RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 FAM222AQ5U5X8 452 aa13.59□□□□□ -0.23
PRDM1-202ENST00000369091 SERP2Q8N6R1 65 aa13.59□□□□□ -0.23
PRDM1-202ENST00000369091 Q8NA96 180 aa13.59□□□□□ -0.23
PRDM1-202ENST00000369091 Q6ZSN1 163 aa13.58□□□□□ -0.24
PRDM1-202ENST00000369091 F5H768 121 aa13.58□□□□□ -0.24
PRDM1-202ENST00000369091 LINC00846Q9NV44 126 aa13.57□□□□□ -0.24
PRDM1-202ENST00000369091 LINC01561Q8N1V8 128 aa13.57□□□□□ -0.24
PRDM1-202ENST00000369091 MOB4Q9Y3A3 225 aa13.57□□□□□ -0.24
PRDM1-202ENST00000369091 USP17L23D6RBM5 183 aa13.54□□□□□ -0.24
PRDM1-202ENST00000369091 IGF2RP11717 2491 aa13.54□□□□□ -0.24
PRDM1-202ENST00000369091 A0A087WYN8 130 aa13.54□□□□□ -0.24
PRDM1-202ENST00000369091 SYNJ2BPP57105 145 aa13.53□□□□□ -0.24
PRDM1-202ENST00000369091 C10orf105Q8TEF2 133 aa13.53□□□□□ -0.24
PRDM1-202ENST00000369091 DOPEY2Q9Y3R5 2298 aa13.53□□□□□ -0.24
PRDM1-202ENST00000369091 RBMY1A1P0DJD3 496 aaKnown RBP13.53□□□□□ -0.24
PRDM1-202ENST00000369091 RBMY1CP0DJD4 496 aa13.53□□□□□ -0.24
PRDM1-202ENST00000369091 RBMY1FQ15415 496 aaKnown RBP13.53□□□□□ -0.24
PRDM1-202ENST00000369091 LY6EQ16553 131 aa13.53□□□□□ -0.24
PRDM1-202ENST00000369091 SORL1Q92673 2214 aa13.53□□□□□ -0.24
PRDM1-202ENST00000369091 IGLV5-45A0A087WSX0 123 aa13.52□□□□□ -0.24
PRDM1-202ENST00000369091 Q6JHZ5 121 aa13.52□□□□□ -0.24
PRDM1-202ENST00000369091 COL6A6A6NMZ7 2263 aa13.52□□□□□ -0.24
PRDM1-202ENST00000369091 IGLV5-39A0A0G2JS06 123 aa13.52□□□□□ -0.25
PRDM1-202ENST00000369091 CACNA1AO00555 2505 aa13.52□□□□□ -0.25
PRDM1-202ENST00000369091 IGHV3OR16-12A0A075B7B8 117 aa13.51□□□□□ -0.25
PRDM1-202ENST00000369091 CDSNQ15517 529 aa13.51□□□□□ -0.25
PRDM1-202ENST00000369091 FHL2Q14192 279 aa13.51□□□□□ -0.25
PRDM1-202ENST00000369091 C11orf71Q6IPW1 123 aa13.51□□□□□ -0.25
PRDM1-202ENST00000369091 HILS1P60008 231 aa13.5□□□□□ -0.25
PRDM1-202ENST00000369091 LINC00242Q5T6M2 205 aa13.5□□□□□ -0.25
PRDM1-202ENST00000369091 BRD3OSQ6XYD6 125 aa13.5□□□□□ -0.25
PRDM1-202ENST00000369091 SMIM1B2RUZ4 78 aa13.49□□□□□ -0.25
PRDM1-202ENST00000369091 HIST2H2BCQ6DN03 193 aa13.49□□□□□ -0.25
PRDM1-202ENST00000369091 HIST2H2BDQ6DRA6 164 aa13.49□□□□□ -0.25
PRDM1-202ENST00000369091 USMG5Q96IX5 58 aa13.49□□□□□ -0.25
PRDM1-202ENST00000369091 NCR3O14931 201 aa13.48□□□□□ -0.25
PRDM1-202ENST00000369091 DGAT2L7PQ6IED9 249 aa13.48□□□□□ -0.25
PRDM1-202ENST00000369091 PTPRQQ9UMZ3 2332 aa13.48□□□□□ -0.25
PRDM1-202ENST00000369091 LINC00337Q8N6G1 96 aa13.48□□□□□ -0.25
PRDM1-202ENST00000369091 PIMREGQ9BSJ6 248 aa13.47□□□□□ -0.25
PRDM1-202ENST00000369091 WFDC9Q8NEX5 89 aa13.47□□□□□ -0.25
PRDM1-202ENST00000369091 RPL28P46779 137 aaKnown RBP13.46□□□□□ -0.25
PRDM1-202ENST00000369091 BLCAPP62952 87 aa13.46□□□□□ -0.25
PRDM1-202ENST00000369091 COPS9Q8WXC6 57 aa13.46□□□□□ -0.25
PRDM1-202ENST00000369091 CRPP02741 224 aa13.45□□□□□ -0.26
PRDM1-202ENST00000369091 AKAP6Q13023 2319 aa13.45□□□□□ -0.26
PRDM1-202ENST00000369091 SLPIP03973 132 aa13.45□□□□□ -0.26
PRDM1-202ENST00000369091 SNRPD3P62318 126 aaKnown RBP13.45□□□□□ -0.26
PRDM1-202ENST00000369091 IGKV2-28A0A075B6P5 120 aa13.44□□□□□ -0.26
PRDM1-202ENST00000369091 IGKV2D-28P01615 120 aa13.44□□□□□ -0.26
PRDM1-202ENST00000369091 ACACBO00763 2458 aa13.44□□□□□ -0.26
PRDM1-202ENST00000369091 ZNF415Q09FC8 603 aa13.43□□□□□ -0.26
PRDM1-202ENST00000369091 SMIM11BQ8TCY0 68 aa13.43□□□□□ -0.26
PRDM1-202ENST00000369091 SPTAN1Q13813 2472 aaKnown RBP13.43□□□□□ -0.26
PRDM1-202ENST00000369091 CCL21O00585 134 aa13.43□□□□□ -0.26
PRDM1-202ENST00000369091 TRAV13-2A0A0B4J235 113 aa13.42□□□□□ -0.26
PRDM1-202ENST00000369091 K7EQG2 157 aa13.42□□□□□ -0.26
PRDM1-202ENST00000369091 OBSCN-AS1Q96MR7 158 aa13.42□□□□□ -0.26
PRDM1-202ENST00000369091 COL12A1Q99715 3063 aa13.41□□□□□ -0.26
PRDM1-202ENST00000369091 LECT2O14960 151 aa13.41□□□□□ -0.26
PRDM1-202ENST00000369091 TRAV23DV6A0A075B6W5 121 aa13.41□□□□□ -0.26
PRDM1-202ENST00000369091 GHRHP01286 108 aa13.41□□□□□ -0.26
PRDM1-202ENST00000369091 NBASA2RRP1 2371 aa13.41□□□□□ -0.26
PRDM1-202ENST00000369091 BPESC1Q9GZL8 116 aa13.4□□□□□ -0.26
PRDM1-202ENST00000369091 SPTA1P02549 2419 aa13.4□□□□□ -0.26
PRDM1-202ENST00000369091 A0A1W2PPR1 153 aa13.4□□□□□ -0.26
PRDM1-202ENST00000369091 K7EMT4 169 aa13.4□□□□□ -0.26
PRDM1-202ENST00000369091 LMO4P61968 165 aa13.4□□□□□ -0.26
PRDM1-202ENST00000369091 MIR7-3HGQ8N6C7 128 aa13.4□□□□□ -0.26
PRDM1-202ENST00000369091 TLN1Q9Y490 2541 aaKnown RBP13.39□□□□□ -0.27
PRDM1-202ENST00000369091 PRORYQ9H606 182 aa13.39□□□□□ -0.27
PRDM1-202ENST00000369091 VPS13CQ709C8 3753 aa13.39□□□□□ -0.27
PRDM1-202ENST00000369091 Q96MF0 132 aa13.39□□□□□ -0.27
PRDM1-202ENST00000369091 SND1-IT1Q9HBX3 110 aa13.39□□□□□ -0.27
PRDM1-202ENST00000369091 EPG5Q9HCE0 2579 aa13.39□□□□□ -0.27
PRDM1-202ENST00000369091 H3BUA1 57 aa13.38□□□□□ -0.27
PRDM1-202ENST00000369091 C10orf99Q6UWK7 81 aa13.38□□□□□ -0.27
PRDM1-202ENST00000369091 H3BUX3 64 aa13.37□□□□□ -0.27
PRDM1-202ENST00000369091 FAM19A1Q7Z5A9 133 aa13.37□□□□□ -0.27
PRDM1-202ENST00000369091 C20orf197Q8N268 126 aa13.37□□□□□ -0.27
PRDM1-202ENST00000369091 IGLV1-40P01703 118 aa13.36□□□□□ -0.27
PRDM1-202ENST00000369091 TMEM243Q9BU79 118 aa13.36□□□□□ -0.27
PRDM1-202ENST00000369091 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRDM1-202ENST00000369091 PFN2P35080 140 aa13.36□□□□□ -0.27
PRDM1-202ENST00000369091 CFHR3Q02985 330 aa13.35□□□□□ -0.27
PRDM1-202ENST00000369091 OVOL2Q9BRP0 275 aa13.35□□□□□ -0.27
PRDM1-202ENST00000369091 IGHV3-53P01767 116 aa13.35□□□□□ -0.27
PRDM1-202ENST00000369091 PF4P02776 101 aa13.35□□□□□ -0.27
PRDM1-202ENST00000369091 K7ENP7 123 aa13.34□□□□□ -0.27
PRDM1-202ENST00000369091 SS18Q15532 418 aa13.34□□□□□ -0.27
PRDM1-202ENST00000369091 RPL36AP83881 106 aaKnown RBP13.34□□□□□ -0.27
PRDM1-202ENST00000369091 RPL36ALQ969Q0 106 aaKnown RBP13.34□□□□□ -0.27
PRDM1-202ENST00000369091 IGHV4-38-2P0DP08 117 aa13.33□□□□□ -0.28
PRDM1-202ENST00000369091 ENHOQ6UWT2 76 aa13.33□□□□□ -0.28
PRDM1-202ENST00000369091 MRAPQ8TCY5 172 aa13.33□□□□□ -0.28
PRDM1-202ENST00000369091 TOMM7Q9P0U1 55 aa13.33□□□□□ -0.28
PRDM1-202ENST00000369091 RBMY1BA6NDE4 496 aaKnown RBP13.32□□□□□ -0.28
PRDM1-202ENST00000369091 RBMY1EA6NEQ0 496 aaKnown RBP13.32□□□□□ -0.28
PRDM1-202ENST00000369091 RBMY1DP0C7P1 496 aaKnown RBP13.32□□□□□ -0.28
PRDM1-202ENST00000369091 FBXL19-AS1Q494R0 122 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms