RNA–Protein interactions for RNA: ENST00000222718.6

HOXA2-201, Transcript of homeobox A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA2, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2-201ENST00000222718 GAGE12IP0CL82 117 aa12.45□□□□□ -0.42
HOXA2-201ENST00000222718 DGAT2L7PQ6IED9 249 aa12.45□□□□□ -0.42
HOXA2-201ENST00000222718 TRBV6-4A0A1B0GX49 114 aa12.44□□□□□ -0.42
HOXA2-201ENST00000222718 NAA38Q9BRA0 125 aaKnown RBP12.44□□□□□ -0.42
HOXA2-201ENST00000222718 Q6ZUT4 128 aa12.44□□□□□ -0.42
HOXA2-201ENST00000222718 CSDC2Q9Y534 153 aaKnown RBP12.44□□□□□ -0.42
HOXA2-201ENST00000222718 IGLL5B9A064 214 aa12.43□□□□□ -0.42
HOXA2-201ENST00000222718 GTSF1LQ9H1H1 148 aa12.43□□□□□ -0.42
HOXA2-201ENST00000222718 SPCS1Q9Y6A9 102 aa12.43□□□□□ -0.42
HOXA2-201ENST00000222718 GAGE12JA6NER3 117 aa12.42□□□□□ -0.42
HOXA2-201ENST00000222718 GAGE4Q13068 117 aa12.42□□□□□ -0.42
HOXA2-201ENST00000222718 GAGE5Q13069 117 aa12.42□□□□□ -0.42
HOXA2-201ENST00000222718 GAGE13Q4V321 117 aa12.42□□□□□ -0.42
HOXA2-201ENST00000222718 NSD1Q96L73 2696 aaPredicted RBP12.42□□□□□ -0.42
HOXA2-201ENST00000222718 UBE2D1P51668 147 aa12.41□□□□□ -0.42
HOXA2-201ENST00000222718 TIRAPP58753 221 aa12.41□□□□□ -0.42
HOXA2-201ENST00000222718 RNASE13Q5GAN3 156 aaKnown RBP12.41□□□□□ -0.42
HOXA2-201ENST00000222718 TRGV4A0A0C4DH28 118 aa12.41□□□□□ -0.42
HOXA2-201ENST00000222718 IGHV1-58A0A0C4DH39 117 aa12.41□□□□□ -0.42
HOXA2-201ENST00000222718 IGHV3-30-3P0DP02 117 aa12.41□□□□□ -0.42
HOXA2-201ENST00000222718 GEMIN7Q9H840 131 aaKnown RBP12.41□□□□□ -0.42
HOXA2-201ENST00000222718 FN1P02751 2386 aaKnown RBP12.41□□□□□ -0.42
HOXA2-201ENST00000222718 SMIM9A6NGZ8 99 aa12.4□□□□□ -0.42
HOXA2-201ENST00000222718 CITED1Q99966 193 aa12.4□□□□□ -0.42
HOXA2-201ENST00000222718 NTM-AS1Q6ZSK4 140 aa12.39□□□□□ -0.43
HOXA2-201ENST00000222718 SBSPONQ8IVN8 264 aa12.39□□□□□ -0.43
HOXA2-201ENST00000222718 KIR2DL5BQ8NHK3 375 aa12.39□□□□□ -0.43
HOXA2-201ENST00000222718 IGHV3-64A0A075B6Q5 118 aa12.39□□□□□ -0.43
HOXA2-201ENST00000222718 IGHV3-30P01768 117 aa12.39□□□□□ -0.43
HOXA2-201ENST00000222718 IGHV3-30-5P0DP03 117 aa12.39□□□□□ -0.43
HOXA2-201ENST00000222718 PRIMA1Q86XR5 153 aa12.39□□□□□ -0.43
HOXA2-201ENST00000222718 H7C423 109 aa12.38□□□□□ -0.43
HOXA2-201ENST00000222718 FAM19A3Q7Z5A8 133 aa12.38□□□□□ -0.43
HOXA2-201ENST00000222718 IGLV5-45A0A087WSX0 123 aa12.37□□□□□ -0.43
HOXA2-201ENST00000222718 FHL2Q14192 279 aa12.37□□□□□ -0.43
HOXA2-201ENST00000222718 VSIG2Q96IQ7 327 aa12.37□□□□□ -0.43
HOXA2-201ENST00000222718 DNHD1Q96M86 4753 aa12.37□□□□□ -0.43
HOXA2-201ENST00000222718 TMEM238C9JI98 176 aa12.37□□□□□ -0.43
HOXA2-201ENST00000222718 LINC00694P0DN24 101 aa12.37□□□□□ -0.43
HOXA2-201ENST00000222718 HERVK_113P63121 156 aa12.37□□□□□ -0.43
HOXA2-201ENST00000222718 LINC00612Q8N6U2 182 aa12.37□□□□□ -0.43
HOXA2-201ENST00000222718 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.37□□□□□ -0.43
HOXA2-201ENST00000222718 TMEM243Q9BU79 118 aa12.37□□□□□ -0.43
HOXA2-201ENST00000222718 UBE2L6O14933 153 aa12.35□□□□□ -0.43
HOXA2-201ENST00000222718 TMEM101Q96IK0 257 aa12.35□□□□□ -0.43
HOXA2-201ENST00000222718 MDFIQ99750 246 aa12.35□□□□□ -0.43
HOXA2-201ENST00000222718 TRAV8-3A0A0A6YYJ7 113 aa12.34□□□□□ -0.43
HOXA2-201ENST00000222718 A0A0J9YXY3 114 aa12.34□□□□□ -0.43
HOXA2-201ENST00000222718 C10orf126Q8N4M7 172 aa12.34□□□□□ -0.43
HOXA2-201ENST00000222718 CDC42SE2Q9NRR3 84 aa12.34□□□□□ -0.43
HOXA2-201ENST00000222718 X6R8D5 127 aa12.34□□□□□ -0.43
HOXA2-201ENST00000222718 JMJD1CQ15652 2540 aa12.33□□□□□ -0.44
HOXA2-201ENST00000222718 SPINK8P0C7L1 97 aa12.33□□□□□ -0.44
HOXA2-201ENST00000222718 SPATA3Q8NHX4 192 aa12.33□□□□□ -0.44
HOXA2-201ENST00000222718 CDKN2A-AS1Q9UH64 79 aa12.33□□□□□ -0.44
HOXA2-201ENST00000222718 NDUFA12Q9UI09 145 aa12.33□□□□□ -0.44
HOXA2-201ENST00000222718 LOC100131303A0A0U1RQF7 123 aa12.32□□□□□ -0.44
HOXA2-201ENST00000222718 APOC4P55056 127 aa12.32□□□□□ -0.44
HOXA2-201ENST00000222718 RPL24P83731 157 aaKnown RBP12.32□□□□□ -0.44
HOXA2-201ENST00000222718 LINC00242Q5T6M2 205 aa12.32□□□□□ -0.44
HOXA2-201ENST00000222718 WFDC9Q8NEX5 89 aa12.32□□□□□ -0.44
HOXA2-201ENST00000222718 PGPEP1Q9NXJ5 209 aa12.32□□□□□ -0.44
HOXA2-201ENST00000222718 DEFB130BP0DP73 79 aa12.32□□□□□ -0.44
HOXA2-201ENST00000222718 DEFB130AP0DP74 79 aa12.32□□□□□ -0.44
HOXA2-201ENST00000222718 ZFAND6Q6FIF0 208 aa12.32□□□□□ -0.44
HOXA2-201ENST00000222718 APOMO95445 188 aa12.31□□□□□ -0.44
HOXA2-201ENST00000222718 CFC1BP0CG36 223 aa12.3□□□□□ -0.44
HOXA2-201ENST00000222718 CFC1P0CG37 223 aa12.3□□□□□ -0.44
HOXA2-201ENST00000222718 TRBV6-8A0A0A6YYG3 113 aa12.3□□□□□ -0.44
HOXA2-201ENST00000222718 LYRM9A8MSI8 78 aa12.3□□□□□ -0.44
HOXA2-201ENST00000222718 COX6A2Q02221 97 aa12.3□□□□□ -0.44
HOXA2-201ENST00000222718 MUSTN1Q8IVN3 82 aa12.29□□□□□ -0.44
HOXA2-201ENST00000222718 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.28□□□□□ -0.44
HOXA2-201ENST00000222718 TRAV13-1A0A0B4J241 112 aa12.28□□□□□ -0.44
HOXA2-201ENST00000222718 IGLV5-39A0A0G2JS06 123 aa12.28□□□□□ -0.44
HOXA2-201ENST00000222718 WIPF1O43516 503 aa12.28□□□□□ -0.44
HOXA2-201ENST00000222718 TIMM17BO60830 172 aa12.28□□□□□ -0.44
HOXA2-201ENST00000222718 OCIAD2Q56VL3 154 aa12.28□□□□□ -0.44
HOXA2-201ENST00000222718 SPANXDQ9BXN6 97 aa12.28□□□□□ -0.44
HOXA2-201ENST00000222718 SPANXCQ9NY87 97 aa12.28□□□□□ -0.44
HOXA2-201ENST00000222718 PRO1854Q9UHT4 67 aa12.28□□□□□ -0.44
HOXA2-201ENST00000222718 FBN1P35555 2871 aaKnown RBP12.28□□□□□ -0.44
HOXA2-201ENST00000222718 A4D1N5 150 aa12.27□□□□□ -0.44
HOXA2-201ENST00000222718 TSPAN13O95857 204 aa12.27□□□□□ -0.44
HOXA2-201ENST00000222718 LYRM7Q5U5X0 104 aa12.27□□□□□ -0.44
HOXA2-201ENST00000222718 LITAFQ99732 161 aa12.27□□□□□ -0.44
HOXA2-201ENST00000222718 NDUFA1O15239 70 aa12.27□□□□□ -0.45
HOXA2-201ENST00000222718 A0A0B4J2C4 111 aa12.26□□□□□ -0.45
HOXA2-201ENST00000222718 F8W1H4 67 aa12.26□□□□□ -0.45
HOXA2-201ENST00000222718 PRO0255Q9UI72 69 aa12.26□□□□□ -0.45
HOXA2-201ENST00000222718 FBN3Q75N90 2809 aa12.26□□□□□ -0.45
HOXA2-201ENST00000222718 A8MZ25 164 aa12.25□□□□□ -0.45
HOXA2-201ENST00000222718 K7ERU9 68 aa12.25□□□□□ -0.45
HOXA2-201ENST00000222718 FAM222AQ5U5X8 452 aa12.25□□□□□ -0.45
HOXA2-201ENST00000222718 GAGE6Q13070 117 aa12.24□□□□□ -0.45
HOXA2-201ENST00000222718 CIRBPQ14011 172 aaKnown RBP12.24□□□□□ -0.45
HOXA2-201ENST00000222718 MIAQ16674 131 aa12.24□□□□□ -0.45
HOXA2-201ENST00000222718 ATP6V0E2Q8NHE4 81 aa12.24□□□□□ -0.45
HOXA2-201ENST00000222718 CHCHD5Q9BSY4 110 aa12.24□□□□□ -0.45
HOXA2-201ENST00000222718 SMIM1B2RUZ4 78 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms