RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 CRYBG3Q68DQ2 2970 aa12.96□□□□□ -0.34
APP-202ENST00000348990 PSMB8P28062 276 aa12.95□□□□□ -0.34
APP-202ENST00000348990 MRPL23Q16540 153 aaKnown RBP12.95□□□□□ -0.34
APP-202ENST00000348990 Q8N2B8 174 aa12.95□□□□□ -0.34
APP-202ENST00000348990 Q9HAA7 133 aa12.95□□□□□ -0.34
APP-202ENST00000348990 TOMM7Q9P0U1 55 aa12.95□□□□□ -0.34
APP-202ENST00000348990 CFHR3Q02985 330 aa12.95□□□□□ -0.34
APP-202ENST00000348990 DEFB112Q30KQ8 113 aa12.94□□□□□ -0.34
APP-202ENST00000348990 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.94□□□□□ -0.34
APP-202ENST00000348990 FAM240AA0A1B0GVK7 77 aa12.94□□□□□ -0.34
APP-202ENST00000348990 COX7A2LO14548 114 aa12.94□□□□□ -0.34
APP-202ENST00000348990 MAPK1IP1LQ8NDC0 245 aa12.94□□□□□ -0.34
APP-202ENST00000348990 JMJD1CQ15652 2540 aa12.93□□□□□ -0.34
APP-202ENST00000348990 NDUFA1O15239 70 aa12.93□□□□□ -0.34
APP-202ENST00000348990 PIK3CD-AS1Q5SR53 167 aa12.93□□□□□ -0.34
APP-202ENST00000348990 BRI3O95415 125 aa12.93□□□□□ -0.34
APP-202ENST00000348990 HIST2H2BDQ6DRA6 164 aa12.93□□□□□ -0.34
APP-202ENST00000348990 SLURP1P55000 103 aa12.92□□□□□ -0.34
APP-202ENST00000348990 UBE2E2Q96LR5 201 aa12.92□□□□□ -0.34
APP-202ENST00000348990 XCL2Q9UBD3 114 aa12.92□□□□□ -0.34
APP-202ENST00000348990 SONP18583 2426 aaKnown RBP12.91□□□□□ -0.34
APP-202ENST00000348990 TRGV1A0A0A0MS02 117 aa12.91□□□□□ -0.34
APP-202ENST00000348990 GNLYP22749 145 aa12.9□□□□□ -0.34
APP-202ENST00000348990 UCNP55089 124 aa12.9□□□□□ -0.34
APP-202ENST00000348990 HERVK_113P63121 156 aa12.9□□□□□ -0.34
APP-202ENST00000348990 C10orf105Q8TEF2 133 aa12.9□□□□□ -0.34
APP-202ENST00000348990 ACYP1P07311 99 aa12.9□□□□□ -0.34
APP-202ENST00000348990 DYNLRB2Q8TF09 96 aa12.9□□□□□ -0.34
APP-202ENST00000348990 DNAL4O96015 105 aa12.89□□□□□ -0.35
APP-202ENST00000348990 TIMM17BO60830 172 aa12.89□□□□□ -0.35
APP-202ENST00000348990 EDA2RQ9HAV5 297 aa12.89□□□□□ -0.35
APP-202ENST00000348990 TRBV7-7A0A0K0K1E9 115 aa12.89□□□□□ -0.35
APP-202ENST00000348990 SOSTDC1Q6X4U4 206 aa12.89□□□□□ -0.35
APP-202ENST00000348990 COPS9Q8WXC6 57 aa12.89□□□□□ -0.35
APP-202ENST00000348990 LINC00242Q5T6M2 205 aa12.88□□□□□ -0.35
APP-202ENST00000348990 LINC00643Q86TS7 51 aa12.88□□□□□ -0.35
APP-202ENST00000348990 SMCR5Q8TEV8 140 aa12.88□□□□□ -0.35
APP-202ENST00000348990 VPS13CQ709C8 3753 aa12.88□□□□□ -0.35
APP-202ENST00000348990 MYO18BQ8IUG5 2567 aa12.88□□□□□ -0.35
APP-202ENST00000348990 LINC00694P0DN24 101 aa12.88□□□□□ -0.35
APP-202ENST00000348990 NBL1P41271 181 aa12.88□□□□□ -0.35
APP-202ENST00000348990 C18orf65Q6ZTR6 163 aa12.87□□□□□ -0.35
APP-202ENST00000348990 TIRAPP58753 221 aa12.87□□□□□ -0.35
APP-202ENST00000348990 NRGNQ92686 78 aa12.87□□□□□ -0.35
APP-202ENST00000348990 LINC01600Q96MT4 127 aa12.87□□□□□ -0.35
APP-202ENST00000348990 RBMY1BA6NDE4 496 aaKnown RBP12.86□□□□□ -0.35
APP-202ENST00000348990 RBMY1EA6NEQ0 496 aaKnown RBP12.86□□□□□ -0.35
APP-202ENST00000348990 B4DSR2 109 aa12.86□□□□□ -0.35
APP-202ENST00000348990 RBMY1DP0C7P1 496 aaKnown RBP12.86□□□□□ -0.35
APP-202ENST00000348990 TMEM126AQ9H061 195 aa12.86□□□□□ -0.35
APP-202ENST00000348990 CRPP02741 224 aa12.86□□□□□ -0.35
APP-202ENST00000348990 KLK5Q9Y337 293 aaPredicted RBP12.86□□□□□ -0.35
APP-202ENST00000348990 DEFB121Q5J5C9 76 aa12.86□□□□□ -0.35
APP-202ENST00000348990 ZANQ9Y493 2812 aa12.85□□□□□ -0.35
APP-202ENST00000348990 UBE2L6O14933 153 aa12.85□□□□□ -0.35
APP-202ENST00000348990 PPDPFQ9H3Y8 114 aa12.85□□□□□ -0.35
APP-202ENST00000348990 LINC00158P58513 81 aa12.85□□□□□ -0.35
APP-202ENST00000348990 OR13C6PQ8NH95 151 aa12.85□□□□□ -0.35
APP-202ENST00000348990 FAM218AQ96MZ4 157 aa12.84□□□□□ -0.35
APP-202ENST00000348990 RPL36AP83881 106 aaKnown RBP12.84□□□□□ -0.35
APP-202ENST00000348990 RPL36ALQ969Q0 106 aaKnown RBP12.84□□□□□ -0.35
APP-202ENST00000348990 SMIM1B2RUZ4 78 aa12.83□□□□□ -0.36
APP-202ENST00000348990 IGKV3D-7A0A0C4DH55 119 aa12.83□□□□□ -0.36
APP-202ENST00000348990 INSP01308 110 aa12.83□□□□□ -0.36
APP-202ENST00000348990 C3orf22Q8N5N4 141 aa12.83□□□□□ -0.36
APP-202ENST00000348990 CELSR2Q9HCU4 2923 aa12.83□□□□□ -0.36
APP-202ENST00000348990 INAFM2P0DMQ5 153 aa12.83□□□□□ -0.36
APP-202ENST00000348990 DNAJC30Q96LL9 226 aa12.83□□□□□ -0.36
APP-202ENST00000348990 SDIM1Q6ZPB5 146 aa12.82□□□□□ -0.36
APP-202ENST00000348990 ATP5G1P05496 136 aa12.81□□□□□ -0.36
APP-202ENST00000348990 IMUPQ9GZP8 106 aa12.81□□□□□ -0.36
APP-202ENST00000348990 FN1P02751 2386 aaKnown RBP12.81□□□□□ -0.36
APP-202ENST00000348990 MIR7-3HGQ8N6C7 128 aa12.81□□□□□ -0.36
APP-202ENST00000348990 C14orf132Q9NPU4 83 aa12.81□□□□□ -0.36
APP-202ENST00000348990 TRACP01848 142 aa12.81□□□□□ -0.36
APP-202ENST00000348990 PFN2P35080 140 aa12.81□□□□□ -0.36
APP-202ENST00000348990 C11orf44Q8N8P7 122 aa12.81□□□□□ -0.36
APP-202ENST00000348990 C11orf68Q9H3H3 251 aaKnown RBP12.81□□□□□ -0.36
APP-202ENST00000348990 NAV2Q8IVL1 2488 aa12.81□□□□□ -0.36
APP-202ENST00000348990 MALP21145 153 aa12.8□□□□□ -0.36
APP-202ENST00000348990 CCDC168Q8NDH2 2452 aa12.8□□□□□ -0.36
APP-202ENST00000348990 ITPR1Q14643 2758 aa12.8□□□□□ -0.36
APP-202ENST00000348990 LOC107984640A0A0U1RRK4 108 aa12.8□□□□□ -0.36
APP-202ENST00000348990 HIST2H2BCQ6DN03 193 aa12.8□□□□□ -0.36
APP-202ENST00000348990 EPG5Q9HCE0 2579 aa12.79□□□□□ -0.36
APP-202ENST00000348990 TMEM89A2RUT3 159 aa12.79□□□□□ -0.36
APP-202ENST00000348990 UQCRQO14949 82 aa12.79□□□□□ -0.36
APP-202ENST00000348990 SND1-IT1Q9HBX3 110 aa12.79□□□□□ -0.36
APP-202ENST00000348990 VPREB3Q9UKI3 123 aa12.79□□□□□ -0.36
APP-202ENST00000348990 IGLV5-39A0A0G2JS06 123 aa12.78□□□□□ -0.36
APP-202ENST00000348990 MAP6D1Q9H9H5 199 aa12.78□□□□□ -0.36
APP-202ENST00000348990 ANKRD17O75179 2603 aaKnown RBP12.77□□□□□ -0.36
APP-202ENST00000348990 IGLV5-45A0A087WSX0 123 aa12.77□□□□□ -0.36
APP-202ENST00000348990 TRAV13-2A0A0B4J235 113 aa12.77□□□□□ -0.36
APP-202ENST00000348990 PAX4O43316 350 aa12.77□□□□□ -0.36
APP-202ENST00000348990 STHQ8IWL8 128 aa12.77□□□□□ -0.36
APP-202ENST00000348990 Q6ZTI0 123 aa12.77□□□□□ -0.37
APP-202ENST00000348990 ABCA12Q86UK0 2595 aa12.77□□□□□ -0.37
APP-202ENST00000348990 C11orf72Q8NBR9 251 aa12.76□□□□□ -0.37
APP-202ENST00000348990 PEMTQ9UBM1 199 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms