RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Tex54G3UW99 86 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Lcn2P11672 200 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 B230104I21RikQ3USW4 141 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 GlmpQ9JHJ3 404 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Q149G0 166 aaKnown RBP10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Klf2Q60843 354 aaKnown RBP10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Ormdl2Q9CQZ0 153 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Pilrb2Q2YFS1 225 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Trav6d-5A0A075B6B9 112 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 P01783 136 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Cxcl10P17515 98 aa10.06□□□□□ -0.8
Trim56-201ENSMUST00000054384 Tmem131O70472 1877 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 Phxr1P15973 60 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gm14548E9Q1Z6 680 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 Znf146Q8BQN6 292 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 Vmn1r197Q8R265 298 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 Trav14n-3A0A075B645 120 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 Srp19Q9D7A6 144 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 Zfp977L7N2E7 438 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gm904Q3V2L5 102 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 Slc25a28Q8R0Z5 364 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gm29666A0A087WQ99 126 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 Tmem136Q3TYE7 245 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 Scrt1Q99M85 348 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 St6galnac3Q9WUV2 305 aa10.05□□□□□ -0.8
Trim56-201ENSMUST00000054384 LtaP09225 202 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Tmprss12Q3V0Q7 336 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 MavsQ8VCF0 503 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 MNCb-2875Q9DCB3 74 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Anapc1P53995 1944 aaKnown RBP10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Trbv1A0A0B4J1G7 116 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Tnfsf11O35235 316 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Mrps36Q9CQX8 102 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Saa3P04918 122 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Fam168aQ8BGZ2 244 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Ndufb8Q9D6J5 186 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gm27021M0QWE2 156 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gng5Q80SZ7 68 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Olfr1195Q8VG21 308 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 StrcQ8VIM6 1809 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 GchfrP99025 84 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Olfr433Q7TRV9 314 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Cd200r1Q9ES57 326 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Il3raP26952 396 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Thap8E9Q695 213 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Mrpl51Q9CPY1 128 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Olfr1258Q8VGN6 311 aa10.04□□□□□ -0.8
Trim56-201ENSMUST00000054384 Hbb-b2P02089 147 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Mllt11P97783 90 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Dtx2Q8R3P2 619 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 9330161L09RikQ9D253 136 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Fam89bQ9QUI1 189 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Pglyrp3A1A547 347 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Igkv4-70A0A0B4J1I5 116 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Cnot1Q6ZQ08 2375 aaKnown RBP10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Tmem255bQ5FW56 369 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Foxg1Q60987 481 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Fam53bQ8BGR5 422 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Trav4-2A0A075B638 110 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Mrpl14Q9D1I6 145 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Klk1b27Q9JM71 263 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Opn3Q9WUK7 400 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 OdamA1E960 273 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Saxo2Q8BQB6 394 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 3100002H09RikQ9CXW6 140 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Prss8Q9ESD1 342 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Tanc1Q0VGY8 1856 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Tcrg-V6A0A075B5Y8 134 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gm20458E9PXJ7 78 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Shisal1Q0VBP7 198 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 PinlypQ9CQD7 212 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Sec11aQ9R0P6 179 aa10.03□□□□□ -0.8
Trim56-201ENSMUST00000054384 Tmem238A9JSM3 176 aa10.02□□□□□ -0.8
Trim56-201ENSMUST00000054384 Ifitm5O88728 134 aa10.02□□□□□ -0.8
Trim56-201ENSMUST00000054384 Atp5iQ06185 71 aaKnown RBP10.02□□□□□ -0.8
Trim56-201ENSMUST00000054384 Gm13090A2A899 111 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Prss33Q80WM7 277 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Rspo4Q8BJ73 228 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Ighv1-47A0A0A6YY41 117 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 TcraP01849 138 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Defb33Q30KN3 62 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Nhlrc3Q8CCH2 347 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Atg2aQ6P4T0 1914 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 P01667 111 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Rpl23P62830 140 aaKnown RBP10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Klk7Q91VE3 249 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Nat6Q9R123 314 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Znf385cA2A5E6 429 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Atp5g2P56383 146 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Lrcol1Q3URS3 161 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Tmem170aQ9D342 144 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Zfpl1Q9DB43 310 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 AsmtD3KU66 387 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 Tmem241Q3UME2 297 aa10.02□□□□□ -0.81
Trim56-201ENSMUST00000054384 H2al2bA9Z055 111 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 LipiF6YQT7 476 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Cldn23Q9D7D7 296 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Pglyrp4Q0VB07 374 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 CklfQ9DAS1 152 aa10.01□□□□□ -0.81
Trim56-201ENSMUST00000054384 Trav7n-4A0A075B620 113 aa10.01□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms