RNA–Protein interactions for RNA: ENST00000349157.10

PUF60-202, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PUF60, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-202ENST00000349157 UBE2L6O14933 153 aa13.83□□□□□ -0.2
PUF60-202ENST00000349157 LINC00694P0DN24 101 aa13.83□□□□□ -0.2
PUF60-202ENST00000349157 SPATA3Q8NHX4 192 aa13.83□□□□□ -0.2
PUF60-202ENST00000349157 TMEM101Q96IK0 257 aa13.83□□□□□ -0.2
PUF60-202ENST00000349157 SPANXB1Q9NS25 103 aaPredicted RBP13.83□□□□□ -0.2
PUF60-202ENST00000349157 GEMIN7Q9H840 131 aaKnown RBP13.83□□□□□ -0.2
PUF60-202ENST00000349157 UBE2D1P51668 147 aa13.82□□□□□ -0.2
PUF60-202ENST00000349157 HERVK_113P63121 156 aa13.82□□□□□ -0.2
PUF60-202ENST00000349157 Q6ZUT4 128 aa13.82□□□□□ -0.2
PUF60-202ENST00000349157 TEP1Q99973 2627 aaKnown RBP13.81□□□□□ -0.2
PUF60-202ENST00000349157 IGLV5-45A0A087WSX0 123 aa13.81□□□□□ -0.2
PUF60-202ENST00000349157 C9orf118A6NHY6 69 aa13.81□□□□□ -0.2
PUF60-202ENST00000349157 NTM-AS1Q6ZSK4 140 aa13.81□□□□□ -0.2
PUF60-202ENST00000349157 OR5A1Q8NGJ0 315 aa13.81□□□□□ -0.2
PUF60-202ENST00000349157 TEX48A0A1B0GUV7 120 aa13.8□□□□□ -0.2
PUF60-202ENST00000349157 AMMECR1LQ6DCA0 310 aa13.8□□□□□ -0.2
PUF60-202ENST00000349157 CEMP1Q6PRD7 247 aaPredicted RBP13.8□□□□□ -0.2
PUF60-202ENST00000349157 PRO0255Q9UI72 69 aa13.8□□□□□ -0.2
PUF60-202ENST00000349157 IGHV1-58A0A0C4DH39 117 aa13.8□□□□□ -0.2
PUF60-202ENST00000349157 A8MZ25 164 aa13.8□□□□□ -0.2
PUF60-202ENST00000349157 DEFB130BP0DP73 79 aa13.8□□□□□ -0.2
PUF60-202ENST00000349157 DEFB130AP0DP74 79 aa13.8□□□□□ -0.2
PUF60-202ENST00000349157 UBE2V1Q13404 147 aa13.8□□□□□ -0.2
PUF60-202ENST00000349157 KRTAP24-1Q3LI83 254 aa13.8□□□□□ -0.2
PUF60-202ENST00000349157 C3orf56Q8N813 242 aa13.8□□□□□ -0.2
PUF60-202ENST00000349157 RNF183Q96D59 192 aa13.79□□□□□ -0.2
PUF60-202ENST00000349157 FXYD2P54710 66 aa13.78□□□□□ -0.2
PUF60-202ENST00000349157 VAMP3Q15836 100 aa13.78□□□□□ -0.2
PUF60-202ENST00000349157 A0A0J9YY99 117 aa13.78□□□□□ -0.2
PUF60-202ENST00000349157 SRSF9Q13242 221 aaKnown RBP eCLIP13.78□□□□□ -0.2
PUF60-202ENST00000349157 DEFB135Q30KP9 77 aa13.78□□□□□ -0.2
PUF60-202ENST00000349157 CDC42SE2Q9NRR3 84 aa13.78□□□□□ -0.2
PUF60-202ENST00000349157 TRBV6-8A0A0A6YYG3 113 aa13.77□□□□□ -0.21
PUF60-202ENST00000349157 IGHV4-30-4P0DP06 118 aa13.77□□□□□ -0.21
PUF60-202ENST00000349157 FAM222AQ5U5X8 452 aa13.77□□□□□ -0.21
PUF60-202ENST00000349157 JMJD1CQ15652 2540 aa13.76□□□□□ -0.21
PUF60-202ENST00000349157 A0A1B0GWB2 263 aa13.76□□□□□ -0.21
PUF60-202ENST00000349157 IGHV3-30-3P0DP02 117 aa13.76□□□□□ -0.21
PUF60-202ENST00000349157 EGFEM1PQ0D2K5 195 aa13.76□□□□□ -0.21
PUF60-202ENST00000349157 F8P00451 2351 aa13.75□□□□□ -0.21
PUF60-202ENST00000349157 ATP6V0E2Q8NHE4 81 aa13.75□□□□□ -0.21
PUF60-202ENST00000349157 VSIG2Q96IQ7 327 aa13.75□□□□□ -0.21
PUF60-202ENST00000349157 IGHV4-28A0A0C4DH34 117 aa13.74□□□□□ -0.21
PUF60-202ENST00000349157 TMEM238C9JI98 176 aa13.74□□□□□ -0.21
PUF60-202ENST00000349157 SPART-AS1P0CW21 52 aa13.74□□□□□ -0.21
PUF60-202ENST00000349157 TSPEAR-AS2P59090 65 aa13.74□□□□□ -0.21
PUF60-202ENST00000349157 GTF2H5Q6ZYL4 71 aa13.74□□□□□ -0.21
PUF60-202ENST00000349157 Q8NAQ8 132 aa13.74□□□□□ -0.21
PUF60-202ENST00000349157 DAD1P61803 113 aa13.73□□□□□ -0.21
PUF60-202ENST00000349157 Q6ZVH6 145 aa13.73□□□□□ -0.21
PUF60-202ENST00000349157 NHP2Q9NX24 153 aaKnown RBP13.73□□□□□ -0.21
PUF60-202ENST00000349157 LOC100131303A0A0U1RQF7 123 aa13.72□□□□□ -0.21
PUF60-202ENST00000349157 RNASE13Q5GAN3 156 aaKnown RBP13.72□□□□□ -0.21
PUF60-202ENST00000349157 SH2D6Q7Z4S9 175 aa13.72□□□□□ -0.21
PUF60-202ENST00000349157 TRAV26-1A0A087WT03 109 aa13.71□□□□□ -0.21
PUF60-202ENST00000349157 ATP5G1P05496 136 aa13.71□□□□□ -0.21
PUF60-202ENST00000349157 GYPEP15421 78 aa13.71□□□□□ -0.21
PUF60-202ENST00000349157 C12orf74Q32Q52 190 aa13.71□□□□□ -0.21
PUF60-202ENST00000349157 LINC00242Q5T6M2 205 aa13.71□□□□□ -0.21
PUF60-202ENST00000349157 PAX4O43316 350 aa13.71□□□□□ -0.22
PUF60-202ENST00000349157 ZFAND6Q6FIF0 208 aa13.7□□□□□ -0.22
PUF60-202ENST00000349157 FABP2P12104 132 aa13.69□□□□□ -0.22
PUF60-202ENST00000349157 H3BUT2 72 aa13.69□□□□□ -0.22
PUF60-202ENST00000349157 TIMM17BO60830 172 aa13.69□□□□□ -0.22
PUF60-202ENST00000349157 CHCHD5Q9BSY4 110 aa13.69□□□□□ -0.22
PUF60-202ENST00000349157 CDKN2A-AS1Q9UH64 79 aa13.69□□□□□ -0.22
PUF60-202ENST00000349157 NOTCH3Q9UM47 2321 aa13.68□□□□□ -0.22
PUF60-202ENST00000349157 IGLV5-39A0A0G2JS06 123 aa13.68□□□□□ -0.22
PUF60-202ENST00000349157 A0A1B0GUV1 79 aa13.68□□□□□ -0.22
PUF60-202ENST00000349157 A0A1W2PPM0 123 aa13.68□□□□□ -0.22
PUF60-202ENST00000349157 GAGE10A6NGK3 116 aa13.68□□□□□ -0.22
PUF60-202ENST00000349157 IGHV3-30P01768 117 aa13.68□□□□□ -0.22
PUF60-202ENST00000349157 IGHV3-30-5P0DP03 117 aa13.68□□□□□ -0.22
PUF60-202ENST00000349157 SAMD5Q5TGI4 173 aa13.68□□□□□ -0.22
PUF60-202ENST00000349157 NDUFA12Q9UI09 145 aa13.68□□□□□ -0.22
PUF60-202ENST00000349157 CCL25O15444 150 aa13.67□□□□□ -0.22
PUF60-202ENST00000349157 RPL24P83731 157 aaKnown RBP13.67□□□□□ -0.22
PUF60-202ENST00000349157 RAB37Q96AX2 223 aa13.67□□□□□ -0.22
PUF60-202ENST00000349157 A0A0J9YXY3 114 aa13.67□□□□□ -0.22
PUF60-202ENST00000349157 IGHV3-64A0A075B6Q5 118 aa13.66□□□□□ -0.22
PUF60-202ENST00000349157 SPINK8P0C7L1 97 aa13.66□□□□□ -0.22
PUF60-202ENST00000349157 TRAV8-3A0A0A6YYJ7 113 aa13.65□□□□□ -0.22
PUF60-202ENST00000349157 TRAV13-1A0A0B4J241 112 aa13.65□□□□□ -0.22
PUF60-202ENST00000349157 NDUFA1O15239 70 aa13.65□□□□□ -0.22
PUF60-202ENST00000349157 GAGE6Q13070 117 aa13.65□□□□□ -0.22
PUF60-202ENST00000349157 K7EP13 123 aa13.64□□□□□ -0.23
PUF60-202ENST00000349157 K7EP34 96 aa13.64□□□□□ -0.23
PUF60-202ENST00000349157 OXLD1Q5BKU9 147 aa13.64□□□□□ -0.23
PUF60-202ENST00000349157 C10orf126Q8N4M7 172 aa13.64□□□□□ -0.23
PUF60-202ENST00000349157 SPANXDQ9BXN6 97 aa13.64□□□□□ -0.23
PUF60-202ENST00000349157 SPANXCQ9NY87 97 aa13.64□□□□□ -0.23
PUF60-202ENST00000349157 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.64□□□□□ -0.23
PUF60-202ENST00000349157 IGLL5B9A064 214 aa13.64□□□□□ -0.23
PUF60-202ENST00000349157 CIRBPQ14011 172 aaKnown RBP13.64□□□□□ -0.23
PUF60-202ENST00000349157 COPS9Q8WXC6 57 aa13.64□□□□□ -0.23
PUF60-202ENST00000349157 MRPL23Q16540 153 aaKnown RBP13.63□□□□□ -0.23
PUF60-202ENST00000349157 ATRQ13535 2644 aa13.63□□□□□ -0.23
PUF60-202ENST00000349157 HERV-K104P63124 156 aa13.62□□□□□ -0.23
PUF60-202ENST00000349157 COX6A2Q02221 97 aa13.62□□□□□ -0.23
PUF60-202ENST00000349157 IFITM1P13164 125 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms