RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	MRP2	P10663	115 aa	Predicted RBP	7.29	□□□□□ -1.24
MSB3	YNL293W	GFA1	P14742	717 aa	Known RBP	7.29	□□□□□ -1.24
MSB3	YNL293W	SRV2	P17555	526 aa	Known RBP	7.29	□□□□□ -1.24
MSB3	YNL293W	NTG1	P31378	399 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	MIF2	P35201	549 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	UTP30	P36144	274 aa	Known RBP	7.29	□□□□□ -1.24
MSB3	YNL293W	ERP5	P38819	212 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	BIM1	P40013	344 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	SHQ1	P40486	507 aa	Predicted RBP	7.29	□□□□□ -1.24
MSB3	YNL293W	MMM1	P41800	426 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	EPL1	P43572	832 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	TOM22	P49334	152 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	DSE4	P53753	1117 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	TAH18	Q12181	623 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	ARP7	Q12406	477 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	YOR131C	Q12486	218 aa		7.29	□□□□□ -1.24
MSB3	YNL293W	RSF2	P46974	1380 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	CCP1	P00431	361 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	MF(ALPHA)1	P01149	165 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	HMG2	P12684	1045 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	ILV6	P25605	309 aa	Known RBP	7.28	□□□□□ -1.24
MSB3	YNL293W	MCM4	P30665	933 aa	Known RBP	7.28	□□□□□ -1.24
MSB3	YNL293W	PMT2	P31382	759 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	GCG1	P32656	232 aa	Known RBP	7.28	□□□□□ -1.24
MSB3	YNL293W	SDS22	P36047	338 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	RRN3	P36070	627 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	YKL023W	P36103	277 aa	Known RBP	7.28	□□□□□ -1.24
MSB3	YNL293W	GRX7	P38068	203 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	CHK1	P38147	527 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	BCD1	P38772	366 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	LNP1	P38878	278 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	TIF11	P38912	153 aa	Known RBP	7.28	□□□□□ -1.24
MSB3	YNL293W	HPM1	P40481	377 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	IRC6	P43615	237 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	COX16	P47081	118 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	ABM1	P47146	123 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	MNT2	P53059	558 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	DBP6	P53734	629 aa	Known RBP	7.28	□□□□□ -1.24
MSB3	YNL293W	MNT4	P53745	580 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	KAP120	Q02932	1032 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	SSY1	Q03770	852 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	ARP10	Q04549	284 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	RBS1	Q05672	457 aa	Known RBP	7.28	□□□□□ -1.24
MSB3	YNL293W	HCR1	Q05775	265 aa	Known RBP	7.28	□□□□□ -1.24
MSB3	YNL293W	RSC58	Q07979	502 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	AEP3	Q12089	606 aa		7.28	□□□□□ -1.24
MSB3	YNL293W	FOB1	O13329	566 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	URA3	P03962	267 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	STE3	P06783	470 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	GCD7	P32502	381 aa	Predicted RBP	7.27	□□□□□ -1.25
MSB3	YNL293W	VPH1	P32563	840 aa	Known RBP	7.27	□□□□□ -1.25
MSB3	YNL293W	AGX1	P43567	385 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	BIR1	P47134	954 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	DAM1	P53267	343 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	YNL146W	P53906	100 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	NIS1	P53939	407 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	7.27	□□□□□ -1.25	RIP-Chip
MSB3	YNL293W	TRM11	Q12463	433 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	YBR298C-A	Q8TGK4	73 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	VCX1	Q99385	411 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.27	□□□□□ -1.25	not detected
MSB3	YNL293W	NIC96	P34077	839 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	TAF14	P35189	244 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	CUE2	P36075	443 aa	Known RBP	7.27	□□□□□ -1.25
MSB3	YNL293W	ADE17	P38009	592 aa	Known RBP	7.27	□□□□□ -1.25
MSB3	YNL293W	ETR1	P38071	380 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	SMF2	P38778	549 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	UTP9	P38882	575 aa	Known RBP	7.27	□□□□□ -1.25
MSB3	YNL293W	AIM24	P47127	394 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	SOL4	P53315	255 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	CAF40	P53829	373 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	ORC3	P54790	616 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	ACL4	Q03771	387 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	SMP3	Q04174	516 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	URH1	Q04179	340 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	GMC2	Q06201	188 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	VIP1	Q06685	1146 aa	Known RBP	7.27	□□□□□ -1.25
MSB3	YNL293W	FMP16	Q12497	93 aa		7.27	□□□□□ -1.25
MSB3	YNL293W	TY1B-BR	Q12193	1756 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	TY1B-GR3	Q12316	1755 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	TY1B-OR	Q92393	1755 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	MATALPHA2	P0CY08	210 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	HMLALPHA2	P0CY09	210 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	HSF1	P10961	833 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	ATR1	P13090	542 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	AEP2	P22136	580 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	NAM7	P30771	971 aa	Known RBP	7.26	□□□□□ -1.25
MSB3	YNL293W	SRP101	P32916	621 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	CAF4	P36130	643 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	SHM1	P37292	490 aa	Predicted RBP	7.26	□□□□□ -1.25
MSB3	YNL293W	SEN34	P39707	275 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	THO1	P40040	218 aa	Known RBP	7.26	□□□□□ -1.25
MSB3	YNL293W	UTP25	P40498	721 aa	Known RBP	7.26	□□□□□ -1.25
MSB3	YNL293W	YJR141W	P47172	347 aa	Predicted RBP	7.26	□□□□□ -1.25
MSB3	YNL293W	DID2	P69771	204 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	SPP1	Q03012	353 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	UTP5	Q04177	643 aa	Known RBP	7.26	□□□□□ -1.25
MSB3	YNL293W	YPR196W	Q06595	470 aa		7.26	□□□□□ -1.25
MSB3	YNL293W	SKI7	Q08491	747 aa	Predicted RBP	7.26	□□□□□ -1.25
MSB3	YNL293W	RCN2	Q12044	265 aa		7.26	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms