RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ZNF56Q15929 161 aa9.19□□□□□ -0.94
VEGFA-201ENST00000230480 KIAA1644Q3SXP7 199 aa9.19□□□□□ -0.94
VEGFA-201ENST00000230480 VPS25Q9BRG1 176 aa9.19□□□□□ -0.94
VEGFA-201ENST00000230480 CHTOPQ9Y3Y2 248 aaKnown RBP9.19□□□□□ -0.94
VEGFA-201ENST00000230480 A0A1B0GXF2 115 aa9.18□□□□□ -0.94
VEGFA-201ENST00000230480 IGHV3-30P01768 117 aa9.18□□□□□ -0.94
VEGFA-201ENST00000230480 IGHV3-33P01772 117 aa9.18□□□□□ -0.94
VEGFA-201ENST00000230480 IGHV3-30-3P0DP02 117 aa9.18□□□□□ -0.94
VEGFA-201ENST00000230480 IGHV3-30-5P0DP03 117 aa9.18□□□□□ -0.94
VEGFA-201ENST00000230480 SEC11AP67812 179 aa9.18□□□□□ -0.94
VEGFA-201ENST00000230480 RNF151Q2KHN1 245 aa9.18□□□□□ -0.94
VEGFA-201ENST00000230480 BVES-AS1Q5T3Y7 98 aa9.18□□□□□ -0.94
VEGFA-201ENST00000230480 DAZ4Q86SG3 579 aaKnown RBP9.18□□□□□ -0.94
VEGFA-201ENST00000230480 PGLYRP4Q96LB8 373 aa9.18□□□□□ -0.94
VEGFA-201ENST00000230480 AP1S3Q96PC3 154 aa9.18□□□□□ -0.94
VEGFA-201ENST00000230480 DAZ3Q9NR90 486 aaKnown RBP9.18□□□□□ -0.94
VEGFA-201ENST00000230480 F5H697 171 aa9.17□□□□□ -0.94
VEGFA-201ENST00000230480 FUSP35637 526 aaKnown RBP eCLIP9.17□□□□□ -0.943e-8■□□□□ 10.5
VEGFA-201ENST00000230480 RPL36AP83881 106 aaKnown RBP9.17□□□□□ -0.94
VEGFA-201ENST00000230480 FAM19A2Q8N3H0 131 aa9.17□□□□□ -0.94
VEGFA-201ENST00000230480 MAPKAPK5-AS1Q8N8E1 139 aa9.17□□□□□ -0.94
VEGFA-201ENST00000230480 GATD1Q8NB37 220 aa9.17□□□□□ -0.94
VEGFA-201ENST00000230480 RPL36ALQ969Q0 106 aaKnown RBP9.17□□□□□ -0.94
VEGFA-201ENST00000230480 TRAV8-6A0A0B4J262 113 aa9.16□□□□□ -0.94
VEGFA-201ENST00000230480 LRCOL1A6NCL2 159 aa9.16□□□□□ -0.94
VEGFA-201ENST00000230480 A8MWL6 223 aa9.16□□□□□ -0.94
VEGFA-201ENST00000230480 RNASEKQ6P5S7 137 aaKnown RBP9.16□□□□□ -0.94
VEGFA-201ENST00000230480 RNF185Q96GF1 192 aa9.16□□□□□ -0.94
VEGFA-201ENST00000230480 DPH3P1Q9H4G8 78 aa9.16□□□□□ -0.94
VEGFA-201ENST00000230480 TRBV6-8A0A0A6YYG3 113 aa9.15□□□□□ -0.94
VEGFA-201ENST00000230480 TRAV26-2A0A0B4J265 109 aa9.15□□□□□ -0.94
VEGFA-201ENST00000230480 FAM231BA6NCW3 169 aa9.15□□□□□ -0.94
VEGFA-201ENST00000230480 HIGD1CA8MV81 97 aa9.15□□□□□ -0.94
VEGFA-201ENST00000230480 SYS1-DBNDD2H3BUS1 97 aa9.15□□□□□ -0.94
VEGFA-201ENST00000230480 MGPP08493 103 aa9.15□□□□□ -0.94
VEGFA-201ENST00000230480 TWIST1Q15672 202 aa9.15□□□□□ -0.94
VEGFA-201ENST00000230480 NUP35Q8NFH5 326 aa9.15□□□□□ -0.94
VEGFA-201ENST00000230480 GFRA4Q9GZZ7 299 aa9.15□□□□□ -0.94
VEGFA-201ENST00000230480 A0A087WTM6 91 aa9.14□□□□□ -0.95
VEGFA-201ENST00000230480 HBBP68871 147 aa9.14□□□□□ -0.95
VEGFA-201ENST00000230480 WFDC2Q14508 124 aa9.14□□□□□ -0.95
VEGFA-201ENST00000230480 MPV17L2Q567V2 206 aa9.14□□□□□ -0.95
VEGFA-201ENST00000230480 GTF2H5Q6ZYL4 71 aa9.14□□□□□ -0.95
VEGFA-201ENST00000230480 ATOH7Q8N100 152 aa9.14□□□□□ -0.95
VEGFA-201ENST00000230480 DEFB104AQ8WTQ1 72 aa9.14□□□□□ -0.95
VEGFA-201ENST00000230480 HSPB8Q9UJY1 196 aa9.14□□□□□ -0.95
VEGFA-201ENST00000230480 ABCA13Q86UQ4 5058 aa9.14□□□□□ -0.95
VEGFA-201ENST00000230480 MAJINQ3KP22 176 aa9.13□□□□□ -0.95
VEGFA-201ENST00000230480 SPATA12Q7Z6I5 190 aa9.13□□□□□ -0.95
VEGFA-201ENST00000230480 RPL39LQ96EH5 51 aaKnown RBP9.13□□□□□ -0.95
VEGFA-201ENST00000230480 MAP1LC3CQ9BXW4 147 aa9.13□□□□□ -0.95
VEGFA-201ENST00000230480 LEPROTL1O95214 131 aa9.12□□□□□ -0.95
VEGFA-201ENST00000230480 SMIM17P0DL12 118 aa9.12□□□□□ -0.95
VEGFA-201ENST00000230480 Q6ZVH6 145 aa9.12□□□□□ -0.95
VEGFA-201ENST00000230480 C10orf126Q8N4M7 172 aa9.12□□□□□ -0.95
VEGFA-201ENST00000230480 PCLOQ9Y6V0 5065 aa9.11□□□□□ -0.95
VEGFA-201ENST00000230480 IGHV1-24A0A0C4DH33 117 aa9.11□□□□□ -0.95
VEGFA-201ENST00000230480 COX8AP10176 69 aa9.11□□□□□ -0.95
VEGFA-201ENST00000230480 LINC01545Q5VT33 79 aa9.11□□□□□ -0.95
VEGFA-201ENST00000230480 ENHOQ6UWT2 76 aa9.11□□□□□ -0.95
VEGFA-201ENST00000230480 URB1-AS1Q96HZ7 61 aa9.11□□□□□ -0.95
VEGFA-201ENST00000230480 A0A1B0GUT8 65 aa9.1□□□□□ -0.95
VEGFA-201ENST00000230480 A0A1B0GW15 77 aa9.1□□□□□ -0.95
VEGFA-201ENST00000230480 A6NDN8 102 aa9.1□□□□□ -0.95
VEGFA-201ENST00000230480 TMEM238C9JI98 176 aa9.1□□□□□ -0.95
VEGFA-201ENST00000230480 H3BRM9 83 aa9.1□□□□□ -0.95
VEGFA-201ENST00000230480 SCGB1A1P11684 91 aa9.1□□□□□ -0.95
VEGFA-201ENST00000230480 LAGE3Q14657 143 aa9.1□□□□□ -0.95
VEGFA-201ENST00000230480 AMMECR1LQ6DCA0 310 aa9.1□□□□□ -0.95
VEGFA-201ENST00000230480 KRTAP26-1Q6PEX3 210 aa9.1□□□□□ -0.95
VEGFA-201ENST00000230480 NFE4Q86UQ8 179 aa9.1□□□□□ -0.95
VEGFA-201ENST00000230480 OR5A1Q8NGJ0 315 aa9.1□□□□□ -0.95
VEGFA-201ENST00000230480 Q9HAA7 133 aa9.1□□□□□ -0.95
VEGFA-201ENST00000230480 KLK12Q9UKR0 248 aa9.1□□□□□ -0.95
VEGFA-201ENST00000230480 AMN1Q8IY45 258 aa9.09□□□□□ -0.95
VEGFA-201ENST00000230480 FAT1Q14517 4588 aa9.09□□□□□ -0.96
VEGFA-201ENST00000230480 TRBV6-5A0A0K0K1A5 114 aa9.08□□□□□ -0.96
VEGFA-201ENST00000230480 C9orf118A6NHY6 69 aa9.08□□□□□ -0.96
VEGFA-201ENST00000230480 GAGE10A6NGK3 116 aa9.07□□□□□ -0.96
VEGFA-201ENST00000230480 H7C1H1 209 aa9.07□□□□□ -0.96
VEGFA-201ENST00000230480 K7EP34 96 aa9.07□□□□□ -0.96
VEGFA-201ENST00000230480 POLR2KP53803 58 aaKnown RBP9.07□□□□□ -0.96
VEGFA-201ENST00000230480 HSD52Q0P140 79 aa9.07□□□□□ -0.96
VEGFA-201ENST00000230480 GAGE6Q13070 117 aa9.07□□□□□ -0.96
VEGFA-201ENST00000230480 TMEM97Q5BJF2 176 aa9.07□□□□□ -0.96
VEGFA-201ENST00000230480 NRACQ8N912 160 aa9.07□□□□□ -0.96
VEGFA-201ENST00000230480 C20orf203Q8NBC4 194 aa9.07□□□□□ -0.96
VEGFA-201ENST00000230480 CHCHD7Q9BUK0 85 aa9.07□□□□□ -0.96
VEGFA-201ENST00000230480 IGLV4-60A0A075B6I1 120 aa9.06□□□□□ -0.96
VEGFA-201ENST00000230480 hDV102S1A0JD36 115 aa9.06□□□□□ -0.96
VEGFA-201ENST00000230480 SMKR1H3BMG3 65 aa9.06□□□□□ -0.96
VEGFA-201ENST00000230480 C2orf91Q6ZV80 131 aa9.06□□□□□ -0.96
VEGFA-201ENST00000230480 KRTAP4-5Q9BYR2 181 aa9.06□□□□□ -0.96
VEGFA-201ENST00000230480 PRR34Q9NV39 138 aa9.06□□□□□ -0.96
VEGFA-201ENST00000230480 C16orf90A8MZG2 172 aa9.05□□□□□ -0.96
VEGFA-201ENST00000230480 CAMPP49913 170 aa9.05□□□□□ -0.96
VEGFA-201ENST00000230480 KRTAP10-1P60331 282 aa9.05□□□□□ -0.96
VEGFA-201ENST00000230480 CHCHD5Q9BSY4 110 aa9.05□□□□□ -0.96
VEGFA-201ENST00000230480 SDHAF1A6NFY7 115 aa9.04□□□□□ -0.96
VEGFA-201ENST00000230480 RIGQ13278 110 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms