RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 C16orf74Q96GX8 76 aa12.7□□□□□ -0.38
TRIM9-201ENST00000298355 SIRPDQ9H106 197 aa12.7□□□□□ -0.38
TRIM9-201ENST00000298355 SLURP1P55000 103 aa12.7□□□□□ -0.38
TRIM9-201ENST00000298355 DEFB136Q30KP8 78 aa12.7□□□□□ -0.38
TRIM9-201ENST00000298355 IGF2-ASQ6U949 168 aa12.7□□□□□ -0.38
TRIM9-201ENST00000298355 SMIM11BQ8TCY0 68 aa12.7□□□□□ -0.38
TRIM9-201ENST00000298355 LINC01546A6NGU7 62 aa12.69□□□□□ -0.38
TRIM9-201ENST00000298355 NDUFB1O75438 58 aa12.69□□□□□ -0.38
TRIM9-201ENST00000298355 GOLGB1Q14789 3259 aaKnown RBP12.69□□□□□ -0.38
TRIM9-201ENST00000298355 IGHV4-59P01825 116 aa12.69□□□□□ -0.38
TRIM9-201ENST00000298355 GYPEP15421 78 aa12.69□□□□□ -0.38
TRIM9-201ENST00000298355 TRAV7A0A075B6U4 112 aa12.68□□□□□ -0.38
TRIM9-201ENST00000298355 UBE2BP63146 152 aa12.68□□□□□ -0.38
TRIM9-201ENST00000298355 PROK1P58294 105 aa12.68□□□□□ -0.38
TRIM9-201ENST00000298355 UBE2D4Q9Y2X8 147 aa12.68□□□□□ -0.38
TRIM9-201ENST00000298355 CRYGDP07320 174 aa12.67□□□□□ -0.38
TRIM9-201ENST00000298355 ADAMTSL4-AS1Q5T5F5 129 aa12.67□□□□□ -0.38
TRIM9-201ENST00000298355 IGHV4-38-2P0DP08 117 aa12.67□□□□□ -0.38
TRIM9-201ENST00000298355 RPS28P62857 69 aaKnown RBP12.67□□□□□ -0.38
TRIM9-201ENST00000298355 SBSPONQ8IVN8 264 aa12.67□□□□□ -0.38
TRIM9-201ENST00000298355 CHKB-CPT1BH3BT56 60 aa12.66□□□□□ -0.38
TRIM9-201ENST00000298355 NDUFS5O43920 106 aa12.66□□□□□ -0.38
TRIM9-201ENST00000298355 EBI3Q14213 229 aa12.66□□□□□ -0.38
TRIM9-201ENST00000298355 CCKP06307 115 aa12.66□□□□□ -0.38
TRIM9-201ENST00000298355 PRO3102Q9H379 93 aa12.66□□□□□ -0.38
TRIM9-201ENST00000298355 COX7BP24311 80 aa12.66□□□□□ -0.38
TRIM9-201ENST00000298355 DEFB112Q30KQ8 113 aa12.65□□□□□ -0.38
TRIM9-201ENST00000298355 CRYGAP11844 174 aa12.65□□□□□ -0.38
TRIM9-201ENST00000298355 KLLNB2CW77 178 aa12.64□□□□□ -0.39
TRIM9-201ENST00000298355 C22orf34Q6ZV56 151 aa12.64□□□□□ -0.39
TRIM9-201ENST00000298355 PRO0628Q9UI54 55 aa12.64□□□□□ -0.39
TRIM9-201ENST00000298355 K7EQG2 157 aa12.63□□□□□ -0.39
TRIM9-201ENST00000298355 C9orf85Q96MD7 179 aa12.63□□□□□ -0.39
TRIM9-201ENST00000298355 CAMK2N2Q96S95 79 aa12.63□□□□□ -0.39
TRIM9-201ENST00000298355 MIFP14174 115 aa12.63□□□□□ -0.39
TRIM9-201ENST00000298355 SPAG11BQ08648 103 aa12.62□□□□□ -0.39
TRIM9-201ENST00000298355 ZNF580Q9UK33 172 aa12.62□□□□□ -0.39
TRIM9-201ENST00000298355 ETDCA0A1B0GVM5 59 aa12.62□□□□□ -0.39
TRIM9-201ENST00000298355 CLPSL1A2RUU4 121 aa12.62□□□□□ -0.39
TRIM9-201ENST00000298355 C6orf99Q4VX62 202 aa12.62□□□□□ -0.39
TRIM9-201ENST00000298355 RPL28P46779 137 aaKnown RBP12.61□□□□□ -0.39
TRIM9-201ENST00000298355 FAM19A3Q7Z5A8 133 aa12.61□□□□□ -0.39
TRIM9-201ENST00000298355 RNF223E7ERA6 249 aa12.6□□□□□ -0.39
TRIM9-201ENST00000298355 MAPK1IP1LQ8NDC0 245 aa12.59□□□□□ -0.39
TRIM9-201ENST00000298355 TMEM89A2RUT3 159 aa12.59□□□□□ -0.39
TRIM9-201ENST00000298355 C10orf142B7Z368 130 aa12.59□□□□□ -0.39
TRIM9-201ENST00000298355 COL5A1P20908 1838 aaPredicted RBP12.59□□□□□ -0.39
TRIM9-201ENST00000298355 SOSTDC1Q6X4U4 206 aa12.58□□□□□ -0.4
TRIM9-201ENST00000298355 C4orf26Q17RF5 130 aa12.58□□□□□ -0.4
TRIM9-201ENST00000298355 IGHV4-61A0A0C4DH41 118 aa12.58□□□□□ -0.4
TRIM9-201ENST00000298355 Q6ZTI0 123 aa12.58□□□□□ -0.4
TRIM9-201ENST00000298355 PTPRSQ13332 1948 aa12.57□□□□□ -0.4
TRIM9-201ENST00000298355 Q8N6K4 173 aa12.57□□□□□ -0.4
TRIM9-201ENST00000298355 IGKV2D-24A0A075B6R9 120 aa12.56□□□□□ -0.4
TRIM9-201ENST00000298355 LINC00846Q9NV44 126 aa12.56□□□□□ -0.4
TRIM9-201ENST00000298355 A6NDX4 124 aa12.55□□□□□ -0.4
TRIM9-201ENST00000298355 CCL18P55774 89 aa12.55□□□□□ -0.4
TRIM9-201ENST00000298355 MAP6D1Q9H9H5 199 aa12.55□□□□□ -0.4
TRIM9-201ENST00000298355 A0A087WYN8 130 aa12.55□□□□□ -0.4
TRIM9-201ENST00000298355 OTOGLQ3ZCN5 2332 aa12.55□□□□□ -0.4
TRIM9-201ENST00000298355 AMELXQ99217 191 aa12.55□□□□□ -0.4
TRIM9-201ENST00000298355 SEC61GP60059 68 aa12.54□□□□□ -0.4
TRIM9-201ENST00000298355 KIR2DL5BQ8NHK3 375 aa12.54□□□□□ -0.4
TRIM9-201ENST00000298355 LINC00242Q5T6M2 205 aa12.54□□□□□ -0.4
TRIM9-201ENST00000298355 FAM208BQ5VWN6 2430 aa12.53□□□□□ -0.4
TRIM9-201ENST00000298355 CCL24O00175 119 aa12.53□□□□□ -0.4
TRIM9-201ENST00000298355 TET2Q6N021 2002 aaPredicted RBP12.53□□□□□ -0.4
TRIM9-201ENST00000298355 ANKHD1Q8IWZ3 2542 aaKnown RBP12.53□□□□□ -0.4
TRIM9-201ENST00000298355 FHL3Q13643 280 aa12.53□□□□□ -0.4
TRIM9-201ENST00000298355 C4orf48Q5BLP8 95 aa12.53□□□□□ -0.4
TRIM9-201ENST00000298355 Q6ZQY7 126 aa12.53□□□□□ -0.4
TRIM9-201ENST00000298355 NHLRC4P0CG21 123 aaPredicted RBP12.53□□□□□ -0.4
TRIM9-201ENST00000298355 Q96MF0 132 aa12.53□□□□□ -0.4
TRIM9-201ENST00000298355 LRP4O75096 1905 aa12.52□□□□□ -0.4
TRIM9-201ENST00000298355 F8W735 103 aaPredicted RBP12.52□□□□□ -0.4
TRIM9-201ENST00000298355 SMIM1B2RUZ4 78 aa12.51□□□□□ -0.41
TRIM9-201ENST00000298355 C9orf66Q5T8R8 295 aa12.51□□□□□ -0.41
TRIM9-201ENST00000298355 FAM19A1Q7Z5A9 133 aa12.51□□□□□ -0.41
TRIM9-201ENST00000298355 NTM-AS1Q6ZSK4 140 aa12.51□□□□□ -0.41
TRIM9-201ENST00000298355 J3QKU1 62 aa12.5□□□□□ -0.41
TRIM9-201ENST00000298355 C2CD3Q4AC94 2353 aa12.5□□□□□ -0.41
TRIM9-201ENST00000298355 LINC00269Q8N2A0 174 aa12.5□□□□□ -0.41
TRIM9-201ENST00000298355 SPART-AS1P0CW21 52 aa12.49□□□□□ -0.41
TRIM9-201ENST00000298355 HILS1P60008 231 aa12.48□□□□□ -0.41
TRIM9-201ENST00000298355 TNFRSF13BO14836 293 aaPredicted RBP12.48□□□□□ -0.41
TRIM9-201ENST00000298355 LYRM9A8MSI8 78 aa12.48□□□□□ -0.41
TRIM9-201ENST00000298355 ACACBO00763 2458 aa12.48□□□□□ -0.41
TRIM9-201ENST00000298355 CEP192Q8TEP8 1941 aa12.48□□□□□ -0.41
TRIM9-201ENST00000298355 SPG11Q96JI7 2443 aa12.48□□□□□ -0.41
TRIM9-201ENST00000298355 COX6A2Q02221 97 aa12.47□□□□□ -0.41
TRIM9-201ENST00000298355 TRBV6-8A0A0A6YYG3 113 aa12.47□□□□□ -0.41
TRIM9-201ENST00000298355 MRGPRG-AS1Q2M3A8 158 aa12.47□□□□□ -0.41
TRIM9-201ENST00000298355 Q8N814 137 aa12.47□□□□□ -0.41
TRIM9-201ENST00000298355 CHCHD7Q9BUK0 85 aa12.47□□□□□ -0.41
TRIM9-201ENST00000298355 TRBV7-6A0A0J9YX20 115 aa12.47□□□□□ -0.41
TRIM9-201ENST00000298355 ESM1Q9NQ30 184 aa12.47□□□□□ -0.41
TRIM9-201ENST00000298355 CDC42SE2Q9NRR3 84 aa12.47□□□□□ -0.41
TRIM9-201ENST00000298355 TRBV6-4A0A1B0GX49 114 aa12.46□□□□□ -0.41
TRIM9-201ENST00000298355 CHCHD10Q8WYQ3 142 aaPredicted RBP12.46□□□□□ -0.41
TRIM9-201ENST00000298355 WNK1Q9H4A3 2382 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms