RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C ALG7P07286 448 aa3.9□□□□□ -1.79
WHI3YNL197C HRR25P29295 494 aaKnown RBP3.9□□□□□ -1.79
WHI3YNL197C HIS7P33734 552 aaKnown RBP3.9□□□□□ -1.79
WHI3YNL197C YHR097CP38809 366 aaKnown RBP3.9□□□□□ -1.79
WHI3YNL197C ARB1P40024 610 aaKnown RBP3.9□□□□□ -1.79
WHI3YNL197C CAB2P40506 365 aa3.9□□□□□ -1.79
WHI3YNL197C TAM41P53230 385 aa3.9□□□□□ -1.79
WHI3YNL197C RPS15Q01855 142 aaKnown RBP3.9□□□□□ -1.79
WHI3YNL197C VPS64Q03944 604 aa3.9□□□□□ -1.79
WHI3YNL197C HCM1P25364 564 aa3.89□□□□□ -1.79
WHI3YNL197C NTH1P32356 751 aa3.89□□□□□ -1.79
WHI3YNL197C DSS4P32601 143 aa3.89□□□□□ -1.79
WHI3YNL197C SLC1P33333 303 aa3.89□□□□□ -1.79
WHI3YNL197C ELF1P36053 145 aa3.89□□□□□ -1.79
WHI3YNL197C MUD2P36084 527 aaKnown RBP3.89□□□□□ -1.79
WHI3YNL197C FSH1P38777 243 aaKnown RBP3.89□□□□□ -1.79
WHI3YNL197C KAP123P40069 1113 aaKnown RBP3.89□□□□□ -1.79
WHI3YNL197C PSP1P50896 841 aaKnown RBP3.89□□□□□ -1.79
WHI3YNL197C LEU2P04173 364 aaPredicted RBP3.89□□□□□ -1.79
WHI3YNL197C GFD2P25370 566 aaKnown RBP3.89□□□□□ -1.79
WHI3YNL197C FUB1P25659 250 aa3.89□□□□□ -1.79
WHI3YNL197C PPS1P38148 807 aa3.89□□□□□ -1.79
WHI3YNL197C ARA2Q04212 335 aa3.89□□□□□ -1.79
WHI3YNL197C IMH1Q06704 911 aaKnown RBP3.89□□□□□ -1.79
WHI3YNL197C USV1Q12132 391 aa3.89□□□□□ -1.79
WHI3YNL197C SAN1P22470 610 aa3.88□□□□□ -1.79
WHI3YNL197C VPS34P22543 875 aa3.88□□□□□ -1.79
WHI3YNL197C GEX2P36173 615 aa3.88□□□□□ -1.79
WHI3YNL197C ESF2P53743 316 aaKnown RBP3.88□□□□□ -1.79
WHI3YNL197C KIN4Q01919 800 aa3.88□□□□□ -1.79
WHI3YNL197C YMR018WQ04364 514 aa3.88□□□□□ -1.79
WHI3YNL197C YKU80Q04437 629 aa3.88□□□□□ -1.79
WHI3YNL197C VAM6Q07468 1049 aa3.88□□□□□ -1.79
WHI3YNL197C SEC12P11655 471 aa3.87□□□□□ -1.79
WHI3YNL197C YCR061WP25639 631 aa3.87□□□□□ -1.79
WHI3YNL197C CAP1P28495 268 aaKnown RBP3.87□□□□□ -1.79
WHI3YNL197C RIC1P40395 1056 aa3.87□□□□□ -1.79
WHI3YNL197C YGR151CP53287 111 aa3.87□□□□□ -1.79
WHI3YNL197C AIM39Q08223 395 aa3.87□□□□□ -1.79
WHI3YNL197C SDH5Q08230 162 aa3.87□□□□□ -1.79
WHI3YNL197C YOL073CQ08232 322 aa3.87□□□□□ -1.79
WHI3YNL197C PAH1P32567 862 aa3.87□□□□□ -1.79
WHI3YNL197C DHR2P36009 735 aaPredicted RBP3.87□□□□□ -1.79
WHI3YNL197C FMP10P40098 244 aa3.87□□□□□ -1.79
WHI3YNL197C TMA108P40462 946 aa3.87□□□□□ -1.79
WHI3YNL197C YAP1802P53309 568 aa3.87□□□□□ -1.79
WHI3YNL197C ATG21Q02887 496 aa3.87□□□□□ -1.79
WHI3YNL197C YSH1Q06224 779 aaPredicted RBP3.87□□□□□ -1.79
WHI3YNL197C YDL086WQ07505 273 aa3.87□□□□□ -1.79
WHI3YNL197C MED1Q12321 566 aa3.87□□□□□ -1.79
WHI3YNL197C RTP1Q12751 981 aa3.87□□□□□ -1.79
WHI3YNL197C AAC3P18238 307 aa3.86□□□□□ -1.79
WHI3YNL197C PMI40P29952 429 aaKnown RBP3.86□□□□□ -1.79
WHI3YNL197C MPE1P35728 441 aaKnown RBP3.86□□□□□ -1.79
WHI3YNL197C SUL1P38359 859 aa3.86□□□□□ -1.79
WHI3YNL197C VPS8P39702 1274 aa3.86□□□□□ -1.79
WHI3YNL197C BUD16P39988 312 aa3.86□□□□□ -1.79
WHI3YNL197C NOP16P40007 231 aaKnown RBP3.86□□□□□ -1.79
WHI3YNL197C DIP5P53388 608 aa3.86□□□□□ -1.79
WHI3YNL197C CSL4P53859 292 aaPredicted RBP3.86□□□□□ -1.79
WHI3YNL197C MDM1Q01846 1127 aa3.86□□□□□ -1.79
WHI3YNL197C SNO4Q04902 237 aa3.86□□□□□ -1.79
WHI3YNL197C HSP33Q08914 237 aaKnown RBP3.86□□□□□ -1.79
WHI3YNL197C HSP32Q08992 237 aa3.86□□□□□ -1.79
WHI3YNL197C RKI1Q12189 258 aa3.86□□□□□ -1.79
WHI3YNL197C COX17Q12287 69 aa3.86□□□□□ -1.79
WHI3YNL197C PET122P10355 254 aa3.85□□□□□ -1.79
WHI3YNL197C STE4P18851 423 aa3.85□□□□□ -1.79
WHI3YNL197C YPT10P38146 199 aa3.85□□□□□ -1.79
WHI3YNL197C SDH8P38345 138 aa3.85□□□□□ -1.79
WHI3YNL197C KSP1P38691 1029 aaKnown RBP3.85□□□□□ -1.79
WHI3YNL197C NOC2P39744 710 aaKnown RBP3.85□□□□□ -1.79
WHI3YNL197C NDE1P40215 560 aa3.85□□□□□ -1.79
WHI3YNL197C SIP4P46954 829 aa3.85□□□□□ -1.79
WHI3YNL197C SAP4P53036 818 aa3.85□□□□□ -1.79
WHI3YNL197C CBK1P53894 756 aa3.85□□□□□ -1.79
WHI3YNL197C SMX3P54999 86 aaPredicted RBP3.85□□□□□ -1.79
WHI3YNL197C CTT1P06115 562 aa3.85□□□□□ -1.79
WHI3YNL197C RPT3P33298 428 aaKnown RBP3.85□□□□□ -1.79
WHI3YNL197C MRPL36P36531 177 aa3.85□□□□□ -1.79
WHI3YNL197C PSD1P39006 500 aa3.85□□□□□ -1.79
WHI3YNL197C ESL1P40456 1118 aa3.85□□□□□ -1.79
WHI3YNL197C IDS2P46958 469 aa3.85□□□□□ -1.79
WHI3YNL197C COG1P53079 417 aa3.85□□□□□ -1.79
WHI3YNL197C NMA2P53204 395 aa3.85□□□□□ -1.79
WHI3YNL197C ATG4P53867 494 aa3.85□□□□□ -1.79
WHI3YNL197C RIA1P53893 1110 aa3.85□□□□□ -1.79
WHI3YNL197C CRF1Q04930 467 aa3.85□□□□□ -1.79
WHI3YNL197C STP3Q05937 343 aa3.85□□□□□ -1.79
WHI3YNL197C FUM1P08417 488 aaKnown RBP3.84□□□□□ -1.79
WHI3YNL197C RPB2P08518 1224 aaKnown RBP3.84□□□□□ -1.79
WHI3YNL197C CDC16P09798 840 aa3.84□□□□□ -1.79
WHI3YNL197C TY2A-LR1P0C2J4 438 aa3.84□□□□□ -1.79
WHI3YNL197C TY2A-FP0CX61 438 aa3.84□□□□□ -1.79
WHI3YNL197C TY2A-GR2P0CX62 438 aa3.84□□□□□ -1.79
WHI3YNL197C TY2A-CP25383 438 aa3.84□□□□□ -1.79
WHI3YNL197C ARO9P38840 513 aaPredicted RBP3.84□□□□□ -1.79
WHI3YNL197C YEL068CP39977 110 aa3.84□□□□□ -1.79
WHI3YNL197C BUD17P53727 317 aa3.84□□□□□ -1.79
WHI3YNL197C YNL092WP53934 400 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms