RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 UFSP1Q6NVU6 142 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 Q6ZRP5 223 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 NFE4Q86UQ8 179 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 OR5A1Q8NGJ0 315 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 MRAPQ8TCY5 172 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 TRGV1A0A0A0MS02 117 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 TRAV26-2A0A0B4J265 109 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 MT-ND6P03923 174 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 IGLC3P0DOY3 106 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 MIFP14174 115 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 CFAP126Q5VTH2 177 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 LINC00612Q8N6U2 182 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 STPG4Q8N801 248 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 TM2D3Q9BRN9 247 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 KRTAP1-5Q9BYS1 174 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 TP53TG1Q9Y2A0 90 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 U3KQK5 164 aa2.5□□□□□ -2.01
MCF2-202ENST00000370573 PRKDCP78527 4128 aaKnown RBP2.49□□□□□ -2.01
MCF2-202ENST00000370573 IGHV3-73A0A0B4J1V6 119 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 NCR2O95944 276 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 CRYBA4P53673 196 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 CKS1BP61024 79 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 Q0VG73 95 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 LGALS9BQ3B8N2 356 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 FAM222AQ5U5X8 452 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 Q6ZN92 141 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 NEGR1Q7Z3B1 354 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 C11orf45Q8TAV5 145 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 AP1S3Q96PC3 154 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 PMCHL2Q9BQD1 86 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 DPH3P1Q9H4G8 78 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 Q9UF83 564 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 CELA1Q9UNI1 258 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 A8MWV9 139 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 D6R8Y8 96 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 NPYP01303 97 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 IGHV3-53P01767 116 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 MGPP08493 103 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 SRIP30626 198 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 SEC11AP67812 179 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 BATFQ16520 125 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 FAM74A4Q5TZK3 123 aa2.49□□□□□ -2.01
MCF2-202ENST00000370573 STAB2Q8WWQ8 2551 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 TRAV4A0A0B4J268 109 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 A6NDN8 102 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 LYRM9A8MSI8 78 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 M0QY20 66 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 NUPR1O60356 82 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 P0DMU3 169 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 FAM231AP0DMU4 169 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 FAM231CP0DMU5 169 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 DEFB130BP0DP73 79 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 DEFB130AP0DP74 79 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 CKS2P33552 79 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 LINC01547P58512 204 aaPredicted RBP2.48□□□□□ -2.01
MCF2-202ENST00000370573 FA2HQ7L5A8 372 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 RPL39LQ96EH5 51 aaKnown RBP2.48□□□□□ -2.01
MCF2-202ENST00000370573 PRELID3AQ96N28 172 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 B9D2Q9BPU9 175 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 FBN3Q75N90 2809 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 TRGV2A0A075B6R0 118 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 IGHV3-38A0A0C4DH36 116 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 A0A0J9YWU9 116 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 ZNF56Q15929 161 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 C12orf74Q32Q52 190 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 SPATA45Q537H7 98 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 OR10J3Q5JRS4 329 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 ZFP2Q6ZN57 461 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 ORMDL3Q8N138 153 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 C18orf32Q8TCD1 76 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 ST20Q9HBF5 79 aa2.48□□□□□ -2.01
MCF2-202ENST00000370573 SPART-AS1P0CW21 52 aa2.47□□□□□ -2.01
MCF2-202ENST00000370573 C18orf15Q96N68 181 aa2.47□□□□□ -2.01
MCF2-202ENST00000370573 SPANXDQ9BXN6 97 aa2.47□□□□□ -2.01
MCF2-202ENST00000370573 C11orf68Q9H3H3 251 aaKnown RBP2.47□□□□□ -2.01
MCF2-202ENST00000370573 IGLV2-18A0A075B6J9 118 aa2.47□□□□□ -2.01
MCF2-202ENST00000370573 TRAV9-2A0A087WT02 112 aa2.47□□□□□ -2.01
MCF2-202ENST00000370573 LOC100131303A0A0U1RQF7 123 aa2.47□□□□□ -2.01
MCF2-202ENST00000370573 LOC389332A0A1B0GUA5 103 aa2.47□□□□□ -2.01
MCF2-202ENST00000370573 K7EQD1 137 aa2.47□□□□□ -2.01
MCF2-202ENST00000370573 IFI27P40305 119 aaPredicted RBP2.47□□□□□ -2.01
MCF2-202ENST00000370573 DAD1P61803 113 aa2.47□□□□□ -2.01
MCF2-202ENST00000370573 HSD52Q0P140 79 aa2.47□□□□□ -2.01
MCF2-202ENST00000370573 SLC25A29Q8N8R3 303 aa2.47□□□□□ -2.01
MCF2-202ENST00000370573 DEFB104AQ8WTQ1 72 aa2.47□□□□□ -2.01
MCF2-202ENST00000370573 EDA2RQ9HAV5 297 aa2.47□□□□□ -2.01
MCF2-202ENST00000370573 TGP01266 2768 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 TRBV6-5A0A0K0K1A5 114 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 TAX1BP3O14907 124 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 SERF1AO75920 110 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 POLR2KP53803 58 aaKnown RBP2.46□□□□□ -2.02
MCF2-202ENST00000370573 C5orf47Q569G3 176 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 LINC00242Q5T6M2 205 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 BAGE3Q86Y29 109 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 PYGO1Q9Y3Y4 419 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 TRGV4A0A0C4DH28 118 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 SMIM1B2RUZ4 78 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 K7EP34 96 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 REG3GQ6UW15 175 aa2.46□□□□□ -2.02
MCF2-202ENST00000370573 Q6ZTC4 211 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms