RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 DNAL4O96015 105 aa10.52□□□□□ -0.73
SCARF1-201ENST00000263071 FHL2Q14192 279 aa10.52□□□□□ -0.73
SCARF1-201ENST00000263071 LINC01561Q8N1V8 128 aa10.52□□□□□ -0.73
SCARF1-201ENST00000263071 UPK3BQ9BT76 320 aa10.52□□□□□ -0.73
SCARF1-201ENST00000263071 ZNF580Q9UK33 172 aa10.51□□□□□ -0.73
SCARF1-201ENST00000263071 SDHAF1A6NFY7 115 aa10.51□□□□□ -0.73
SCARF1-201ENST00000263071 INAFM2P0DMQ5 153 aa10.51□□□□□ -0.73
SCARF1-201ENST00000263071 Q8N6K4 173 aa10.51□□□□□ -0.73
SCARF1-201ENST00000263071 ACANP16112 2415 aa10.51□□□□□ -0.73
SCARF1-201ENST00000263071 C20orf197Q8N268 126 aa10.51□□□□□ -0.73
SCARF1-201ENST00000263071 LEPROTO15243 131 aa10.5□□□□□ -0.73
SCARF1-201ENST00000263071 TIRAPP58753 221 aa10.5□□□□□ -0.73
SCARF1-201ENST00000263071 ZFAND2AQ8N6M9 145 aa10.5□□□□□ -0.73
SCARF1-201ENST00000263071 C5orf56Q8N8D9 126 aa10.5□□□□□ -0.73
SCARF1-201ENST00000263071 IGHV3OR16-12A0A075B7B8 117 aa10.5□□□□□ -0.73
SCARF1-201ENST00000263071 BAALC-AS2P0C853 105 aa10.5□□□□□ -0.73
SCARF1-201ENST00000263071 DCANP1Q8TF63 244 aa10.5□□□□□ -0.73
SCARF1-201ENST00000263071 SERP1Q9Y6X1 66 aa10.5□□□□□ -0.73
SCARF1-201ENST00000263071 C19orf84I3L1E1 186 aa10.49□□□□□ -0.73
SCARF1-201ENST00000263071 C9orf139Q6ZV77 190 aa10.49□□□□□ -0.73
SCARF1-201ENST00000263071 AMELXQ99217 191 aa10.49□□□□□ -0.73
SCARF1-201ENST00000263071 MOB4Q9Y3A3 225 aa10.49□□□□□ -0.73
SCARF1-201ENST00000263071 RBMY1BA6NDE4 496 aaKnown RBP10.48□□□□□ -0.73
SCARF1-201ENST00000263071 RBMY1EA6NEQ0 496 aaKnown RBP10.48□□□□□ -0.73
SCARF1-201ENST00000263071 RBMY1DP0C7P1 496 aaKnown RBP10.48□□□□□ -0.73
SCARF1-201ENST00000263071 RBMY1A1P0DJD3 496 aaKnown RBP10.48□□□□□ -0.73
SCARF1-201ENST00000263071 RBMY1CP0DJD4 496 aa10.48□□□□□ -0.73
SCARF1-201ENST00000263071 RBMY1FQ15415 496 aaKnown RBP10.48□□□□□ -0.73
SCARF1-201ENST00000263071 IGHV4-61A0A0C4DH41 118 aa10.48□□□□□ -0.73
SCARF1-201ENST00000263071 A0A0J9YXY3 114 aa10.48□□□□□ -0.73
SCARF1-201ENST00000263071 SUMO4Q6EEV6 95 aa10.48□□□□□ -0.73
SCARF1-201ENST00000263071 C9orf47Q6ZRZ4 202 aa10.48□□□□□ -0.73
SCARF1-201ENST00000263071 ANKRD17O75179 2603 aaKnown RBP10.47□□□□□ -0.73
SCARF1-201ENST00000263071 MUC4Q99102 2169 aa10.47□□□□□ -0.73
SCARF1-201ENST00000263071 SMIM26A0A096LP01 95 aa10.47□□□□□ -0.73
SCARF1-201ENST00000263071 NDUFC2-KCTD14E9PQ53 114 aa10.47□□□□□ -0.73
SCARF1-201ENST00000263071 IGHV3-38A0A0C4DH36 116 aa10.47□□□□□ -0.73
SCARF1-201ENST00000263071 NBL1P41271 181 aa10.47□□□□□ -0.73
SCARF1-201ENST00000263071 C11orf44Q8N8P7 122 aa10.47□□□□□ -0.73
SCARF1-201ENST00000263071 FBN2P35556 2912 aa10.46□□□□□ -0.73
SCARF1-201ENST00000263071 A8MZ25 164 aa10.46□□□□□ -0.73
SCARF1-201ENST00000263071 ZNF876PQ49A33 203 aa10.46□□□□□ -0.73
SCARF1-201ENST00000263071 DAND5Q8N907 189 aa10.46□□□□□ -0.73
SCARF1-201ENST00000263071 ZNF625Q96I27 306 aaPredicted RBP10.46□□□□□ -0.73
SCARF1-201ENST00000263071 CFAP46Q8IYW2 2715 aa10.46□□□□□ -0.73
SCARF1-201ENST00000263071 ZNF462Q96JM2 2506 aa10.46□□□□□ -0.73
SCARF1-201ENST00000263071 RNASE3P12724 160 aaKnown RBP10.46□□□□□ -0.73
SCARF1-201ENST00000263071 LMO4P61968 165 aa10.46□□□□□ -0.73
SCARF1-201ENST00000263071 IGHG2P01859 326 aa10.46□□□□□ -0.74
SCARF1-201ENST00000263071 GNLYP22749 145 aa10.46□□□□□ -0.74
SCARF1-201ENST00000263071 COX8CQ7Z4L0 72 aa10.46□□□□□ -0.74
SCARF1-201ENST00000263071 IGHV3-16A0A0C4DH30 117 aa10.45□□□□□ -0.74
SCARF1-201ENST00000263071 FAM223BA6NKX1 122 aa10.45□□□□□ -0.74
SCARF1-201ENST00000263071 GHRHP01286 108 aa10.45□□□□□ -0.74
SCARF1-201ENST00000263071 RETNQ9HD89 108 aa10.45□□□□□ -0.74
SCARF1-201ENST00000263071 HIVEP2P31629 2446 aa10.45□□□□□ -0.74
SCARF1-201ENST00000263071 PROK1P58294 105 aa10.45□□□□□ -0.74
SCARF1-201ENST00000263071 C11orf71Q6IPW1 123 aa10.45□□□□□ -0.74
SCARF1-201ENST00000263071 GPHB5Q86YW7 130 aa10.45□□□□□ -0.74
SCARF1-201ENST00000263071 TMEM141Q96I45 108 aa10.45□□□□□ -0.74
SCARF1-201ENST00000263071 IGHV1-69DA0A0B4J2H0 117 aa10.45□□□□□ -0.74
SCARF1-201ENST00000263071 A0A0J9YXV3 536 aa10.45□□□□□ -0.74
SCARF1-201ENST00000263071 PSMB8P28062 276 aa10.44□□□□□ -0.74
SCARF1-201ENST00000263071 TSHBP01222 138 aa10.44□□□□□ -0.74
SCARF1-201ENST00000263071 DEFB136Q30KP8 78 aa10.44□□□□□ -0.74
SCARF1-201ENST00000263071 RBM3P98179 157 aaKnown RBP10.43□□□□□ -0.74
SCARF1-201ENST00000263071 NF1P21359 2839 aa10.43□□□□□ -0.74
SCARF1-201ENST00000263071 PPP1R17O96001 155 aa10.43□□□□□ -0.74
SCARF1-201ENST00000263071 CHD6Q8TD26 2715 aa10.43□□□□□ -0.74
SCARF1-201ENST00000263071 NXPH4O95158 308 aa10.42□□□□□ -0.74
SCARF1-201ENST00000263071 IGHV1-69P01742 117 aa10.42□□□□□ -0.74
SCARF1-201ENST00000263071 TMEM61Q8N0U2 210 aa10.42□□□□□ -0.74
SCARF1-201ENST00000263071 IGIPA6NJ69 53 aa10.41□□□□□ -0.74
SCARF1-201ENST00000263071 VCYO14598 125 aa10.41□□□□□ -0.74
SCARF1-201ENST00000263071 LINC00482Q8N8I6 264 aa10.41□□□□□ -0.74
SCARF1-201ENST00000263071 COPS9Q8WXC6 57 aa10.41□□□□□ -0.74
SCARF1-201ENST00000263071 TRAV23DV6A0A075B6W5 121 aa10.41□□□□□ -0.74
SCARF1-201ENST00000263071 IGKV3OR2-268A0A0C4DH90 116 aa10.4□□□□□ -0.74
SCARF1-201ENST00000263071 Q9UF83 564 aa10.4□□□□□ -0.74
SCARF1-201ENST00000263071 IGHV4-59P01825 116 aa10.4□□□□□ -0.75
SCARF1-201ENST00000263071 CD28P10747 220 aa10.4□□□□□ -0.75
SCARF1-201ENST00000263071 NDUFA12Q9UI09 145 aa10.4□□□□□ -0.75
SCARF1-201ENST00000263071 IGHV4-30-2A0A087WSY4 118 aa10.39□□□□□ -0.75
SCARF1-201ENST00000263071 AVPP01185 164 aa10.39□□□□□ -0.75
SCARF1-201ENST00000263071 C6orf226Q5I0X4 101 aa10.39□□□□□ -0.75
SCARF1-201ENST00000263071 Q6JHZ5 121 aa10.39□□□□□ -0.75
SCARF1-201ENST00000263071 TIMM17AQ99595 171 aa10.39□□□□□ -0.75
SCARF1-201ENST00000263071 CCL19Q99731 98 aa10.39□□□□□ -0.75
SCARF1-201ENST00000263071 NDUFA4O00483 81 aa10.39□□□□□ -0.75
SCARF1-201ENST00000263071 COX7A2LO14548 114 aa10.39□□□□□ -0.75
SCARF1-201ENST00000263071 XCL1P47992 114 aa10.39□□□□□ -0.75
SCARF1-201ENST00000263071 ADAMTSL4-AS1Q5T5F5 129 aa10.39□□□□□ -0.75
SCARF1-201ENST00000263071 PSMG3-AS1Q96PY0 264 aa10.39□□□□□ -0.75
SCARF1-201ENST00000263071 XCL2Q9UBD3 114 aa10.39□□□□□ -0.75
SCARF1-201ENST00000263071 IGHV3-30-3P0DP02 117 aa10.38□□□□□ -0.75
SCARF1-201ENST00000263071 ITLN2Q8WWU7 325 aaPredicted RBP10.38□□□□□ -0.75
SCARF1-201ENST00000263071 MIAQ16674 131 aa10.38□□□□□ -0.75
SCARF1-201ENST00000263071 TEX15Q9BXT5 2789 aa10.38□□□□□ -0.75
SCARF1-201ENST00000263071 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.38□□□□□ -0.75
SCARF1-201ENST00000263071 IGKV2-29A2NJV5 120 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms