RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 M0QY20 66 aa11.1□□□□□ -0.63
SCN3B-201ENST00000299333 C9orf85Q96MD7 179 aa11.09□□□□□ -0.63
SCN3B-201ENST00000299333 PROK1P58294 105 aa11.09□□□□□ -0.63
SCN3B-201ENST00000299333 OBSL1O75147 1896 aa11.09□□□□□ -0.63
SCN3B-201ENST00000299333 Q6ZPA2 131 aa11.08□□□□□ -0.64
SCN3B-201ENST00000299333 SMIM11BQ8TCY0 68 aa11.08□□□□□ -0.64
SCN3B-201ENST00000299333 A0A087WZ39 114 aa11.08□□□□□ -0.64
SCN3B-201ENST00000299333 ANAPC1Q9H1A4 1944 aa11.08□□□□□ -0.64
SCN3B-201ENST00000299333 DNAJC9-AS1A6NH13 148 aa11.08□□□□□ -0.64
SCN3B-201ENST00000299333 LINC01548A6NM66 108 aa11.08□□□□□ -0.64
SCN3B-201ENST00000299333 PCNX1Q96RV3 2341 aa11.07□□□□□ -0.64
SCN3B-201ENST00000299333 IGKV2-28A0A075B6P5 120 aa11.07□□□□□ -0.64
SCN3B-201ENST00000299333 IGKV2D-28P01615 120 aa11.07□□□□□ -0.64
SCN3B-201ENST00000299333 TMEM89A2RUT3 159 aa11.06□□□□□ -0.64
SCN3B-201ENST00000299333 ODF3Q96PU9 254 aa11.06□□□□□ -0.64
SCN3B-201ENST00000299333 DEFB113Q30KQ7 82 aa11.06□□□□□ -0.64
SCN3B-201ENST00000299333 MYCNOSP40205 109 aa11.05□□□□□ -0.64
SCN3B-201ENST00000299333 MSMPQ1L6U9 139 aa11.05□□□□□ -0.64
SCN3B-201ENST00000299333 C1orf229Q6ZS94 237 aaPredicted RBP11.05□□□□□ -0.64
SCN3B-201ENST00000299333 PLA2G2CQ5R387 149 aa11.05□□□□□ -0.64
SCN3B-201ENST00000299333 NUP210Q8TEM1 1887 aaPredicted RBP11.04□□□□□ -0.64
SCN3B-201ENST00000299333 SPINK6Q6UWN8 80 aa11.04□□□□□ -0.64
SCN3B-201ENST00000299333 TRBV7-7A0A0K0K1E9 115 aa11.04□□□□□ -0.64
SCN3B-201ENST00000299333 NRACQ8N912 160 aa11.04□□□□□ -0.64
SCN3B-201ENST00000299333 KIAA1671Q9BY89 1806 aa11.04□□□□□ -0.64
SCN3B-201ENST00000299333 TRBV6-8A0A0A6YYG3 113 aa11.03□□□□□ -0.64
SCN3B-201ENST00000299333 LINC00208Q96KT6 92 aa11.03□□□□□ -0.64
SCN3B-201ENST00000299333 A6NDX4 124 aa11.02□□□□□ -0.64
SCN3B-201ENST00000299333 TSHBP01222 138 aa11.02□□□□□ -0.64
SCN3B-201ENST00000299333 PYGO1Q9Y3Y4 419 aa11.02□□□□□ -0.64
SCN3B-201ENST00000299333 SMAD5-AS1Q9Y6J3 95 aa11.02□□□□□ -0.64
SCN3B-201ENST00000299333 PLXNB3Q9ULL4 1909 aa11.02□□□□□ -0.65
SCN3B-201ENST00000299333 IGLV2-11P01706 119 aa11.02□□□□□ -0.65
SCN3B-201ENST00000299333 K7EQG2 157 aa11.01□□□□□ -0.65
SCN3B-201ENST00000299333 GAS8-AS1O95177 125 aa11.01□□□□□ -0.65
SCN3B-201ENST00000299333 C14orf177Q52M58 125 aa11.01□□□□□ -0.65
SCN3B-201ENST00000299333 CRIP2P52943 208 aaPredicted RBP11□□□□□ -0.65
SCN3B-201ENST00000299333 CXCL6P80162 114 aa11□□□□□ -0.65
SCN3B-201ENST00000299333 KIR2DL5BQ8NHK3 375 aa11□□□□□ -0.65
SCN3B-201ENST00000299333 ESRGQ1W209 222 aa11□□□□□ -0.65
SCN3B-201ENST00000299333 RIF1Q5UIP0 2472 aaKnown RBP11□□□□□ -0.65
SCN3B-201ENST00000299333 GPR179Q6PRD1 2367 aa11□□□□□ -0.65
SCN3B-201ENST00000299333 IGFL2Q6UWQ7 119 aa11□□□□□ -0.65
SCN3B-201ENST00000299333 C11orf45Q8TAV5 145 aa10.99□□□□□ -0.65
SCN3B-201ENST00000299333 CRYGAP11844 174 aa10.99□□□□□ -0.65
SCN3B-201ENST00000299333 J3QKU1 62 aa10.98□□□□□ -0.65
SCN3B-201ENST00000299333 SYCNQ0VAF6 134 aa10.98□□□□□ -0.65
SCN3B-201ENST00000299333 EIF4EBP1Q13541 118 aaPredicted RBP10.98□□□□□ -0.65
SCN3B-201ENST00000299333 WNK1Q9H4A3 2382 aa10.98□□□□□ -0.65
SCN3B-201ENST00000299333 SPAG11AQ6PDA7 123 aa10.98□□□□□ -0.65
SCN3B-201ENST00000299333 Q8N6K4 173 aa10.98□□□□□ -0.65
SCN3B-201ENST00000299333 UBE2D4Q9Y2X8 147 aa10.98□□□□□ -0.65
SCN3B-201ENST00000299333 DHRS4-AS1Q9P1J3 65 aa10.97□□□□□ -0.65
SCN3B-201ENST00000299333 LY6LH3BQJ8 138 aa10.97□□□□□ -0.65
SCN3B-201ENST00000299333 ODF3BA8MYP8 253 aa10.97□□□□□ -0.65
SCN3B-201ENST00000299333 M0R378 163 aa10.96□□□□□ -0.65
SCN3B-201ENST00000299333 NTM-AS1Q6ZSK4 140 aa10.96□□□□□ -0.65
SCN3B-201ENST00000299333 LINC00310P59036 64 aa10.96□□□□□ -0.65
SCN3B-201ENST00000299333 ADORA2A-AS1P86434 159 aa10.96□□□□□ -0.65
SCN3B-201ENST00000299333 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.96□□□□□ -0.66
SCN3B-201ENST00000299333 RNASE3P12724 160 aaKnown RBP10.96□□□□□ -0.66
SCN3B-201ENST00000299333 CRIP3Q6Q6R5 217 aa10.96□□□□□ -0.66
SCN3B-201ENST00000299333 TRBV6-4A0A1B0GX49 114 aa10.95□□□□□ -0.66
SCN3B-201ENST00000299333 RPL37AP8A6NKH3 93 aa10.95□□□□□ -0.66
SCN3B-201ENST00000299333 LINC00574Q9H8X3 128 aa10.95□□□□□ -0.66
SCN3B-201ENST00000299333 C11orf21Q9P2W6 132 aa10.95□□□□□ -0.66
SCN3B-201ENST00000299333 ZNF73O43830 326 aaPredicted RBP10.95□□□□□ -0.66
SCN3B-201ENST00000299333 MDFIQ99750 246 aa10.95□□□□□ -0.66
SCN3B-201ENST00000299333 UBE2D1P51668 147 aa10.95□□□□□ -0.66
SCN3B-201ENST00000299333 UBE2D2P62837 147 aa10.95□□□□□ -0.66
SCN3B-201ENST00000299333 PIP4P1Q86T03 277 aa10.95□□□□□ -0.66
SCN3B-201ENST00000299333 Q6ZSV7 163 aa10.94□□□□□ -0.66
SCN3B-201ENST00000299333 DEFB114Q30KQ6 69 aa10.94□□□□□ -0.66
SCN3B-201ENST00000299333 PRR9Q5T870 116 aa10.94□□□□□ -0.66
SCN3B-201ENST00000299333 COL4A3Q01955 1670 aa10.94□□□□□ -0.66
SCN3B-201ENST00000299333 CD164L2Q6UWJ8 174 aa10.93□□□□□ -0.66
SCN3B-201ENST00000299333 FREM1Q5H8C1 2179 aa10.93□□□□□ -0.66
SCN3B-201ENST00000299333 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.93□□□□□ -0.66
SCN3B-201ENST00000299333 SPINT4Q6UDR6 99 aa10.93□□□□□ -0.66
SCN3B-201ENST00000299333 Q8N3U1 123 aa10.93□□□□□ -0.66
SCN3B-201ENST00000299333 POLR2KP53803 58 aaKnown RBP10.92□□□□□ -0.66
SCN3B-201ENST00000299333 LINC00959A0A1B0GUT2 108 aa10.92□□□□□ -0.66
SCN3B-201ENST00000299333 WISP2O76076 250 aa10.92□□□□□ -0.66
SCN3B-201ENST00000299333 DENND4CQ5VZ89 1909 aa10.92□□□□□ -0.66
SCN3B-201ENST00000299333 LOC100131303A0A0U1RQF7 123 aa10.92□□□□□ -0.66
SCN3B-201ENST00000299333 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.92□□□□□ -0.66
SCN3B-201ENST00000299333 TMEM254Q8TBM7 123 aa10.92□□□□□ -0.66
SCN3B-201ENST00000299333 BBC3Q96PG8 261 aaPredicted RBP10.92□□□□□ -0.66
SCN3B-201ENST00000299333 PCOTHQ58A44 107 aa10.91□□□□□ -0.66
SCN3B-201ENST00000299333 IGF2-ASQ6U949 168 aa10.91□□□□□ -0.66
SCN3B-201ENST00000299333 LIMD2Q9BT23 127 aa10.91□□□□□ -0.66
SCN3B-201ENST00000299333 DEFB131BA0A096LNP1 70 aa10.91□□□□□ -0.66
SCN3B-201ENST00000299333 PLAC8L1A1L4L8 177 aa10.91□□□□□ -0.66
SCN3B-201ENST00000299333 URB1-AS1Q96HZ7 61 aa10.91□□□□□ -0.66
SCN3B-201ENST00000299333 IGLV9-49A0A0B4J1Y8 123 aa10.9□□□□□ -0.66
SCN3B-201ENST00000299333 A0A087WYN8 130 aa10.9□□□□□ -0.67
SCN3B-201ENST00000299333 PRM2P04554 102 aa10.89□□□□□ -0.67
SCN3B-201ENST00000299333 TNFRSF13BO14836 293 aaPredicted RBP10.88□□□□□ -0.67
SCN3B-201ENST00000299333 RPS28P62857 69 aaKnown RBP10.88□□□□□ -0.67
SCN3B-201ENST00000299333 Q6ZVQ6 151 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms