RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 MT-ATP8P03928 68 aa17.17■□□□□ 0.34
TARBP1-201ENST00000040877 TCL1BO95988 128 aa17.16■□□□□ 0.34
TARBP1-201ENST00000040877 NDUFA7O95182 113 aa17.16■□□□□ 0.34
TARBP1-201ENST00000040877 PIK3CD-AS1Q5SR53 167 aa17.16■□□□□ 0.34
TARBP1-201ENST00000040877 SPANXB1Q9NS25 103 aaPredicted RBP17.15■□□□□ 0.34
TARBP1-201ENST00000040877 IGKV2-24A0A0C4DH68 120 aa17.15■□□□□ 0.34
TARBP1-201ENST00000040877 CDSNQ15517 529 aa17.14■□□□□ 0.33
TARBP1-201ENST00000040877 RNASE3P12724 160 aaKnown RBP17.13■□□□□ 0.33
TARBP1-201ENST00000040877 KIAA1549Q9HCM3 1950 aa17.13■□□□□ 0.33
TARBP1-201ENST00000040877 TNRC6BQ9UPQ9 1833 aaKnown RBP17.13■□□□□ 0.33
TARBP1-201ENST00000040877 NDUFV3P56181 108 aaKnown RBP17.12■□□□□ 0.33
TARBP1-201ENST00000040877 PIEZO2Q9H5I5 2752 aa17.12■□□□□ 0.33
TARBP1-201ENST00000040877 DCANP1Q8TF63 244 aa17.12■□□□□ 0.33
TARBP1-201ENST00000040877 TLN1Q9Y490 2541 aaKnown RBP17.11■□□□□ 0.33
TARBP1-201ENST00000040877 MRGPRG-AS1Q2M3A8 158 aa17.11■□□□□ 0.33
TARBP1-201ENST00000040877 C9orf85Q96MD7 179 aa17.11■□□□□ 0.33
TARBP1-201ENST00000040877 FAM110AQ9BQ89 295 aa17.11■□□□□ 0.33
TARBP1-201ENST00000040877 CRIP2P52943 208 aaPredicted RBP17.1■□□□□ 0.33
TARBP1-201ENST00000040877 NDUFC2O95298 119 aa17.1■□□□□ 0.33
TARBP1-201ENST00000040877 LINC00643Q86TS7 51 aa17.09■□□□□ 0.33
TARBP1-201ENST00000040877 BBC3Q96PG8 261 aaPredicted RBP17.09■□□□□ 0.33
TARBP1-201ENST00000040877 COL5A1P20908 1838 aaPredicted RBP17.09■□□□□ 0.33
TARBP1-201ENST00000040877 LINC00308Q8TCZ7 52 aa17.08■□□□□ 0.32
TARBP1-201ENST00000040877 Q6ZS46 218 aa17.08■□□□□ 0.32
TARBP1-201ENST00000040877 ABCA2Q9BZC7 2435 aa17.08■□□□□ 0.32
TARBP1-201ENST00000040877 SYCNQ0VAF6 134 aa17.07■□□□□ 0.32
TARBP1-201ENST00000040877 PLXNB1O43157 2135 aa17.07■□□□□ 0.32
TARBP1-201ENST00000040877 PTPRSQ13332 1948 aa17.07■□□□□ 0.32
TARBP1-201ENST00000040877 HIGD2AQ9BW72 106 aa17.07■□□□□ 0.32
TARBP1-201ENST00000040877 LELP1Q5T871 98 aa17.06■□□□□ 0.32
TARBP1-201ENST00000040877 MYO9AB2RTY4 2548 aa17.06■□□□□ 0.32
TARBP1-201ENST00000040877 CD164L2Q6UWJ8 174 aa17.06■□□□□ 0.32
TARBP1-201ENST00000040877 NRACQ8N912 160 aa17.06■□□□□ 0.32
TARBP1-201ENST00000040877 TIMM17BO60830 172 aa17.06■□□□□ 0.32
TARBP1-201ENST00000040877 AVPP01185 164 aa17.06■□□□□ 0.32
TARBP1-201ENST00000040877 TSHBP01222 138 aa17.06■□□□□ 0.32
TARBP1-201ENST00000040877 ZNF580Q9UK33 172 aa17.05■□□□□ 0.32
TARBP1-201ENST00000040877 MRPS36P82909 103 aaKnown RBP17.05■□□□□ 0.32
TARBP1-201ENST00000040877 PRR9Q5T870 116 aa17.05■□□□□ 0.32
TARBP1-201ENST00000040877 PROK1P58294 105 aa17.05■□□□□ 0.32
TARBP1-201ENST00000040877 BRI3O95415 125 aa17.05■□□□□ 0.32
TARBP1-201ENST00000040877 Q8N976 141 aa17.05■□□□□ 0.32
TARBP1-201ENST00000040877 C18orf65Q6ZTR6 163 aa17.04■□□□□ 0.32
TARBP1-201ENST00000040877 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.04■□□□□ 0.32
TARBP1-201ENST00000040877 C11orf21Q9P2W6 132 aa17.04■□□□□ 0.32
TARBP1-201ENST00000040877 POLR2KP53803 58 aaKnown RBP17.04■□□□□ 0.32
TARBP1-201ENST00000040877 CNFNQ9BYD5 112 aa17.04■□□□□ 0.32
TARBP1-201ENST00000040877 C5orf47Q569G3 176 aa17.03■□□□□ 0.32
TARBP1-201ENST00000040877 KPRPQ5T749 579 aaPredicted RBP17.02■□□□□ 0.32
TARBP1-201ENST00000040877 HCFC1P51610 2035 aa17.02■□□□□ 0.32
TARBP1-201ENST00000040877 TEX49A0A1B0GTD5 131 aa17.01■□□□□ 0.31
TARBP1-201ENST00000040877 CHKB-CPT1BH3BT56 60 aa17.01■□□□□ 0.31
TARBP1-201ENST00000040877 C14orf132Q9NPU4 83 aa17.01■□□□□ 0.31
TARBP1-201ENST00000040877 IGKV2D-26A0A0A0MRZ7 120 aa17■□□□□ 0.31
TARBP1-201ENST00000040877 FAM19A1Q7Z5A9 133 aa17■□□□□ 0.31
TARBP1-201ENST00000040877 DSCAML1Q8TD84 2053 aa17■□□□□ 0.31
TARBP1-201ENST00000040877 C2CD3Q4AC94 2353 aa16.99■□□□□ 0.31
TARBP1-201ENST00000040877 A0A087WZ39 114 aa16.98■□□□□ 0.31
TARBP1-201ENST00000040877 H0Y9J4 135 aa16.98■□□□□ 0.31
TARBP1-201ENST00000040877 MUC7Q8TAX7 377 aa16.98■□□□□ 0.31
TARBP1-201ENST00000040877 PRRC2AP48634 2157 aaKnown RBP16.98■□□□□ 0.31
TARBP1-201ENST00000040877 BPY2O14599 106 aa16.98■□□□□ 0.31
TARBP1-201ENST00000040877 UQCRQO14949 82 aa16.98■□□□□ 0.31
TARBP1-201ENST00000040877 WFDC10AQ9H1F0 79 aa16.98■□□□□ 0.31
TARBP1-201ENST00000040877 UBE2D4Q9Y2X8 147 aa16.98■□□□□ 0.31
TARBP1-201ENST00000040877 TRBV30A0A0K0K1B3 111 aa16.97■□□□□ 0.31
TARBP1-201ENST00000040877 MAPKAPK5-AS1Q8N8E1 139 aa16.96■□□□□ 0.31
TARBP1-201ENST00000040877 MRPS12O15235 138 aaKnown RBP16.96■□□□□ 0.31
TARBP1-201ENST00000040877 XAGE1AQ9HD64 81 aa16.95■□□□□ 0.3
TARBP1-201ENST00000040877 LINC00959A0A1B0GUT2 108 aa16.95■□□□□ 0.3
TARBP1-201ENST00000040877 UBE2D3P61077 147 aa16.94■□□□□ 0.3
TARBP1-201ENST00000040877 UBE2D2P62837 147 aa16.94■□□□□ 0.3
TARBP1-201ENST00000040877 KRTAP10-9P60411 292 aa16.94■□□□□ 0.3
TARBP1-201ENST00000040877 ODF3L2Q3SX64 289 aa16.94■□□□□ 0.3
TARBP1-201ENST00000040877 C2orf91Q6ZV80 131 aa16.94■□□□□ 0.3
TARBP1-201ENST00000040877 WFDC9Q8NEX5 89 aa16.94■□□□□ 0.3
TARBP1-201ENST00000040877 IGLV4-69A0A075B6H9 119 aa16.93■□□□□ 0.3
TARBP1-201ENST00000040877 PRB2P02812 416 aaPredicted RBP16.93■□□□□ 0.3
TARBP1-201ENST00000040877 ATG2AQ2TAZ0 1938 aa16.93■□□□□ 0.3
TARBP1-201ENST00000040877 ATP5EP2Q5VTU8 51 aa16.92■□□□□ 0.3
TARBP1-201ENST00000040877 IGLV1-51P01701 117 aa16.92■□□□□ 0.3
TARBP1-201ENST00000040877 C7orf33Q8WU49 177 aa16.92■□□□□ 0.3
TARBP1-201ENST00000040877 IGHV4-30-4P0DP06 118 aa16.91■□□□□ 0.3
TARBP1-201ENST00000040877 C16orf95Q9H693 158 aa16.91■□□□□ 0.3
TARBP1-201ENST00000040877 FAM19A5Q7Z5A7 132 aaPredicted RBP16.91■□□□□ 0.3
TARBP1-201ENST00000040877 TRAV23DV6A0A075B6W5 121 aa16.9■□□□□ 0.3
TARBP1-201ENST00000040877 BRK1Q8WUW1 75 aa16.9■□□□□ 0.3
TARBP1-201ENST00000040877 UBE2D1P51668 147 aa16.9■□□□□ 0.3
TARBP1-201ENST00000040877 COX17Q14061 63 aa16.9■□□□□ 0.3
TARBP1-201ENST00000040877 C6orf99Q4VX62 202 aa16.9■□□□□ 0.3
TARBP1-201ENST00000040877 M0R378 163 aa16.89■□□□□ 0.3
TARBP1-201ENST00000040877 CHCHD7Q9BUK0 85 aa16.89■□□□□ 0.3
TARBP1-201ENST00000040877 TRIAP1O43715 76 aa16.89■□□□□ 0.29
TARBP1-201ENST00000040877 LOC100131303A0A0U1RQF7 123 aa16.89■□□□□ 0.29
TARBP1-201ENST00000040877 A0A1W2PPR1 153 aa16.88■□□□□ 0.29
TARBP1-201ENST00000040877 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.88■□□□□ 0.29
TARBP1-201ENST00000040877 TANC2Q9HCD6 1990 aa16.88■□□□□ 0.29
TARBP1-201ENST00000040877 CLUHP3Q96NS8 147 aa16.88■□□□□ 0.29
TARBP1-201ENST00000040877 C3orf22Q8N5N4 141 aa16.87■□□□□ 0.29
TARBP1-201ENST00000040877 SDIM1Q6ZPB5 146 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms