RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W DBP10Q12389 995 aaKnown RBP5.58□□□□□ -1.52
VPS28YPL065W VAS1P07806 1104 aaKnown RBP5.57□□□□□ -1.52
VPS28YPL065W SSP120P39931 234 aaKnown RBP5.57□□□□□ -1.52
VPS28YPL065W MDR1P53258 950 aa5.57□□□□□ -1.52
VPS28YPL065W CPR8P53728 308 aa5.57□□□□□ -1.52
VPS28YPL065W HLR1Q04429 423 aa5.57□□□□□ -1.52
VPS28YPL065W ARP7Q12406 477 aa5.57□□□□□ -1.52
VPS28YPL065W PET309P32522 965 aaPredicted RBP5.56□□□□□ -1.52
VPS28YPL065W HOT13P36078 116 aa5.56□□□□□ -1.52
VPS28YPL065W PIH1P38768 344 aa5.56□□□□□ -1.52
VPS28YPL065W SWD1P39706 426 aa5.56□□□□□ -1.52
VPS28YPL065W MAD3P47074 515 aa5.56□□□□□ -1.52
VPS28YPL065W TEP1P53916 434 aa5.56□□□□□ -1.52
VPS28YPL065W ARG7Q04728 441 aa5.56□□□□□ -1.52
VPS28YPL065W ORM2Q06144 216 aa5.56□□□□□ -1.52
VPS28YPL065W BRE1Q07457 700 aaKnown RBP5.56□□□□□ -1.52
VPS28YPL065W HOS1Q12214 470 aa5.56□□□□□ -1.52
VPS28YPL065W RGT2Q12300 763 aa5.56□□□□□ -1.52
VPS28YPL065W VPS24P36095 224 aaKnown RBP5.55□□□□□ -1.52
VPS28YPL065W FUI1P38196 639 aa5.55□□□□□ -1.52
VPS28YPL065W YGL117WP53133 265 aa5.55□□□□□ -1.52
VPS28YPL065W YGR054WP53235 642 aaKnown RBP5.55□□□□□ -1.52
VPS28YPL065W ATG16Q03818 150 aa5.55□□□□□ -1.52
VPS28YPL065W IRC3Q06683 689 aa5.55□□□□□ -1.52
VPS28YPL065W PCK1P10963 549 aa5.54□□□□□ -1.52
VPS28YPL065W SEC18P18759 758 aaKnown RBP5.54□□□□□ -1.52
VPS28YPL065W PWP2P25635 923 aaKnown RBP5.54□□□□□ -1.52
VPS28YPL065W CEF1Q03654 590 aaPredicted RBP5.54□□□□□ -1.52
VPS28YPL065W AI5_ALPHAQ9ZZX1 630 aa5.54□□□□□ -1.52
VPS28YPL065W STE4P18851 423 aa5.53□□□□□ -1.52
VPS28YPL065W AAD3P25612 363 aa5.53□□□□□ -1.52
VPS28YPL065W PPE1P38796 400 aa5.53□□□□□ -1.52
VPS28YPL065W IES5P40060 125 aa5.53□□□□□ -1.52
VPS28YPL065W LRO1P40345 661 aa5.53□□□□□ -1.52
VPS28YPL065W ULP2P40537 1034 aaPredicted RBP5.53□□□□□ -1.52
VPS28YPL065W ACS1Q01574 713 aa5.53□□□□□ -1.52
VPS28YPL065W TRS23Q03784 219 aa5.53□□□□□ -1.52
VPS28YPL065W ARR3Q06598 404 aa5.53□□□□□ -1.52
VPS28YPL065W MBR1P23493 339 aa5.52□□□□□ -1.53
VPS28YPL065W TAF5P38129 798 aa5.52□□□□□ -1.53
VPS28YPL065W APM3P38153 483 aa5.52□□□□□ -1.53
VPS28YPL065W YEL025CP39991 1188 aa5.52□□□□□ -1.53
VPS28YPL065W TRI1Q05024 226 aa5.52□□□□□ -1.53
VPS28YPL065W TUF1P02992 437 aaKnown RBP5.51□□□□□ -1.53
VPS28YPL065W PHO81P17442 1178 aa5.51□□□□□ -1.53
VPS28YPL065W VPS33P20795 691 aa5.51□□□□□ -1.53
VPS28YPL065W MSH1P25846 959 aa5.51□□□□□ -1.53
VPS28YPL065W MRPL7P36519 292 aa5.51□□□□□ -1.53
VPS28YPL065W ACA1P39970 489 aa5.51□□□□□ -1.53
VPS28YPL065W RPT2P40327 437 aaKnown RBP5.51□□□□□ -1.53
VPS28YPL065W GSM1P42950 618 aa5.51□□□□□ -1.53
VPS28YPL065W MPS1P54199 764 aa5.51□□□□□ -1.53
VPS28YPL065W VMS1Q04311 632 aaKnown RBP5.51□□□□□ -1.53
VPS28YPL065W ZPS1Q12512 249 aa5.51□□□□□ -1.53
VPS28YPL065W TRX2P22803 104 aaKnown RBP5.5□□□□□ -1.53
VPS28YPL065W STB5P38699 743 aa5.5□□□□□ -1.53
VPS28YPL065W YJL193WP39542 402 aa5.5□□□□□ -1.53
VPS28YPL065W SPC72P39723 622 aa5.5□□□□□ -1.53
VPS28YPL065W PSA1P41940 361 aaKnown RBP5.5□□□□□ -1.53
VPS28YPL065W EFR3Q03653 782 aaKnown RBP5.5□□□□□ -1.53
VPS28YPL065W YDL073WQ07454 984 aa5.5□□□□□ -1.53
VPS28YPL065W DBF20P32328 564 aa5.49□□□□□ -1.53
VPS28YPL065W STT3P39007 718 aaKnown RBP5.49□□□□□ -1.53
VPS28YPL065W VPS27P40343 622 aaKnown RBP5.49□□□□□ -1.53
VPS28YPL065W YGR021WP53212 290 aa5.49□□□□□ -1.53
VPS28YPL065W PAP2P53632 584 aaKnown RBP5.49□□□□□ -1.53
VPS28YPL065W SEC12P11655 471 aa5.48□□□□□ -1.53
VPS28YPL065W PMA2P19657 947 aa5.48□□□□□ -1.53
VPS28YPL065W YLF2P38746 405 aa5.48□□□□□ -1.53
VPS28YPL065W ERR3P42222 437 aa5.48□□□□□ -1.53
VPS28YPL065W STP1Q00947 519 aa5.48□□□□□ -1.53
VPS28YPL065W MFM1Q02783 413 aa5.48□□□□□ -1.53
VPS28YPL065W AAD4Q07747 329 aa5.48□□□□□ -1.53
VPS28YPL065W YPL216WQ08964 1102 aa5.48□□□□□ -1.53
VPS28YPL065W DSS4P32601 143 aa5.47□□□□□ -1.53
VPS28YPL065W DHR2P36009 735 aaPredicted RBP5.47□□□□□ -1.53
VPS28YPL065W YIP4P53093 235 aa5.47□□□□□ -1.53
VPS28YPL065W CIA1Q05583 330 aa5.47□□□□□ -1.53
VPS28YPL065W ENT2Q05785 613 aa5.47□□□□□ -1.53
VPS28YPL065W YMR084WA2P2R3 262 aa5.46□□□□□ -1.54
VPS28YPL065W TOP1P04786 769 aa5.46□□□□□ -1.54
VPS28YPL065W HEM1P09950 548 aaPredicted RBP5.46□□□□□ -1.54
VPS28YPL065W MCM3P24279 971 aaKnown RBP5.46□□□□□ -1.54
VPS28YPL065W MRS6P32864 603 aaKnown RBP5.46□□□□□ -1.54
VPS28YPL065W PTH2P34222 208 aa5.46□□□□□ -1.54
VPS28YPL065W APD1P38281 316 aa5.46□□□□□ -1.54
VPS28YPL065W SCS3P53012 380 aa5.46□□□□□ -1.54
VPS28YPL065W CPA2P03965 1118 aaKnown RBP5.45□□□□□ -1.54
VPS28YPL065W RPL7AP05737 244 aaKnown RBP5.45□□□□□ -1.54
VPS28YPL065W POL3P15436 1097 aa5.45□□□□□ -1.54
VPS28YPL065W MSM1P22438 575 aa5.45□□□□□ -1.54
VPS28YPL065W SWI4P25302 1093 aaKnown RBP5.45□□□□□ -1.54
VPS28YPL065W RPS7AP26786 190 aaKnown RBP5.45□□□□□ -1.54
VPS28YPL065W MRPL9P31334 269 aa5.45□□□□□ -1.54
VPS28YPL065W VFA1P40080 203 aa5.45□□□□□ -1.54
VPS28YPL065W POL31P46957 487 aa5.45□□□□□ -1.54
VPS28YPL065W COS12P53053 380 aa5.45□□□□□ -1.54
VPS28YPL065W COQ6P53318 479 aa5.45□□□□□ -1.54
VPS28YPL065W ATP23P53722 227 aa5.45□□□□□ -1.54
VPS28YPL065W TRS31Q03337 283 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 87.1 ms