RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeast

Gene DDI3, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DDI3	YNL335W	SIR1	P21691	654 aa		4.93	□□□□□ -1.62
DDI3	YNL335W	RPS7A	P26786	190 aa	Known RBP	4.93	□□□□□ -1.62
DDI3	YNL335W	PRP45	P28004	379 aa	Predicted RBP	4.93	□□□□□ -1.62
DDI3	YNL335W	TDP1	P38319	544 aa		4.93	□□□□□ -1.62
DDI3	YNL335W	MUP3	P38734	546 aa		4.93	□□□□□ -1.62
DDI3	YNL335W	RPS15	Q01855	142 aa	Known RBP	4.93	□□□□□ -1.62
DDI3	YNL335W	APA1	P16550	321 aa	Known RBP	4.92	□□□□□ -1.62
DDI3	YNL335W	MSM1	P22438	575 aa		4.92	□□□□□ -1.62
DDI3	YNL335W	MCM3	P24279	971 aa	Known RBP	4.92	□□□□□ -1.62
DDI3	YNL335W	MRS6	P32864	603 aa	Known RBP	4.92	□□□□□ -1.62
DDI3	YNL335W	SPC72	P39723	622 aa		4.92	□□□□□ -1.62
DDI3	YNL335W	MIT1	P40002	666 aa		4.92	□□□□□ -1.62
DDI3	YNL335W	FAF1	P40546	346 aa	Predicted RBP	4.92	□□□□□ -1.62
DDI3	YNL335W	ARA2	Q04212	335 aa		4.92	□□□□□ -1.62
DDI3	YNL335W	EIS1	Q05050	843 aa	Known RBP	4.92	□□□□□ -1.62
DDI3	YNL335W	IWR1	Q07532	353 aa	Predicted RBP	4.92	□□□□□ -1.62
DDI3	YNL335W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
DDI3	YNL335W	RPN13	O13563	156 aa		4.91	□□□□□ -1.62
DDI3	YNL335W	TPK2	P06245	380 aa		4.91	□□□□□ -1.62
DDI3	YNL335W	FUI1	P38196	639 aa		4.91	□□□□□ -1.62
DDI3	YNL335W	SDH8	P38345	138 aa		4.91	□□□□□ -1.62
DDI3	YNL335W	PMC1	P38929	1173 aa	Predicted RBP	4.91	□□□□□ -1.62
DDI3	YNL335W	YIL166C	P40445	542 aa		4.91	□□□□□ -1.62
DDI3	YNL335W	CAB2	P40506	365 aa		4.91	□□□□□ -1.62
DDI3	YNL335W	QRI1	P43123	477 aa	Known RBP	4.91	□□□□□ -1.62
DDI3	YNL335W	CPR6	P53691	371 aa	Known RBP	4.91	□□□□□ -1.62
DDI3	YNL335W	GFD1	Q04839	188 aa	Known RBP	4.91	□□□□□ -1.62
DDI3	YNL335W	ZPS1	Q12512	249 aa		4.91	□□□□□ -1.62
DDI3	YNL335W	STE12	P13574	688 aa		4.9	□□□□□ -1.63
DDI3	YNL335W	DPB3	P27344	201 aa		4.9	□□□□□ -1.63
DDI3	YNL335W	PRE2	P30656	287 aa	Known RBP	4.9	□□□□□ -1.63
DDI3	YNL335W	DBF20	P32328	564 aa		4.9	□□□□□ -1.63
DDI3	YNL335W	FRD1	P32614	470 aa	Known RBP	4.9	□□□□□ -1.63
DDI3	YNL335W	IES5	P40060	125 aa		4.9	□□□□□ -1.63
DDI3	YNL335W	SAP185	P40856	1058 aa		4.9	□□□□□ -1.63
DDI3	YNL335W	ASN1	P49089	572 aa	Known RBP	4.9	□□□□□ -1.63
DDI3	YNL335W	COQ6	P53318	479 aa		4.9	□□□□□ -1.63
DDI3	YNL335W	WHI2	P12611	486 aa		4.89	□□□□□ -1.63
DDI3	YNL335W	SPO11	P23179	398 aa		4.89	□□□□□ -1.63
DDI3	YNL335W	RIT1	P23796	513 aa		4.89	□□□□□ -1.63
DDI3	YNL335W	EMP70	P32802	667 aa		4.89	□□□□□ -1.63
DDI3	YNL335W	LNP1	P38878	278 aa		4.89	□□□□□ -1.63
DDI3	YNL335W	YEL020C	P39994	560 aa		4.89	□□□□□ -1.63
DDI3	YNL335W	RPT2	P40327	437 aa	Known RBP	4.89	□□□□□ -1.63
DDI3	YNL335W	YGR021W	P53212	290 aa		4.89	□□□□□ -1.63
DDI3	YNL335W	CPR8	P53728	308 aa		4.89	□□□□□ -1.63
DDI3	YNL335W	APM1	Q00776	475 aa	Predicted RBP	4.89	□□□□□ -1.63
DDI3	YNL335W	BLS1	Q06071	122 aa		4.89	□□□□□ -1.63
DDI3	YNL335W	PSR2	Q07949	397 aa		4.89	□□□□□ -1.63
DDI3	YNL335W	SPA2	P23201	1466 aa	Known RBP	4.88	□□□□□ -1.63
DDI3	YNL335W	CPA2	P03965	1118 aa	Known RBP	4.88	□□□□□ -1.63
DDI3	YNL335W	YPK1	P12688	680 aa	Known RBP	4.88	□□□□□ -1.63
DDI3	YNL335W	RPA135	P22138	1203 aa	Known RBP	4.88	□□□□□ -1.63
DDI3	YNL335W	CDC5	P32562	705 aa		4.88	□□□□□ -1.63
DDI3	YNL335W	SAP4	P53036	818 aa		4.88	□□□□□ -1.63
DDI3	YNL335W	ATG21	Q02887	496 aa		4.88	□□□□□ -1.63
DDI3	YNL335W	AIM6	Q07716	390 aa		4.88	□□□□□ -1.63
DDI3	YNL335W	CRT10	Q08226	957 aa		4.88	□□□□□ -1.63
DDI3	YNL335W	SGS1	P35187	1447 aa		4.88	□□□□□ -1.63
DDI3	YNL335W	AAC1	P04710	309 aa		4.87	□□□□□ -1.63
DDI3	YNL335W	ADE3	P07245	946 aa	Known RBP	4.87	□□□□□ -1.63
DDI3	YNL335W	RNR3	P21672	869 aa	Known RBP	4.87	□□□□□ -1.63
DDI3	YNL335W	TRX2	P22803	104 aa	Known RBP	4.87	□□□□□ -1.63
DDI3	YNL335W	CLB4	P24871	460 aa		4.87	□□□□□ -1.63
DDI3	YNL335W	SAT4	P25333	603 aa	Known RBP	4.87	□□□□□ -1.63
DDI3	YNL335W	YCR061W	P25639	631 aa		4.87	□□□□□ -1.63
DDI3	YNL335W	SWC3	P31376	625 aa		4.87	□□□□□ -1.63
DDI3	YNL335W	UGP1	P32861	499 aa	Known RBP	4.87	□□□□□ -1.63
DDI3	YNL335W	YPT10	P38146	199 aa		4.87	□□□□□ -1.63
DDI3	YNL335W	ARB1	P40024	610 aa	Known RBP	4.87	□□□□□ -1.63
DDI3	YNL335W	PUG1	P40100	303 aa		4.87	□□□□□ -1.63
DDI3	YNL335W	MRK1	P50873	501 aa		4.87	□□□□□ -1.63
DDI3	YNL335W	YGL117W	P53133	265 aa		4.87	□□□□□ -1.63
DDI3	YNL335W	ESF2	P53743	316 aa	Known RBP	4.87	□□□□□ -1.63
DDI3	YNL335W	YPL108W	Q02872	168 aa	Predicted RBP	4.87	□□□□□ -1.63
DDI3	YNL335W	CRF1	Q04930	467 aa		4.87	□□□□□ -1.63
DDI3	YNL335W	SWI4	P25302	1093 aa	Known RBP	4.86	□□□□□ -1.63
DDI3	YNL335W	MRPL9	P31334	269 aa		4.86	□□□□□ -1.63
DDI3	YNL335W	MRPL36	P36531	177 aa		4.86	□□□□□ -1.63
DDI3	YNL335W	ICL2	Q12031	575 aa		4.86	□□□□□ -1.63
DDI3	YNL335W	SUT2	Q12286	268 aa		4.86	□□□□□ -1.63
DDI3	YNL335W	FSH1	P38777	243 aa	Known RBP	4.85	□□□□□ -1.63
DDI3	YNL335W	ERR3	P42222	437 aa		4.85	□□□□□ -1.63
DDI3	YNL335W	IMA1	P53051	589 aa		4.85	□□□□□ -1.63
DDI3	YNL335W	MRPL13	Q02204	264 aa		4.85	□□□□□ -1.63
DDI3	YNL335W	GIS1	Q03833	894 aa		4.85	□□□□□ -1.63
DDI3	YNL335W	CIA1	Q05583	330 aa		4.85	□□□□□ -1.63
DDI3	YNL335W	ULA1	Q12059	462 aa		4.85	□□□□□ -1.63
DDI3	YNL335W	YER175W-A	Q8TGU4	54 aa		4.85	□□□□□ -1.63
DDI3	YNL335W	SSM4	P40318	1319 aa		4.84	□□□□□ -1.63
DDI3	YNL335W	NUC1	P08466	329 aa		4.84	□□□□□ -1.63
DDI3	YNL335W	YCL049C	P25577	312 aa		4.84	□□□□□ -1.63
DDI3	YNL335W	ADY2	P25613	283 aa		4.84	□□□□□ -1.63
DDI3	YNL335W	YBR138C	P38277	524 aa		4.84	□□□□□ -1.63
DDI3	YNL335W	MAM1	P40065	302 aa		4.84	□□□□□ -1.63
DDI3	YNL335W	PSF2	P40359	213 aa		4.84	□□□□□ -1.63
DDI3	YNL335W	TOP1	P04786	769 aa		4.83	□□□□□ -1.64
DDI3	YNL335W	RPL7A	P05737	244 aa	Known RBP	4.83	□□□□□ -1.64
DDI3	YNL335W	ADE5,7	P07244	802 aa	Known RBP	4.83	□□□□□ -1.64
DDI3	YNL335W	PET122	P10355	254 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms