RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 HRCT1Q6UXD1 115 aa10.12□□□□□ -0.79
SYNE3-201ENST00000334258 C9orf85Q96MD7 179 aa10.12□□□□□ -0.79
SYNE3-201ENST00000334258 NIPBLQ6KC79 2804 aaeCLIP10.12□□□□□ -0.79
SYNE3-201ENST00000334258 TRGV11A0A075B6L2 103 aa10.12□□□□□ -0.79
SYNE3-201ENST00000334258 FAM236AA0A1B0GUQ0 79 aa10.12□□□□□ -0.79
SYNE3-201ENST00000334258 FAM236BA0A1B0GV22 79 aa10.12□□□□□ -0.79
SYNE3-201ENST00000334258 H3BT86 120 aa10.12□□□□□ -0.79
SYNE3-201ENST00000334258 A0A0U1RRA0 63 aa10.11□□□□□ -0.79
SYNE3-201ENST00000334258 H3BUX3 64 aa10.11□□□□□ -0.79
SYNE3-201ENST00000334258 ZNF843Q8N446 348 aa10.11□□□□□ -0.79
SYNE3-201ENST00000334258 SPANXA1Q9NS26 97 aa10.11□□□□□ -0.79
SYNE3-201ENST00000334258 IGHV1-58A0A0C4DH39 117 aa10.11□□□□□ -0.79
SYNE3-201ENST00000334258 SNRPD3P62318 126 aaKnown RBP10.11□□□□□ -0.79
SYNE3-201ENST00000334258 C4orf26Q17RF5 130 aa10.11□□□□□ -0.79
SYNE3-201ENST00000334258 C19orf54Q5BKX5 351 aa10.11□□□□□ -0.79
SYNE3-201ENST00000334258 KNCNA6PVL3 124 aa10.1□□□□□ -0.79
SYNE3-201ENST00000334258 MIAQ16674 131 aa10.1□□□□□ -0.79
SYNE3-201ENST00000334258 DCANP1Q8TF63 244 aa10.1□□□□□ -0.79
SYNE3-201ENST00000334258 LITAFQ99732 161 aa10.1□□□□□ -0.79
SYNE3-201ENST00000334258 DUX5Q96PT3 197 aa10.1□□□□□ -0.79
SYNE3-201ENST00000334258 PROK1P58294 105 aa10.09□□□□□ -0.79
SYNE3-201ENST00000334258 C2CD3Q4AC94 2353 aa10.08□□□□□ -0.8
SYNE3-201ENST00000334258 LST1O00453 97 aa10.08□□□□□ -0.8
SYNE3-201ENST00000334258 MRPS36P82909 103 aaKnown RBP10.08□□□□□ -0.8
SYNE3-201ENST00000334258 LRRC75A-AS1Q8N1F1 130 aa10.08□□□□□ -0.8
SYNE3-201ENST00000334258 ZNF625Q96I27 306 aaPredicted RBP10.08□□□□□ -0.8
SYNE3-201ENST00000334258 IGHV4-38-2P0DP08 117 aa10.08□□□□□ -0.8
SYNE3-201ENST00000334258 TMEM61Q8N0U2 210 aa10.08□□□□□ -0.8
SYNE3-201ENST00000334258 VSIG2Q96IQ7 327 aa10.08□□□□□ -0.8
SYNE3-201ENST00000334258 IGHG2P01859 326 aa10.08□□□□□ -0.8
SYNE3-201ENST00000334258 NACAE9PAV3 2078 aa10.07□□□□□ -0.8
SYNE3-201ENST00000334258 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.07□□□□□ -0.8
SYNE3-201ENST00000334258 IGKV2-29A2NJV5 120 aaPredicted RBP10.07□□□□□ -0.8
SYNE3-201ENST00000334258 SPANXDQ9BXN6 97 aa10.07□□□□□ -0.8
SYNE3-201ENST00000334258 SPANXCQ9NY87 97 aa10.07□□□□□ -0.8
SYNE3-201ENST00000334258 UNC79Q9P2D8 2635 aa10.07□□□□□ -0.8
SYNE3-201ENST00000334258 DGAT2L7PQ6IED9 249 aa10.06□□□□□ -0.8
SYNE3-201ENST00000334258 IGHV3-38A0A0C4DH36 116 aa10.06□□□□□ -0.8
SYNE3-201ENST00000334258 H3BUA1 57 aa10.06□□□□□ -0.8
SYNE3-201ENST00000334258 CIRBPQ14011 172 aaKnown RBP10.06□□□□□ -0.8
SYNE3-201ENST00000334258 KIR2DL5BQ8NHK3 375 aa10.05□□□□□ -0.8
SYNE3-201ENST00000334258 PYGO1Q9Y3Y4 419 aa10.05□□□□□ -0.8
SYNE3-201ENST00000334258 AVPP01185 164 aa10.05□□□□□ -0.8
SYNE3-201ENST00000334258 HIST2H2BDQ6DRA6 164 aa10.05□□□□□ -0.8
SYNE3-201ENST00000334258 C3orf22Q8N5N4 141 aa10.05□□□□□ -0.8
SYNE3-201ENST00000334258 Q9UF83 564 aa10.04□□□□□ -0.8
SYNE3-201ENST00000334258 FAM240AA0A1B0GVK7 77 aa10.04□□□□□ -0.8
SYNE3-201ENST00000334258 PRM2P04554 102 aa10.04□□□□□ -0.8
SYNE3-201ENST00000334258 LINC01600Q96MT4 127 aa10.04□□□□□ -0.8
SYNE3-201ENST00000334258 JMJD1CQ15652 2540 aa10.04□□□□□ -0.8
SYNE3-201ENST00000334258 K7EMT4 169 aa10.04□□□□□ -0.8
SYNE3-201ENST00000334258 TINCRA0A1B0GVN0 87 aa10.03□□□□□ -0.8
SYNE3-201ENST00000334258 CDKN2A-AS1Q9UH64 79 aa10.03□□□□□ -0.8
SYNE3-201ENST00000334258 GAGE2AQ6NT46 116 aa10.02□□□□□ -0.8
SYNE3-201ENST00000334258 SYNJ2BPP57105 145 aa10.02□□□□□ -0.81
SYNE3-201ENST00000334258 FAM104AQ969W3 186 aa10.02□□□□□ -0.81
SYNE3-201ENST00000334258 C10orf105Q8TEF2 133 aa10.01□□□□□ -0.81
SYNE3-201ENST00000334258 C1orf43Q9BWL3 253 aa10.01□□□□□ -0.81
SYNE3-201ENST00000334258 Q9H8V8 135 aa10.01□□□□□ -0.81
SYNE3-201ENST00000334258 C10orf99Q6UWK7 81 aa10.01□□□□□ -0.81
SYNE3-201ENST00000334258 DSCR8Q96T75 97 aa10.01□□□□□ -0.81
SYNE3-201ENST00000334258 LINC00467Q9BRT7 94 aa10.01□□□□□ -0.81
SYNE3-201ENST00000334258 A6NDX4 124 aa10□□□□□ -0.81
SYNE3-201ENST00000334258 K7EQG2 157 aa10□□□□□ -0.81
SYNE3-201ENST00000334258 IGLV1-40P01703 118 aa10□□□□□ -0.81
SYNE3-201ENST00000334258 PKIGQ9Y2B9 76 aa10□□□□□ -0.81
SYNE3-201ENST00000334258 UBE2D4Q9Y2X8 147 aa10□□□□□ -0.81
SYNE3-201ENST00000334258 TRBV7-7A0A0K0K1E9 115 aa10□□□□□ -0.81
SYNE3-201ENST00000334258 hADV29S1A0JD25 119 aa10□□□□□ -0.81
SYNE3-201ENST00000334258 J3QLI3 93 aa10□□□□□ -0.81
SYNE3-201ENST00000334258 A0A1B0GX51 115 aa9.99□□□□□ -0.81
SYNE3-201ENST00000334258 UQCRQO14949 82 aa9.99□□□□□ -0.81
SYNE3-201ENST00000334258 CYSTM1Q9H1C7 97 aa9.99□□□□□ -0.81
SYNE3-201ENST00000334258 ACYP1P07311 99 aa9.99□□□□□ -0.81
SYNE3-201ENST00000334258 DEFB121Q5J5C9 76 aa9.99□□□□□ -0.81
SYNE3-201ENST00000334258 Q6ZSN1 163 aa9.99□□□□□ -0.81
SYNE3-201ENST00000334258 LINC00308Q8TCZ7 52 aa9.99□□□□□ -0.81
SYNE3-201ENST00000334258 CHCHD7Q9BUK0 85 aa9.98□□□□□ -0.81
SYNE3-201ENST00000334258 OXTP01178 125 aa9.98□□□□□ -0.81
SYNE3-201ENST00000334258 COX7A2LO14548 114 aa9.97□□□□□ -0.81
SYNE3-201ENST00000334258 BAALC-AS2P0C853 105 aa9.97□□□□□ -0.81
SYNE3-201ENST00000334258 DAZ2Q13117 558 aaKnown RBP9.97□□□□□ -0.81
SYNE3-201ENST00000334258 DAZ4Q86SG3 579 aaKnown RBP9.97□□□□□ -0.81
SYNE3-201ENST00000334258 DAZ3Q9NR90 486 aaKnown RBP9.97□□□□□ -0.81
SYNE3-201ENST00000334258 TIMM17BO60830 172 aa9.97□□□□□ -0.81
SYNE3-201ENST00000334258 RBMY1A1P0DJD3 496 aaKnown RBP9.97□□□□□ -0.81
SYNE3-201ENST00000334258 RBMY1CP0DJD4 496 aa9.97□□□□□ -0.81
SYNE3-201ENST00000334258 RBMY1FQ15415 496 aaKnown RBP9.97□□□□□ -0.81
SYNE3-201ENST00000334258 LINC00526Q96FQ7 95 aa9.97□□□□□ -0.81
SYNE3-201ENST00000334258 FN1P02751 2386 aaKnown RBP9.96□□□□□ -0.81
SYNE3-201ENST00000334258 TRAV13-1A0A0B4J241 112 aa9.96□□□□□ -0.81
SYNE3-201ENST00000334258 NDUFA1O15239 70 aa9.96□□□□□ -0.81
SYNE3-201ENST00000334258 DEFB131AP59861 70 aa9.96□□□□□ -0.81
SYNE3-201ENST00000334258 PRIMA1Q86XR5 153 aa9.96□□□□□ -0.81
SYNE3-201ENST00000334258 LINC00643Q86TS7 51 aa9.96□□□□□ -0.82
SYNE3-201ENST00000334258 RNF152Q8N8N0 203 aa9.96□□□□□ -0.82
SYNE3-201ENST00000334258 Q8N2B8 174 aa9.95□□□□□ -0.82
SYNE3-201ENST00000334258 F8WDY8 70 aa9.95□□□□□ -0.82
SYNE3-201ENST00000334258 MSMBP08118 114 aa9.95□□□□□ -0.82
SYNE3-201ENST00000334258 COX6A2Q02221 97 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms