RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 C14orf132Q9NPU4 83 aa11.06□□□□□ -0.64
RGPD6-202ENST00000330331 NDUFA1O15239 70 aa11.05□□□□□ -0.64
RGPD6-202ENST00000330331 PRIMA1Q86XR5 153 aa11.05□□□□□ -0.64
RGPD6-202ENST00000330331 DNAL4O96015 105 aa11.05□□□□□ -0.64
RGPD6-202ENST00000330331 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.05□□□□□ -0.64
RGPD6-202ENST00000330331 NDUFA4O00483 81 aa11.04□□□□□ -0.64
RGPD6-202ENST00000330331 HRNRQ86YZ3 2850 aaPredicted RBP11.04□□□□□ -0.64
RGPD6-202ENST00000330331 SYNJ2BPP57105 145 aa11.04□□□□□ -0.64
RGPD6-202ENST00000330331 ASH1LQ9NR48 2969 aaKnown RBP11.04□□□□□ -0.64
RGPD6-202ENST00000330331 HTN1P15515 57 aa11.04□□□□□ -0.64
RGPD6-202ENST00000330331 GNLYP22749 145 aa11.04□□□□□ -0.64
RGPD6-202ENST00000330331 LINC01561Q8N1V8 128 aa11.04□□□□□ -0.64
RGPD6-202ENST00000330331 LINC00846Q9NV44 126 aa11.04□□□□□ -0.64
RGPD6-202ENST00000330331 EPG5Q9HCE0 2579 aa11.03□□□□□ -0.64
RGPD6-202ENST00000330331 USP17L23D6RBM5 183 aa11.03□□□□□ -0.64
RGPD6-202ENST00000330331 KNCNA6PVL3 124 aa11.03□□□□□ -0.64
RGPD6-202ENST00000330331 SAA4P35542 130 aa11.03□□□□□ -0.64
RGPD6-202ENST00000330331 COX6A2Q02221 97 aa11.03□□□□□ -0.64
RGPD6-202ENST00000330331 UBE2D4Q9Y2X8 147 aa11.03□□□□□ -0.64
RGPD6-202ENST00000330331 ZFHX3Q15911 3703 aa11.02□□□□□ -0.64
RGPD6-202ENST00000330331 IGHV3-38A0A0C4DH36 116 aa11.02□□□□□ -0.65
RGPD6-202ENST00000330331 SPINK13Q1W4C9 94 aa11.02□□□□□ -0.65
RGPD6-202ENST00000330331 FAM222AQ5U5X8 452 aa11.02□□□□□ -0.65
RGPD6-202ENST00000330331 FLNCQ14315 2725 aa11.02□□□□□ -0.65
RGPD6-202ENST00000330331 PIK3CD-AS1Q5SR53 167 aa11.01□□□□□ -0.65
RGPD6-202ENST00000330331 C5orf56Q8N8D9 126 aa11.01□□□□□ -0.65
RGPD6-202ENST00000330331 IGHV1OR15-1A0A075B7D0 117 aa11.01□□□□□ -0.65
RGPD6-202ENST00000330331 LINC00467Q9BRT7 94 aa11.01□□□□□ -0.65
RGPD6-202ENST00000330331 CHCHD7Q9BUK0 85 aa11.01□□□□□ -0.65
RGPD6-202ENST00000330331 FAM223BA6NKX1 122 aa11□□□□□ -0.65
RGPD6-202ENST00000330331 FHL2Q14192 279 aa11□□□□□ -0.65
RGPD6-202ENST00000330331 FAM223AQ8IWN6 122 aa11□□□□□ -0.65
RGPD6-202ENST00000330331 COL12A1Q99715 3063 aa10.99□□□□□ -0.65
RGPD6-202ENST00000330331 Q6JHZ5 121 aa10.99□□□□□ -0.65
RGPD6-202ENST00000330331 SIRPDQ9H106 197 aa10.99□□□□□ -0.65
RGPD6-202ENST00000330331 PRM2P04554 102 aa10.98□□□□□ -0.65
RGPD6-202ENST00000330331 HILS1P60008 231 aa10.98□□□□□ -0.65
RGPD6-202ENST00000330331 MYO18BQ8IUG5 2567 aa10.97□□□□□ -0.65
RGPD6-202ENST00000330331 A0A087WYN8 130 aa10.97□□□□□ -0.65
RGPD6-202ENST00000330331 Q6ZSN1 163 aa10.97□□□□□ -0.65
RGPD6-202ENST00000330331 SORL1Q92673 2214 aa10.96□□□□□ -0.65
RGPD6-202ENST00000330331 WFDC9Q8NEX5 89 aa10.96□□□□□ -0.65
RGPD6-202ENST00000330331 HIST2H2BCQ6DN03 193 aa10.96□□□□□ -0.66
RGPD6-202ENST00000330331 HIST2H2BDQ6DRA6 164 aa10.96□□□□□ -0.66
RGPD6-202ENST00000330331 SPTAN1Q13813 2472 aaKnown RBP10.96□□□□□ -0.66
RGPD6-202ENST00000330331 NCR3O14931 201 aa10.95□□□□□ -0.66
RGPD6-202ENST00000330331 DGAT2L7PQ6IED9 249 aa10.95□□□□□ -0.66
RGPD6-202ENST00000330331 BBC3Q96PG8 261 aaPredicted RBP10.94□□□□□ -0.66
RGPD6-202ENST00000330331 USP9XQ93008 2570 aaPredicted RBP10.94□□□□□ -0.66
RGPD6-202ENST00000330331 C19orf54Q5BKX5 351 aa10.94□□□□□ -0.66
RGPD6-202ENST00000330331 ZNF462Q96JM2 2506 aa10.94□□□□□ -0.66
RGPD6-202ENST00000330331 PRB1P04280 392 aa10.94□□□□□ -0.66
RGPD6-202ENST00000330331 TRAV23DV6A0A075B6W5 121 aa10.93□□□□□ -0.66
RGPD6-202ENST00000330331 GHRHP01286 108 aa10.93□□□□□ -0.66
RGPD6-202ENST00000330331 MRAPQ8TCY5 172 aa10.93□□□□□ -0.66
RGPD6-202ENST00000330331 IGHV3OR16-12A0A075B7B8 117 aa10.92□□□□□ -0.66
RGPD6-202ENST00000330331 IGLV5-45A0A087WSX0 123 aa10.92□□□□□ -0.66
RGPD6-202ENST00000330331 IGLV5-39A0A0G2JS06 123 aa10.92□□□□□ -0.66
RGPD6-202ENST00000330331 C19orf84I3L1E1 186 aa10.92□□□□□ -0.66
RGPD6-202ENST00000330331 SLPIP03973 132 aa10.92□□□□□ -0.66
RGPD6-202ENST00000330331 PFN2P35080 140 aa10.92□□□□□ -0.66
RGPD6-202ENST00000330331 LINC00242Q5T6M2 205 aa10.92□□□□□ -0.66
RGPD6-202ENST00000330331 COPS9Q8WXC6 57 aa10.92□□□□□ -0.66
RGPD6-202ENST00000330331 AKAP6Q13023 2319 aa10.92□□□□□ -0.66
RGPD6-202ENST00000330331 RPL28P46779 137 aaKnown RBP10.92□□□□□ -0.66
RGPD6-202ENST00000330331 LINC00337Q8N6G1 96 aa10.92□□□□□ -0.66
RGPD6-202ENST00000330331 DOPEY1Q5JWR5 2465 aa10.91□□□□□ -0.66
RGPD6-202ENST00000330331 SMIM1B2RUZ4 78 aa10.91□□□□□ -0.66
RGPD6-202ENST00000330331 CRPP02741 224 aa10.91□□□□□ -0.66
RGPD6-202ENST00000330331 MOB4Q9Y3A3 225 aa10.91□□□□□ -0.66
RGPD6-202ENST00000330331 DOPEY2Q9Y3R5 2298 aa10.91□□□□□ -0.66
RGPD6-202ENST00000330331 TMEM243Q9BU79 118 aa10.91□□□□□ -0.66
RGPD6-202ENST00000330331 UTP20O75691 2785 aaKnown RBP10.91□□□□□ -0.66
RGPD6-202ENST00000330331 ZNF415Q09FC8 603 aa10.9□□□□□ -0.66
RGPD6-202ENST00000330331 LY6EQ16553 131 aa10.9□□□□□ -0.66
RGPD6-202ENST00000330331 LINC00336Q6ZUF6 198 aa10.9□□□□□ -0.66
RGPD6-202ENST00000330331 C20orf197Q8N268 126 aa10.9□□□□□ -0.66
RGPD6-202ENST00000330331 RBMY1A1P0DJD3 496 aaKnown RBP10.9□□□□□ -0.66
RGPD6-202ENST00000330331 RBMY1CP0DJD4 496 aa10.9□□□□□ -0.66
RGPD6-202ENST00000330331 RBMY1FQ15415 496 aaKnown RBP10.9□□□□□ -0.66
RGPD6-202ENST00000330331 PIMREGQ9BSJ6 248 aa10.9□□□□□ -0.66
RGPD6-202ENST00000330331 LECT2O14960 151 aa10.9□□□□□ -0.67
RGPD6-202ENST00000330331 SMIM11BQ8TCY0 68 aa10.9□□□□□ -0.67
RGPD6-202ENST00000330331 A0A1W2PPR1 153 aa10.89□□□□□ -0.67
RGPD6-202ENST00000330331 TRAV13-2A0A0B4J235 113 aa10.89□□□□□ -0.67
RGPD6-202ENST00000330331 FAM19A1Q7Z5A9 133 aa10.88□□□□□ -0.67
RGPD6-202ENST00000330331 IGKV2-28A0A075B6P5 120 aa10.88□□□□□ -0.67
RGPD6-202ENST00000330331 IGKV2D-28P01615 120 aa10.88□□□□□ -0.67
RGPD6-202ENST00000330331 C1orf43Q9BWL3 253 aa10.88□□□□□ -0.67
RGPD6-202ENST00000330331 ZNF843Q8N446 348 aa10.87□□□□□ -0.67
RGPD6-202ENST00000330331 USMG5Q96IX5 58 aa10.87□□□□□ -0.67
RGPD6-202ENST00000330331 UBR5O95071 2799 aaPredicted RBP10.87□□□□□ -0.67
RGPD6-202ENST00000330331 RBMY1BA6NDE4 496 aaKnown RBP10.87□□□□□ -0.67
RGPD6-202ENST00000330331 RBMY1EA6NEQ0 496 aaKnown RBP10.87□□□□□ -0.67
RGPD6-202ENST00000330331 RBMY1DP0C7P1 496 aaKnown RBP10.87□□□□□ -0.67
RGPD6-202ENST00000330331 C11orf71Q6IPW1 123 aa10.87□□□□□ -0.67
RGPD6-202ENST00000330331 FAM236DA0A1B0GTK5 79 aa10.86□□□□□ -0.67
RGPD6-202ENST00000330331 NDUFC2O95298 119 aa10.86□□□□□ -0.67
RGPD6-202ENST00000330331 FAM236CP0DP71 79 aa10.86□□□□□ -0.67
RGPD6-202ENST00000330331 SNRPD3P62318 126 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms