□ -1.02
DEPDC1-201ENST00000370966 IGHV4-28A0A0C4DH34 117 aa8.66□□□□□ -1.02
DEPDC1-201ENST00000370966 UBE2D3P61077 147 aa8.66□□□□□ -1.02
DEPDC1-201ENST00000370966 UBE2D2P62837 147 aa8.66□□□□□ -1.02
DEPDC1-201ENST00000370966 C14orf177Q52M58 125 aa8.66□□□□□ -1.02
DEPDC1-201ENST00000370966 SHISA2Q6UWI4 295 aa8.66□□□□□ -1.02
DEPDC1-201ENST00000370966 A8MZ25 164 aa8.65□□□□□ -1.02
DEPDC1-201ENST00000370966 UBE2AP49459 152 aa8.65□□□□□ -1.02
DEPDC1-201ENST00000370966 LY6G6DO95868 133 aa8.64□□□□□ -1.03
DEPDC1-201ENST00000370966 ADAMTS20P59510 1910 aa8.64□□□□□ -1.03
DEPDC1-201ENST00000370966 CDC42SE2Q9NRR3 84 aa8.64□□□□□ -1.03
DEPDC1-201ENST00000370966 A0A096LNJ9 63 aa8.64□□□□□ -1.03
DEPDC1-201ENST00000370966 LST1O00453 97 aa8.64□□□□□ -1.03
DEPDC1-201ENST00000370966 PRM2P04554 102 aa8.64□□□□□ -1.03
DEPDC1-201ENST00000370966 WFDC10AQ9H1F0 79 aa8.64□□□□□ -1.03
DEPDC1-201ENST00000370966 RAI1Q7Z5J4 1906 aaPredicted RBP8.63□□□□□ -1.03
DEPDC1-201ENST00000370966 LINC00959A0A1B0GUT2 108 aa8.63□□□□□ -1.03
DEPDC1-201ENST00000370966 NDUFA7O95182 113 aa8.63□□□□□ -1.03
DEPDC1-201ENST00000370966 MP68P56378 58 aa8.63□□□□□ -1.03
DEPDC1-201ENST00000370966 IL17DQ8TAD2 202 aa8.63□□□□□ -1.03
DEPDC1-201ENST00000370966 SPATA25Q9BR10 227 aa8.63□□□□□ -1.03
DEPDC1-201ENST00000370966 LELP1Q5T871 98 aa8.63□□□□□ -1.03
DEPDC1-201ENST00000370966 ATP5EP2Q5VTU8 51 aa8.62□□□□□ -1.03
DEPDC1-201ENST00000370966 C6orf99Q4VX62 202 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms