RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 RPS10P5Q9NQ39 176 aa12.31□□□□□ -0.44
UPK3B-201ENST00000257632 NDUFA5Q16718 116 aa12.3□□□□□ -0.44
UPK3B-201ENST00000257632 ABCA13Q86UQ4 5058 aa12.29□□□□□ -0.44
UPK3B-201ENST00000257632 USP17L23D6RBM5 183 aa12.29□□□□□ -0.44
UPK3B-201ENST00000257632 CDK2AP2O75956 126 aa12.29□□□□□ -0.44
UPK3B-201ENST00000257632 MRPL52Q86TS9 123 aaKnown RBP12.29□□□□□ -0.44
UPK3B-201ENST00000257632 KRTAP4-5Q9BYR2 181 aa12.29□□□□□ -0.44
UPK3B-201ENST00000257632 LAMTOR2Q9Y2Q5 125 aa12.29□□□□□ -0.44
UPK3B-201ENST00000257632 APOC3P02656 99 aa12.28□□□□□ -0.44
UPK3B-201ENST00000257632 KRTAP10-1P60331 282 aa12.28□□□□□ -0.44
UPK3B-201ENST00000257632 KRTAP26-1Q6PEX3 210 aa12.28□□□□□ -0.44
UPK3B-201ENST00000257632 MAP1LC3AQ9H492 121 aa12.28□□□□□ -0.44
UPK3B-201ENST00000257632 RAB5AP20339 215 aa12.27□□□□□ -0.45
UPK3B-201ENST00000257632 LRP1BQ9NZR2 4599 aa12.27□□□□□ -0.45
UPK3B-201ENST00000257632 DNAH5Q8TE73 4624 aa12.26□□□□□ -0.45
UPK3B-201ENST00000257632 LOC389332A0A1B0GUA5 103 aa12.26□□□□□ -0.45
UPK3B-201ENST00000257632 GAGE12HA6NDE8 117 aa12.25□□□□□ -0.45
UPK3B-201ENST00000257632 ZNF664Q8N3J9 261 aa12.25□□□□□ -0.45
UPK3B-201ENST00000257632 CHCHD10Q8WYQ3 142 aaPredicted RBP12.25□□□□□ -0.45
UPK3B-201ENST00000257632 CDC42SE2Q9NRR3 84 aa12.25□□□□□ -0.45
UPK3B-201ENST00000257632 UBE2D4Q9Y2X8 147 aa12.25□□□□□ -0.45
UPK3B-201ENST00000257632 SNAPINO95295 136 aa12.24□□□□□ -0.45
UPK3B-201ENST00000257632 SVBPQ8N300 66 aa12.24□□□□□ -0.45
UPK3B-201ENST00000257632 SS18Q15532 418 aa12.23□□□□□ -0.45
UPK3B-201ENST00000257632 COX19Q49B96 90 aa12.23□□□□□ -0.45
UPK3B-201ENST00000257632 CSDC2Q9Y534 153 aaKnown RBP12.23□□□□□ -0.45
UPK3B-201ENST00000257632 LINC00959A0A1B0GUT2 108 aa12.22□□□□□ -0.45
UPK3B-201ENST00000257632 PRSS47A8MTI9 375 aa12.22□□□□□ -0.45
UPK3B-201ENST00000257632 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
UPK3B-201ENST00000257632 KIAA1644Q3SXP7 199 aa12.22□□□□□ -0.45
UPK3B-201ENST00000257632 TIMM21Q9BVV7 248 aa12.22□□□□□ -0.45
UPK3B-201ENST00000257632 GNB1LQ9BYB4 327 aa12.22□□□□□ -0.45
UPK3B-201ENST00000257632 PRSS1P07477 247 aa12.21□□□□□ -0.45
UPK3B-201ENST00000257632 XCL1P47992 114 aa12.21□□□□□ -0.45
UPK3B-201ENST00000257632 RNASE13Q5GAN3 156 aaKnown RBP12.21□□□□□ -0.45
UPK3B-201ENST00000257632 Q8N8P6 123 aa12.21□□□□□ -0.45
UPK3B-201ENST00000257632 HSPG2P98160 4391 aa12.21□□□□□ -0.46
UPK3B-201ENST00000257632 hDV102S1A0JD36 115 aa12.2□□□□□ -0.46
UPK3B-201ENST00000257632 CCL25O15444 150 aa12.2□□□□□ -0.46
UPK3B-201ENST00000257632 CFAP161Q6P656 301 aa12.2□□□□□ -0.46
UPK3B-201ENST00000257632 Q6ZUT4 128 aa12.2□□□□□ -0.46
UPK3B-201ENST00000257632 SPANXA1Q9NS26 97 aa12.2□□□□□ -0.46
UPK3B-201ENST00000257632 LINC01620Q4KN68 170 aa12.19□□□□□ -0.46
UPK3B-201ENST00000257632 AP5S1Q9NUS5 200 aa12.19□□□□□ -0.46
UPK3B-201ENST00000257632 MT-ND6P03923 174 aa12.18□□□□□ -0.46
UPK3B-201ENST00000257632 NXT2Q9NPJ8 142 aaKnown RBP12.18□□□□□ -0.46
UPK3B-201ENST00000257632 TRAV13-1A0A0B4J241 112 aa12.17□□□□□ -0.46
UPK3B-201ENST00000257632 IFI27P40305 119 aaPredicted RBP12.17□□□□□ -0.46
UPK3B-201ENST00000257632 FOXI1Q12951 378 aa12.17□□□□□ -0.46
UPK3B-201ENST00000257632 C1orf196B1AJZ1 125 aa12.16□□□□□ -0.46
UPK3B-201ENST00000257632 XGP55808 180 aa12.16□□□□□ -0.46
UPK3B-201ENST00000257632 FABP9Q0Z7S8 132 aa12.16□□□□□ -0.46
UPK3B-201ENST00000257632 ORMDL2Q53FV1 153 aa12.16□□□□□ -0.46
UPK3B-201ENST00000257632 MRPL18Q9H0U6 180 aaKnown RBP12.16□□□□□ -0.46
UPK3B-201ENST00000257632 TGIF2-C20orf24A0A0A6YYL0 155 aa12.15□□□□□ -0.46
UPK3B-201ENST00000257632 K7EMI3 77 aa12.15□□□□□ -0.46
UPK3B-201ENST00000257632 CD164L2Q6UWJ8 174 aa12.15□□□□□ -0.46
UPK3B-201ENST00000257632 CYSLTR1Q9Y271 337 aa12.15□□□□□ -0.46
UPK3B-201ENST00000257632 APOBP04114 4563 aaKnown RBP12.14□□□□□ -0.47
UPK3B-201ENST00000257632 HAMPP81172 84 aa12.14□□□□□ -0.47
UPK3B-201ENST00000257632 MRPS36P82909 103 aaKnown RBP12.14□□□□□ -0.47
UPK3B-201ENST00000257632 HIGD2BQ4VC39 106 aa12.14□□□□□ -0.47
UPK3B-201ENST00000257632 C15orf56Q8N910 161 aa12.14□□□□□ -0.47
UPK3B-201ENST00000257632 PRSS3P2Q8NHM4 247 aa12.14□□□□□ -0.47
UPK3B-201ENST00000257632 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
UPK3B-201ENST00000257632 FAM30AQ9NZY2 134 aa12.14□□□□□ -0.47
UPK3B-201ENST00000257632 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.13□□□□□ -0.47
UPK3B-201ENST00000257632 C2orf66Q6UXQ4 117 aa12.13□□□□□ -0.47
UPK3B-201ENST00000257632 ALKBH7Q9BT30 221 aaPredicted RBP12.13□□□□□ -0.47
UPK3B-201ENST00000257632 IFITM10A6NMD0 228 aa12.12□□□□□ -0.47
UPK3B-201ENST00000257632 G0S2P27469 103 aa12.12□□□□□ -0.47
UPK3B-201ENST00000257632 SLC7A5P1Q8MH63 180 aa12.12□□□□□ -0.47
UPK3B-201ENST00000257632 C9orf163Q8N9P6 203 aa12.12□□□□□ -0.47
UPK3B-201ENST00000257632 PYGO1Q9Y3Y4 419 aa12.12□□□□□ -0.47
UPK3B-201ENST00000257632 TRAPPC1Q9Y5R8 145 aa12.12□□□□□ -0.47
UPK3B-201ENST00000257632 IGHV1-58A0A0C4DH39 117 aa12.11□□□□□ -0.47
UPK3B-201ENST00000257632 MALP21145 153 aa12.11□□□□□ -0.47
UPK3B-201ENST00000257632 CNBPP62633 177 aaKnown RBP12.11□□□□□ -0.47
UPK3B-201ENST00000257632 Q8N1X5 172 aa12.11□□□□□ -0.47
UPK3B-201ENST00000257632 GVQW2A0A096LPI5 108 aaPredicted RBP12.1□□□□□ -0.47
UPK3B-201ENST00000257632 COX7A2LO14548 114 aa12.1□□□□□ -0.47
UPK3B-201ENST00000257632 Q6ZSA8 131 aa12.1□□□□□ -0.47
UPK3B-201ENST00000257632 TMEM141Q96I45 108 aa12.1□□□□□ -0.47
UPK3B-201ENST00000257632 IGLV4-3A0A075B6K6 122 aa12.09□□□□□ -0.47
UPK3B-201ENST00000257632 Q6ZN92 141 aa12.09□□□□□ -0.47
UPK3B-201ENST00000257632 FAM104AQ969W3 186 aa12.09□□□□□ -0.47
UPK3B-201ENST00000257632 TEX43Q6ZNM6 134 aa12.08□□□□□ -0.48
UPK3B-201ENST00000257632 FA2HQ7L5A8 372 aa12.08□□□□□ -0.48
UPK3B-201ENST00000257632 C5orf38Q86SI9 138 aa12.08□□□□□ -0.48
UPK3B-201ENST00000257632 SMCO4Q9NRQ5 59 aa12.08□□□□□ -0.48
UPK3B-201ENST00000257632 ZNF561-AS1K7EIQ3 104 aa12.07□□□□□ -0.48
UPK3B-201ENST00000257632 SMR3BP02814 79 aaPredicted RBP12.07□□□□□ -0.48
UPK3B-201ENST00000257632 C2orf88Q9BSF0 95 aa12.07□□□□□ -0.48
UPK3B-201ENST00000257632 IGHV3-64A0A075B6Q5 118 aa12.06□□□□□ -0.48
UPK3B-201ENST00000257632 SLPIP03973 132 aa12.06□□□□□ -0.48
UPK3B-201ENST00000257632 EPM2AB3EWF7 344 aa12.05□□□□□ -0.48
UPK3B-201ENST00000257632 APOMO95445 188 aa12.05□□□□□ -0.48
UPK3B-201ENST00000257632 VCX2Q9H322 139 aa12.05□□□□□ -0.48
UPK3B-201ENST00000257632 NPSP0C0P6 89 aa12.04□□□□□ -0.48
UPK3B-201ENST00000257632 PAPPA-AS1Q5QFB9 102 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms