RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 C9orf85Q96MD7 179 aa9.56□□□□□ -0.88
VSTM4-202ENST00000332853 LAMA3Q16787 3333 aa9.56□□□□□ -0.88
VSTM4-202ENST00000332853 ETDCA0A1B0GVM5 59 aa9.55□□□□□ -0.88
VSTM4-202ENST00000332853 TEN1Q86WV5 123 aa9.55□□□□□ -0.88
VSTM4-202ENST00000332853 HILS1P60008 231 aa9.55□□□□□ -0.88
VSTM4-202ENST00000332853 LYRM9A8MSI8 78 aa9.55□□□□□ -0.88
VSTM4-202ENST00000332853 H0YGX0 51 aa9.55□□□□□ -0.88
VSTM4-202ENST00000332853 TIRAPP58753 221 aa9.55□□□□□ -0.88
VSTM4-202ENST00000332853 TRBV6-8A0A0A6YYG3 113 aa9.54□□□□□ -0.88
VSTM4-202ENST00000332853 CHCHD10Q8WYQ3 142 aaPredicted RBP9.54□□□□□ -0.88
VSTM4-202ENST00000332853 FOXI1Q12951 378 aa9.54□□□□□ -0.88
VSTM4-202ENST00000332853 RBMY1FQ15415 496 aaKnown RBP9.54□□□□□ -0.88
VSTM4-202ENST00000332853 IGHV4-28A0A0C4DH34 117 aa9.53□□□□□ -0.88
VSTM4-202ENST00000332853 SMIM9A6NGZ8 99 aa9.53□□□□□ -0.88
VSTM4-202ENST00000332853 PIK3CD-AS1Q5SR53 167 aa9.53□□□□□ -0.88
VSTM4-202ENST00000332853 RANBP2P49792 3224 aaKnown RBP9.53□□□□□ -0.88
VSTM4-202ENST00000332853 TRBV10-2A0A0K0K1G8 114 aa9.53□□□□□ -0.88
VSTM4-202ENST00000332853 C2orf91Q6ZV80 131 aa9.53□□□□□ -0.88
VSTM4-202ENST00000332853 TRBV6-5A0A0K0K1A5 114 aa9.53□□□□□ -0.88
VSTM4-202ENST00000332853 hADV29S1A0JD25 119 aa9.52□□□□□ -0.88
VSTM4-202ENST00000332853 CXCL5P42830 114 aa9.52□□□□□ -0.88
VSTM4-202ENST00000332853 PTPRBP23467 1997 aa9.52□□□□□ -0.88
VSTM4-202ENST00000332853 IGKV3D-7A0A0C4DH55 119 aa9.52□□□□□ -0.89
VSTM4-202ENST00000332853 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.52□□□□□ -0.89
VSTM4-202ENST00000332853 ABCA2Q9BZC7 2435 aa9.52□□□□□ -0.89
VSTM4-202ENST00000332853 POLR2KP53803 58 aaKnown RBP9.52□□□□□ -0.89
VSTM4-202ENST00000332853 CNFNQ9BYD5 112 aa9.52□□□□□ -0.89
VSTM4-202ENST00000332853 TRBV6-4A0A1B0GX49 114 aa9.51□□□□□ -0.89
VSTM4-202ENST00000332853 CRIP2P52943 208 aaPredicted RBP9.51□□□□□ -0.89
VSTM4-202ENST00000332853 DEFB131BA0A096LNP1 70 aa9.51□□□□□ -0.89
VSTM4-202ENST00000332853 TM2D2Q9BX73 214 aa9.51□□□□□ -0.89
VSTM4-202ENST00000332853 ODF3L2Q3SX64 289 aa9.51□□□□□ -0.89
VSTM4-202ENST00000332853 UBE2D4Q9Y2X8 147 aa9.51□□□□□ -0.89
VSTM4-202ENST00000332853 TRACP01848 142 aa9.5□□□□□ -0.89
VSTM4-202ENST00000332853 A0A0B4J2C4 111 aa9.49□□□□□ -0.89
VSTM4-202ENST00000332853 G3V4G9 280 aa9.49□□□□□ -0.89
VSTM4-202ENST00000332853 PRB2P02812 416 aaPredicted RBP9.49□□□□□ -0.89
VSTM4-202ENST00000332853 LINC00526Q96FQ7 95 aa9.49□□□□□ -0.89
VSTM4-202ENST00000332853 MIFP14174 115 aa9.48□□□□□ -0.89
VSTM4-202ENST00000332853 H7C423 109 aa9.48□□□□□ -0.89
VSTM4-202ENST00000332853 LINC00308Q8TCZ7 52 aa9.48□□□□□ -0.89
VSTM4-202ENST00000332853 DIRC1Q969H9 104 aa9.48□□□□□ -0.89
VSTM4-202ENST00000332853 OXLD1Q5BKU9 147 aa9.48□□□□□ -0.89
VSTM4-202ENST00000332853 NDUFA7O95182 113 aa9.47□□□□□ -0.89
VSTM4-202ENST00000332853 PYGO1Q9Y3Y4 419 aa9.47□□□□□ -0.89
VSTM4-202ENST00000332853 SPTBN4Q9H254 2564 aa9.47□□□□□ -0.89
VSTM4-202ENST00000332853 IGKV2-24A0A0C4DH68 120 aa9.47□□□□□ -0.89
VSTM4-202ENST00000332853 SPANXCQ9NY87 97 aa9.47□□□□□ -0.89
VSTM4-202ENST00000332853 RBX1P62877 108 aa9.46□□□□□ -0.89
VSTM4-202ENST00000332853 C14orf132Q9NPU4 83 aa9.46□□□□□ -0.89
VSTM4-202ENST00000332853 SPANXB1Q9NS25 103 aaPredicted RBP9.46□□□□□ -0.89
VSTM4-202ENST00000332853 SLPIP03973 132 aa9.46□□□□□ -0.9
VSTM4-202ENST00000332853 CLUHP3Q96NS8 147 aa9.46□□□□□ -0.9
VSTM4-202ENST00000332853 COL27A1Q8IZC6 1860 aaPredicted RBP9.45□□□□□ -0.9
VSTM4-202ENST00000332853 TRIAP1O43715 76 aa9.45□□□□□ -0.9
VSTM4-202ENST00000332853 ACYP1P07311 99 aa9.45□□□□□ -0.9
VSTM4-202ENST00000332853 TEX49A0A1B0GTD5 131 aa9.45□□□□□ -0.9
VSTM4-202ENST00000332853 SHISA2Q6UWI4 295 aa9.45□□□□□ -0.9
VSTM4-202ENST00000332853 XAGE1AQ9HD64 81 aa9.45□□□□□ -0.9
VSTM4-202ENST00000332853 CHD9Q3L8U1 2897 aa9.45□□□□□ -0.9
VSTM4-202ENST00000332853 CHD8Q9HCK8 2581 aa9.45□□□□□ -0.9
VSTM4-202ENST00000332853 IGIPA6NJ69 53 aa9.44□□□□□ -0.9
VSTM4-202ENST00000332853 UBE2D1P51668 147 aa9.44□□□□□ -0.9
VSTM4-202ENST00000332853 H3BT86 120 aa9.44□□□□□ -0.9
VSTM4-202ENST00000332853 NDUFS5O43920 106 aa9.43□□□□□ -0.9
VSTM4-202ENST00000332853 KLK5Q9Y337 293 aaPredicted RBP9.43□□□□□ -0.9
VSTM4-202ENST00000332853 UFSP1Q6NVU6 142 aa9.42□□□□□ -0.9
VSTM4-202ENST00000332853 UBE2AP49459 152 aa9.42□□□□□ -0.9
VSTM4-202ENST00000332853 C1orf158Q8N1D5 194 aa9.42□□□□□ -0.9
VSTM4-202ENST00000332853 PRRC2CQ9Y520 2896 aaKnown RBP9.42□□□□□ -0.9
VSTM4-202ENST00000332853 IGHV4-30-4P0DP06 118 aa9.42□□□□□ -0.9
VSTM4-202ENST00000332853 FUSP35637 526 aaKnown RBP eCLIP9.42□□□□□ -0.9
VSTM4-202ENST00000332853 UBE2D3P61077 147 aa9.42□□□□□ -0.9
VSTM4-202ENST00000332853 UBE2D2P62837 147 aa9.42□□□□□ -0.9
VSTM4-202ENST00000332853 LINC00959A0A1B0GUT2 108 aa9.42□□□□□ -0.9
VSTM4-202ENST00000332853 COX7BP24311 80 aa9.42□□□□□ -0.9
VSTM4-202ENST00000332853 Q6ZSN1 163 aa9.42□□□□□ -0.9
VSTM4-202ENST00000332853 A0A096LNJ9 63 aa9.41□□□□□ -0.9
VSTM4-202ENST00000332853 RETNQ9HD89 108 aa9.41□□□□□ -0.9
VSTM4-202ENST00000332853 FAM236AA0A1B0GUQ0 79 aa9.41□□□□□ -0.9
VSTM4-202ENST00000332853 FAM236BA0A1B0GV22 79 aa9.41□□□□□ -0.9
VSTM4-202ENST00000332853 KPRPQ5T749 579 aaPredicted RBP9.41□□□□□ -0.9
VSTM4-202ENST00000332853 SPATA25Q9BR10 227 aa9.41□□□□□ -0.9
VSTM4-202ENST00000332853 C2CD3Q4AC94 2353 aa9.41□□□□□ -0.9
VSTM4-202ENST00000332853 RBM3P98179 157 aaKnown RBP9.41□□□□□ -0.9
VSTM4-202ENST00000332853 IBA57-AS1B1ANH7 110 aa9.41□□□□□ -0.9
VSTM4-202ENST00000332853 B5MCH6 92 aa9.41□□□□□ -0.9
VSTM4-202ENST00000332853 COX8CQ7Z4L0 72 aa9.41□□□□□ -0.9
VSTM4-202ENST00000332853 TMEM256-PLSCR3K7ERE1 68 aa9.41□□□□□ -0.9
VSTM4-202ENST00000332853 IGLV1-51P01701 117 aa9.4□□□□□ -0.9
VSTM4-202ENST00000332853 POM121L12Q8N7R1 296 aa9.4□□□□□ -0.9
VSTM4-202ENST00000332853 MYO9AB2RTY4 2548 aa9.4□□□□□ -0.91
VSTM4-202ENST00000332853 IGLV4-69A0A075B6H9 119 aa9.4□□□□□ -0.91
VSTM4-202ENST00000332853 NANOS2P60321 138 aaKnown RBP9.4□□□□□ -0.91
VSTM4-202ENST00000332853 CDC42SE2Q9NRR3 84 aa9.39□□□□□ -0.91
VSTM4-202ENST00000332853 LAMA2P24043 3122 aaKnown RBP9.39□□□□□ -0.91
VSTM4-202ENST00000332853 BRI3O95415 125 aa9.39□□□□□ -0.91
VSTM4-202ENST00000332853 LINC00694P0DN24 101 aa9.39□□□□□ -0.91
VSTM4-202ENST00000332853 COX6A2Q02221 97 aa9.39□□□□□ -0.91
VSTM4-202ENST00000332853 JMJD7-PLA2G4BH0Y9G9 81 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms