RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 PLAC8L1A1L4L8 177 aa12.97□□□□□ -0.33
USP18-201ENST00000215794 CSNK1G2-AS1Q8NCQ2 148 aa12.97□□□□□ -0.33
USP18-201ENST00000215794 WFDC9Q8NEX5 89 aa12.97□□□□□ -0.33
USP18-201ENST00000215794 DNAJC30Q96LL9 226 aa12.97□□□□□ -0.33
USP18-201ENST00000215794 PYGO1Q9Y3Y4 419 aa12.97□□□□□ -0.33
USP18-201ENST00000215794 ZNF22P17026 224 aaPredicted RBP12.95□□□□□ -0.34
USP18-201ENST00000215794 C9orf66Q5T8R8 295 aa12.95□□□□□ -0.34
USP18-201ENST00000215794 SCGB1D4Q6XE38 83 aa12.95□□□□□ -0.34
USP18-201ENST00000215794 UBE2D4Q9Y2X8 147 aa12.95□□□□□ -0.34
USP18-201ENST00000215794 IGHV3-64A0A075B6Q5 118 aa12.95□□□□□ -0.34
USP18-201ENST00000215794 AMELXQ99217 191 aa12.95□□□□□ -0.34
USP18-201ENST00000215794 TEX48A0A1B0GUV7 120 aa12.94□□□□□ -0.34
USP18-201ENST00000215794 TMEM223A0PJW6 202 aa12.94□□□□□ -0.34
USP18-201ENST00000215794 TRAV4A0A0B4J268 109 aa12.93□□□□□ -0.34
USP18-201ENST00000215794 C16orf74Q96GX8 76 aa12.93□□□□□ -0.34
USP18-201ENST00000215794 K7EQD1 137 aa12.92□□□□□ -0.34
USP18-201ENST00000215794 Q6ZUT4 128 aa12.92□□□□□ -0.34
USP18-201ENST00000215794 GAGE12HA6NDE8 117 aa12.92□□□□□ -0.34
USP18-201ENST00000215794 J3QQQ9 107 aa12.92□□□□□ -0.34
USP18-201ENST00000215794 GAGE7O76087 117 aa12.92□□□□□ -0.34
USP18-201ENST00000215794 GAGE12FP0CL80 117 aa12.92□□□□□ -0.34
USP18-201ENST00000215794 GAGE12GP0CL81 117 aa12.92□□□□□ -0.34
USP18-201ENST00000215794 GAGE12IP0CL82 117 aa12.92□□□□□ -0.34
USP18-201ENST00000215794 DAZ2Q13117 558 aaKnown RBP12.92□□□□□ -0.34
USP18-201ENST00000215794 SLC25A29Q8N8R3 303 aa12.92□□□□□ -0.34
USP18-201ENST00000215794 C1QTNF4Q9BXJ3 329 aa12.91□□□□□ -0.34
USP18-201ENST00000215794 A0A0J9YY99 117 aa12.91□□□□□ -0.34
USP18-201ENST00000215794 IGLL5B9A064 214 aa12.91□□□□□ -0.34
USP18-201ENST00000215794 C12orf74Q32Q52 190 aa12.91□□□□□ -0.34
USP18-201ENST00000215794 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
USP18-201ENST00000215794 SPANXA1Q9NS26 97 aa12.91□□□□□ -0.34
USP18-201ENST00000215794 RRN3P1Q2M238 152 aa12.9□□□□□ -0.34
USP18-201ENST00000215794 SPANXB1Q9NS25 103 aaPredicted RBP12.9□□□□□ -0.34
USP18-201ENST00000215794 NOTCH1P46531 2555 aa12.9□□□□□ -0.34
USP18-201ENST00000215794 GAGE12JA6NER3 117 aa12.89□□□□□ -0.35
USP18-201ENST00000215794 LGALS3P17931 250 aaKnown RBP12.89□□□□□ -0.35
USP18-201ENST00000215794 INSL3P51460 131 aa12.89□□□□□ -0.35
USP18-201ENST00000215794 MRPS36P82909 103 aaKnown RBP12.89□□□□□ -0.35
USP18-201ENST00000215794 GAGE4Q13068 117 aa12.89□□□□□ -0.35
USP18-201ENST00000215794 GAGE5Q13069 117 aa12.89□□□□□ -0.35
USP18-201ENST00000215794 GAGE13Q4V321 117 aa12.89□□□□□ -0.35
USP18-201ENST00000215794 TRGV2A0A075B6R0 118 aa12.89□□□□□ -0.35
USP18-201ENST00000215794 LEPROTO15243 131 aa12.89□□□□□ -0.35
USP18-201ENST00000215794 MGAM2Q2M2H8 2515 aa12.88□□□□□ -0.35
USP18-201ENST00000215794 RPL36AP83881 106 aaKnown RBP12.88□□□□□ -0.35
USP18-201ENST00000215794 SRSF9Q13242 221 aaKnown RBP eCLIP12.88□□□□□ -0.35
USP18-201ENST00000215794 RPL36ALQ969Q0 106 aaKnown RBP12.88□□□□□ -0.35
USP18-201ENST00000215794 LINC00694P0DN24 101 aa12.88□□□□□ -0.35
USP18-201ENST00000215794 KRTAP10-11P60412 298 aa12.88□□□□□ -0.35
USP18-201ENST00000215794 NTM-AS1Q6ZSK4 140 aa12.88□□□□□ -0.35
USP18-201ENST00000215794 MTURNQ8N3F0 131 aa12.88□□□□□ -0.35
USP18-201ENST00000215794 TRBV10-1A0A0K0K1A3 114 aa12.87□□□□□ -0.35
USP18-201ENST00000215794 LOC100131303A0A0U1RQF7 123 aa12.87□□□□□ -0.35
USP18-201ENST00000215794 CRYBA4P53673 196 aa12.87□□□□□ -0.35
USP18-201ENST00000215794 TRAV8-3A0A0A6YYJ7 113 aa12.86□□□□□ -0.35
USP18-201ENST00000215794 OVOL2Q9BRP0 275 aa12.86□□□□□ -0.35
USP18-201ENST00000215794 GTSF1LQ9H1H1 148 aa12.86□□□□□ -0.35
USP18-201ENST00000215794 DNAH3Q8TD57 4116 aa12.86□□□□□ -0.35
USP18-201ENST00000215794 UBE2D3P61077 147 aa12.86□□□□□ -0.35
USP18-201ENST00000215794 UBE2D2P62837 147 aa12.86□□□□□ -0.35
USP18-201ENST00000215794 NBEAL1Q6ZS30 2694 aa12.85□□□□□ -0.35
USP18-201ENST00000215794 A0A1B0GWB2 263 aa12.85□□□□□ -0.35
USP18-201ENST00000215794 PRB2P02812 416 aaPredicted RBP12.84□□□□□ -0.35
USP18-201ENST00000215794 IGHV3-30-3P0DP02 117 aa12.84□□□□□ -0.35
USP18-201ENST00000215794 SMAGPQ0VAQ4 97 aa12.84□□□□□ -0.35
USP18-201ENST00000215794 WFDC2Q14508 124 aa12.84□□□□□ -0.35
USP18-201ENST00000215794 TINCRA0A1B0GVN0 87 aa12.83□□□□□ -0.35
USP18-201ENST00000215794 DAZ4Q86SG3 579 aaKnown RBP12.83□□□□□ -0.35
USP18-201ENST00000215794 TIMM21Q9BVV7 248 aa12.83□□□□□ -0.35
USP18-201ENST00000215794 DAZ3Q9NR90 486 aaKnown RBP12.83□□□□□ -0.35
USP18-201ENST00000215794 A8MZ25 164 aa12.83□□□□□ -0.36
USP18-201ENST00000215794 UBE2D1P51668 147 aa12.83□□□□□ -0.36
USP18-201ENST00000215794 ATP6V0E2Q8NHE4 81 aa12.83□□□□□ -0.36
USP18-201ENST00000215794 WIPF1O43516 503 aa12.82□□□□□ -0.36
USP18-201ENST00000215794 IGHV3-30P01768 117 aa12.82□□□□□ -0.36
USP18-201ENST00000215794 SPINK8P0C7L1 97 aa12.82□□□□□ -0.36
USP18-201ENST00000215794 IGHV3-30-5P0DP03 117 aa12.82□□□□□ -0.36
USP18-201ENST00000215794 DGAT2L7PQ6IED9 249 aa12.82□□□□□ -0.36
USP18-201ENST00000215794 C10orf126Q8N4M7 172 aa12.82□□□□□ -0.36
USP18-201ENST00000215794 TRGV4A0A0C4DH28 118 aa12.81□□□□□ -0.36
USP18-201ENST00000215794 SBSPONQ8IVN8 264 aa12.81□□□□□ -0.36
USP18-201ENST00000215794 IGHV1-58A0A0C4DH39 117 aa12.8□□□□□ -0.36
USP18-201ENST00000215794 FHL2Q14192 279 aa12.8□□□□□ -0.36
USP18-201ENST00000215794 TRBV6-4A0A1B0GX49 114 aa12.79□□□□□ -0.36
USP18-201ENST00000215794 H3BMG7 143 aa12.79□□□□□ -0.36
USP18-201ENST00000215794 DEFB130BP0DP73 79 aa12.79□□□□□ -0.36
USP18-201ENST00000215794 DEFB130AP0DP74 79 aa12.79□□□□□ -0.36
USP18-201ENST00000215794 COX6A2Q02221 97 aa12.79□□□□□ -0.36
USP18-201ENST00000215794 GEMIN7Q9H840 131 aaKnown RBP12.79□□□□□ -0.36
USP18-201ENST00000215794 PGPEP1Q9NXJ5 209 aa12.79□□□□□ -0.36
USP18-201ENST00000215794 CDKN2A-AS1Q9UH64 79 aa12.79□□□□□ -0.36
USP18-201ENST00000215794 NBEAL2Q6ZNJ1 2754 aa12.79□□□□□ -0.36
USP18-201ENST00000215794 APOMO95445 188 aa12.79□□□□□ -0.36
USP18-201ENST00000215794 ETDBQ3ZM63 59 aa12.79□□□□□ -0.36
USP18-201ENST00000215794 PRO0461Q9UI25 63 aa12.79□□□□□ -0.36
USP18-201ENST00000215794 X6R8D5 127 aa12.79□□□□□ -0.36
USP18-201ENST00000215794 A0A0J9YXY3 114 aa12.78□□□□□ -0.36
USP18-201ENST00000215794 LYRM7Q5U5X0 104 aa12.78□□□□□ -0.36
USP18-201ENST00000215794 VSIG2Q96IQ7 327 aa12.78□□□□□ -0.36
USP18-201ENST00000215794 CKS1BP61024 79 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms