RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 Q6ZSN1 163 aa8.33□□□□□ -1.08
TRUB1-201ENST00000298746 UBE2E2Q96LR5 201 aa8.33□□□□□ -1.08
TRUB1-201ENST00000298746 CCDC168Q8NDH2 2452 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 ABCA2Q9BZC7 2435 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 TRGV1A0A0A0MS02 117 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 UBE2L6O14933 153 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 INAFM2P0DMQ5 153 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 LINC00158P58513 81 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 DEFB136Q30KP8 78 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 DYNLRB2Q8TF09 96 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 LOC107984640A0A0U1RRK4 108 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 IGHV4-59P01825 116 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 Q8N2B8 174 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 C3orf22Q8N5N4 141 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 XCL2Q9UBD3 114 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 A6NDX4 124 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 LY6DQ14210 128 aa8.32□□□□□ -1.08
TRUB1-201ENST00000298746 CITED2Q99967 270 aaPredicted RBP8.32□□□□□ -1.08
TRUB1-201ENST00000298746 TRBV7-7A0A0K0K1E9 115 aa8.31□□□□□ -1.08
TRUB1-201ENST00000298746 NDUFA1O15239 70 aa8.31□□□□□ -1.08
TRUB1-201ENST00000298746 RNASE1P07998 156 aaKnown RBP8.31□□□□□ -1.08
TRUB1-201ENST00000298746 COX6A2Q02221 97 aa8.31□□□□□ -1.08
TRUB1-201ENST00000298746 CFHR3Q02985 330 aa8.31□□□□□ -1.08
TRUB1-201ENST00000298746 SDIM1Q6ZPB5 146 aa8.31□□□□□ -1.08
TRUB1-201ENST00000298746 VPREB3Q9UKI3 123 aa8.31□□□□□ -1.08
TRUB1-201ENST00000298746 UQCRQO14949 82 aa8.31□□□□□ -1.08
TRUB1-201ENST00000298746 TIRAPP58753 221 aa8.31□□□□□ -1.08
TRUB1-201ENST00000298746 CCL19Q99731 98 aa8.31□□□□□ -1.08
TRUB1-201ENST00000298746 CHCHD7Q9BUK0 85 aa8.31□□□□□ -1.08
TRUB1-201ENST00000298746 HIST1H4AP62805 103 aaKnown RBP8.3□□□□□ -1.08
TRUB1-201ENST00000298746 MYO18BQ8IUG5 2567 aa8.3□□□□□ -1.08
TRUB1-201ENST00000298746 C11orf68Q9H3H3 251 aaKnown RBP8.3□□□□□ -1.08
TRUB1-201ENST00000298746 C14orf132Q9NPU4 83 aa8.29□□□□□ -1.08
TRUB1-201ENST00000298746 hADV29S1A0JD25 119 aa8.29□□□□□ -1.08
TRUB1-201ENST00000298746 IGLV1-40P01703 118 aa8.29□□□□□ -1.08
TRUB1-201ENST00000298746 RBMY1A1P0DJD3 496 aaKnown RBP8.29□□□□□ -1.08
TRUB1-201ENST00000298746 RBMY1CP0DJD4 496 aa8.29□□□□□ -1.08
TRUB1-201ENST00000298746 PFN2P35080 140 aa8.29□□□□□ -1.08
TRUB1-201ENST00000298746 RBMY1FQ15415 496 aaKnown RBP8.29□□□□□ -1.08
TRUB1-201ENST00000298746 SMCR5Q8TEV8 140 aa8.29□□□□□ -1.08
TRUB1-201ENST00000298746 IMUPQ9GZP8 106 aa8.29□□□□□ -1.08
TRUB1-201ENST00000298746 ATP5G1P05496 136 aa8.29□□□□□ -1.08
TRUB1-201ENST00000298746 RPL36AP83881 106 aaKnown RBP8.29□□□□□ -1.08
TRUB1-201ENST00000298746 RPL36ALQ969Q0 106 aaKnown RBP8.29□□□□□ -1.08
TRUB1-201ENST00000298746 PEMTQ9UBM1 199 aa8.29□□□□□ -1.08
TRUB1-201ENST00000298746 NAV2Q8IVL1 2488 aa8.29□□□□□ -1.08
TRUB1-201ENST00000298746 A0A1B0GX51 115 aa8.28□□□□□ -1.08
TRUB1-201ENST00000298746 PAX4O43316 350 aa8.28□□□□□ -1.08
TRUB1-201ENST00000298746 MSMBP08118 114 aa8.28□□□□□ -1.08
TRUB1-201ENST00000298746 MAPK1IP1LQ8NDC0 245 aa8.28□□□□□ -1.08
TRUB1-201ENST00000298746 TIMM17BO60830 172 aa8.28□□□□□ -1.08
TRUB1-201ENST00000298746 SLURP1P55000 103 aa8.28□□□□□ -1.08
TRUB1-201ENST00000298746 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.28□□□□□ -1.08
TRUB1-201ENST00000298746 MALP21145 153 aa8.27□□□□□ -1.09
TRUB1-201ENST00000298746 IGHV4-30-2A0A087WSY4 118 aa8.27□□□□□ -1.09
TRUB1-201ENST00000298746 DEFB112Q30KQ8 113 aa8.27□□□□□ -1.09
TRUB1-201ENST00000298746 LINC00242Q5T6M2 205 aa8.27□□□□□ -1.09
TRUB1-201ENST00000298746 MIR7-3HGQ8N6C7 128 aa8.27□□□□□ -1.09
TRUB1-201ENST00000298746 CUBNO60494 3623 aa8.27□□□□□ -1.09
TRUB1-201ENST00000298746 HIST2H2BDQ6DRA6 164 aa8.26□□□□□ -1.09
TRUB1-201ENST00000298746 SOSTDC1Q6X4U4 206 aa8.26□□□□□ -1.09
TRUB1-201ENST00000298746 SND1-IT1Q9HBX3 110 aa8.26□□□□□ -1.09
TRUB1-201ENST00000298746 TRACP01848 142 aa8.26□□□□□ -1.09
TRUB1-201ENST00000298746 TRAV13-2A0A0B4J235 113 aa8.26□□□□□ -1.09
TRUB1-201ENST00000298746 J3KT08 172 aa8.26□□□□□ -1.09
TRUB1-201ENST00000298746 PSMB8P28062 276 aa8.26□□□□□ -1.09
TRUB1-201ENST00000298746 HIST2H2BCQ6DN03 193 aa8.26□□□□□ -1.09
TRUB1-201ENST00000298746 FAM218AQ96MZ4 157 aa8.26□□□□□ -1.09
TRUB1-201ENST00000298746 C19orf84I3L1E1 186 aa8.25□□□□□ -1.09
TRUB1-201ENST00000298746 INSP01308 110 aa8.25□□□□□ -1.09
TRUB1-201ENST00000298746 C11orf44Q8N8P7 122 aa8.25□□□□□ -1.09
TRUB1-201ENST00000298746 FAM104AQ969W3 186 aa8.25□□□□□ -1.09
TRUB1-201ENST00000298746 ATOX1O00244 68 aa8.25□□□□□ -1.09
TRUB1-201ENST00000298746 LECT2O14960 151 aa8.25□□□□□ -1.09
TRUB1-201ENST00000298746 COX7CP15954 63 aa8.25□□□□□ -1.09
TRUB1-201ENST00000298746 DEFB121Q5J5C9 76 aa8.25□□□□□ -1.09
TRUB1-201ENST00000298746 LRRK2Q5S007 2527 aa8.24□□□□□ -1.09
TRUB1-201ENST00000298746 AVPP01185 164 aa8.24□□□□□ -1.09
TRUB1-201ENST00000298746 DNAJC30Q96LL9 226 aa8.24□□□□□ -1.09
TRUB1-201ENST00000298746 TRGV2A0A075B6R0 118 aa8.24□□□□□ -1.09
TRUB1-201ENST00000298746 A0A087WVE0 104 aa8.24□□□□□ -1.09
TRUB1-201ENST00000298746 SMIM1B2RUZ4 78 aa8.24□□□□□ -1.09
TRUB1-201ENST00000298746 SLPIP03973 132 aa8.24□□□□□ -1.09
TRUB1-201ENST00000298746 LINC00526Q96FQ7 95 aa8.24□□□□□ -1.09
TRUB1-201ENST00000298746 STHQ8IWL8 128 aa8.23□□□□□ -1.09
TRUB1-201ENST00000298746 BSNQ9UPA5 3926 aa8.23□□□□□ -1.09
TRUB1-201ENST00000298746 B4DSR2 109 aa8.23□□□□□ -1.09
TRUB1-201ENST00000298746 EPG5Q9HCE0 2579 aa8.23□□□□□ -1.09
TRUB1-201ENST00000298746 ZFYVE26Q68DK2 2539 aa8.23□□□□□ -1.09
TRUB1-201ENST00000298746 UCNP55089 124 aa8.22□□□□□ -1.09
TRUB1-201ENST00000298746 ABCA12Q86UK0 2595 aa8.22□□□□□ -1.09
TRUB1-201ENST00000298746 NCR3O14931 201 aa8.22□□□□□ -1.09
TRUB1-201ENST00000298746 BRI3O95415 125 aa8.22□□□□□ -1.09
TRUB1-201ENST00000298746 GNLYP22749 145 aa8.22□□□□□ -1.09
TRUB1-201ENST00000298746 C10orf105Q8TEF2 133 aa8.22□□□□□ -1.09
TRUB1-201ENST00000298746 LINC01600Q96MT4 127 aa8.22□□□□□ -1.09
TRUB1-201ENST00000298746 C18orf65Q6ZTR6 163 aa8.21□□□□□ -1.09
TRUB1-201ENST00000298746 FAM19A5Q7Z5A7 132 aaPredicted RBP8.21□□□□□ -1.09
TRUB1-201ENST00000298746 C5orf38Q86SI9 138 aa8.21□□□□□ -1.09
TRUB1-201ENST00000298746 A0A1W2PRX2 142 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms