RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 LY6G6DO95868 133 aa4.31□□□□□ -1.72
CDKAL1-201ENST00000274695 CRYGAP11844 174 aa4.31□□□□□ -1.72
CDKAL1-201ENST00000274695 LINC00643Q86TS7 51 aa4.31□□□□□ -1.72
CDKAL1-201ENST00000274695 SVILO95425 2214 aa4.31□□□□□ -1.72
CDKAL1-201ENST00000274695 TEX49A0A1B0GTD5 131 aa4.31□□□□□ -1.72
CDKAL1-201ENST00000274695 RPL28P46779 137 aaKnown RBP4.31□□□□□ -1.72
CDKAL1-201ENST00000274695 RBMY1FQ15415 496 aaKnown RBP4.31□□□□□ -1.72
CDKAL1-201ENST00000274695 KRTAP21-3Q3LHN1 58 aa4.31□□□□□ -1.72
CDKAL1-201ENST00000274695 LINC00526Q96FQ7 95 aa4.31□□□□□ -1.72
CDKAL1-201ENST00000274695 XCL2Q9UBD3 114 aa4.31□□□□□ -1.72
CDKAL1-201ENST00000274695 SMIM1B2RUZ4 78 aa4.31□□□□□ -1.72
CDKAL1-201ENST00000274695 CCDC179H3BU77 68 aa4.31□□□□□ -1.72
CDKAL1-201ENST00000274695 IGHV3OR16-13A0A075B7E8 117 aa4.3□□□□□ -1.72
CDKAL1-201ENST00000274695 S100A4P26447 101 aaKnown RBP4.3□□□□□ -1.72
CDKAL1-201ENST00000274695 SMCR5Q8TEV8 140 aa4.3□□□□□ -1.72
CDKAL1-201ENST00000274695 JPT2Q9H910 190 aa4.3□□□□□ -1.72
CDKAL1-201ENST00000274695 IGHV3OR16-10A0A075B7F0 116 aa4.3□□□□□ -1.72
CDKAL1-201ENST00000274695 A0A0J9YXV3 536 aa4.3□□□□□ -1.72
CDKAL1-201ENST00000274695 MGPP08493 103 aa4.3□□□□□ -1.72
CDKAL1-201ENST00000274695 FHL2Q14192 279 aa4.3□□□□□ -1.72
CDKAL1-201ENST00000274695 VPREB3Q9UKI3 123 aa4.3□□□□□ -1.72
CDKAL1-201ENST00000274695 IGHV3-35A0A0C4DH35 117 aa4.29□□□□□ -1.72
CDKAL1-201ENST00000274695 IGHV3-66A0A0C4DH42 116 aa4.29□□□□□ -1.72
CDKAL1-201ENST00000274695 BCE1O60756 84 aa4.29□□□□□ -1.72
CDKAL1-201ENST00000274695 PRB4P10163 310 aaPredicted RBP4.29□□□□□ -1.72
CDKAL1-201ENST00000274695 PFN2P35080 140 aa4.29□□□□□ -1.72
CDKAL1-201ENST00000274695 LINC00308Q8TCZ7 52 aa4.29□□□□□ -1.72
CDKAL1-201ENST00000274695 UPK3BQ9BT76 320 aa4.29□□□□□ -1.72
CDKAL1-201ENST00000274695 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.29□□□□□ -1.72
CDKAL1-201ENST00000274695 C10orf105Q8TEF2 133 aa4.29□□□□□ -1.72
CDKAL1-201ENST00000274695 NDUFA12Q9UI09 145 aa4.29□□□□□ -1.72
CDKAL1-201ENST00000274695 OTOGLQ3ZCN5 2332 aa4.28□□□□□ -1.72
CDKAL1-201ENST00000274695 UQCRQO14949 82 aa4.28□□□□□ -1.72
CDKAL1-201ENST00000274695 TMEM101Q96IK0 257 aa4.28□□□□□ -1.72
CDKAL1-201ENST00000274695 CSMD1Q96PZ7 3565 aa4.28□□□□□ -1.72
CDKAL1-201ENST00000274695 BOD1L1Q8NFC6 3051 aa4.28□□□□□ -1.72
CDKAL1-201ENST00000274695 ZNF292O60281 2723 aa4.28□□□□□ -1.72
CDKAL1-201ENST00000274695 RELNP78509 3460 aa4.28□□□□□ -1.72
CDKAL1-201ENST00000274695 TRBV10-1A0A0K0K1A3 114 aa4.28□□□□□ -1.72
CDKAL1-201ENST00000274695 COX6CP09669 75 aa4.28□□□□□ -1.72
CDKAL1-201ENST00000274695 PLA2G2AP14555 144 aa4.28□□□□□ -1.72
CDKAL1-201ENST00000274695 HERVK_113P63121 156 aa4.28□□□□□ -1.72
CDKAL1-201ENST00000274695 AKAP13Q12802 2813 aa4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 LY6HO94772 140 aa4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 SFTA2Q6UW10 78 aa4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 SOSTDC1Q6X4U4 206 aa4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 C3orf22Q8N5N4 141 aa4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 OCR1Q9BZK8 76 aa4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 DMXL1Q9Y485 3027 aa4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 IGHV3OR16-8A0A075B7F1 116 aa4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 CACNA1BQ00975 2339 aa4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 PRR3P79522 188 aaKnown RBP4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 Q6JHZ5 121 aa4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 OPRPNQ99935 248 aaPredicted RBP4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 BPESC1Q9GZL8 116 aa4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 SS18L2Q9UHA2 77 aa4.27□□□□□ -1.73
CDKAL1-201ENST00000274695 DSCR9P59020 149 aa4.26□□□□□ -1.73
CDKAL1-201ENST00000274695 SNRPD3P62318 126 aaKnown RBP4.26□□□□□ -1.73
CDKAL1-201ENST00000274695 ATMQ13315 3056 aa4.26□□□□□ -1.73
CDKAL1-201ENST00000274695 ADGRG4Q8IZF6 3080 aa4.26□□□□□ -1.73
CDKAL1-201ENST00000274695 CELSR1Q9NYQ6 3014 aa4.26□□□□□ -1.73
CDKAL1-201ENST00000274695 TRBV10-3A0A0K0K1G6 114 aa4.26□□□□□ -1.73
CDKAL1-201ENST00000274695 TTC32Q5I0X7 151 aa4.26□□□□□ -1.73
CDKAL1-201ENST00000274695 C9orf66Q5T8R8 295 aa4.26□□□□□ -1.73
CDKAL1-201ENST00000274695 PRRC2AP48634 2157 aaKnown RBP4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 TRAV12-3A0A0B4J271 114 aa4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 INAFM2P0DMQ5 153 aa4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 CD28P10747 220 aa4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 COX7CP15954 63 aa4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 DEFB1P60022 68 aa4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 C1orf195Q5TG92 126 aa4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 DUX3Q96PT4 197 aa4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 DHRS4-AS1Q9P1J3 65 aa4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 LAMA5O15230 3695 aa4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 ANK3Q12955 4377 aaKnown RBP4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 IGHV4-30-2A0A087WSY4 118 aa4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 NDUFC2-KCTD14E9PQ53 114 aa4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 SS18Q15532 418 aa4.25□□□□□ -1.73
CDKAL1-201ENST00000274695 A0A087X002 238 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 TRAV8-3A0A0A6YYJ7 113 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 EMP1P54849 157 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 DAZ2Q13117 558 aaKnown RBP4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 ZNF56Q15929 161 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 DAZ4Q86SG3 579 aaKnown RBP4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 SMIM29Q86T20 159 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 TMEM86BQ8N661 226 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 DAZ3Q9NR90 486 aaKnown RBP4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 IGKV2-28A0A075B6P5 120 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 IGHV3-49A0A0A0MS15 119 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 IGKV2D-28P01615 120 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 CDC42SE2Q9NRR3 84 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 CR1P17927 2039 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 IGHV3-74A0A0B4J1X5 117 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 COX6A2Q02221 97 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 ATP5EP2Q5VTU8 51 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 ZNF702PQ9H963 129 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 CDKN2A-AS1Q9UH64 79 aa4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 KLK5Q9Y337 293 aaPredicted RBP4.24□□□□□ -1.73
CDKAL1-201ENST00000274695 BDP1A6H8Y1 2624 aa4.23□□□□□ -1.73
CDKAL1-201ENST00000274695 TRAV13-2A0A0B4J235 113 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms