RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C BEM4P39011 633 aa4.3□□□□□ -1.72
SRP40YKR092C ARB1P40024 610 aaKnown RBP4.3□□□□□ -1.72
SRP40YKR092C YGR016WP53209 190 aa4.3□□□□□ -1.72
SRP40YKR092C COX18P53239 316 aa4.3□□□□□ -1.72
SRP40YKR092C PAP2P53632 584 aaKnown RBP4.3□□□□□ -1.72
SRP40YKR092C KIN4Q01919 800 aa4.3□□□□□ -1.72
SRP40YKR092C PNG1Q02890 363 aa4.3□□□□□ -1.72
SRP40YKR092C ATG16Q03818 150 aa4.3□□□□□ -1.72
SRP40YKR092C YHM2Q04013 314 aa4.3□□□□□ -1.72
SRP40YKR092C RAD33Q04231 177 aa4.3□□□□□ -1.72
SRP40YKR092C VIP1Q06685 1146 aaKnown RBP4.3□□□□□ -1.72
SRP40YKR092C TMA17Q12513 150 aa4.3□□□□□ -1.72
SRP40YKR092C RPS21BQ3E754 87 aaKnown RBP4.3□□□□□ -1.72
SRP40YKR092C YIL002W-AQ3E7Z5 69 aa4.3□□□□□ -1.72
SRP40YKR092C PDR11P40550 1411 aa4.29□□□□□ -1.72
SRP40YKR092C SSK22P25390 1331 aaPredicted RBP4.29□□□□□ -1.72
SRP40YKR092C INH1P01097 85 aa4.29□□□□□ -1.72
SRP40YKR092C TUF1P02992 437 aaKnown RBP4.29□□□□□ -1.72
SRP40YKR092C PYC1P11154 1178 aaKnown RBP4.29□□□□□ -1.72
SRP40YKR092C HNM1P19807 563 aa4.29□□□□□ -1.72
SRP40YKR092C SPE2P21182 396 aa4.29□□□□□ -1.72
SRP40YKR092C FAR1P21268 830 aa4.29□□□□□ -1.72
SRP40YKR092C MCM3P24279 971 aaKnown RBP4.29□□□□□ -1.72
SRP40YKR092C ERG6P25087 383 aaKnown RBP4.29□□□□□ -1.72
SRP40YKR092C CDC60P26637 1090 aaKnown RBP4.29□□□□□ -1.72
SRP40YKR092C SEC65P29478 273 aa4.29□□□□□ -1.72
SRP40YKR092C EUG1P32474 517 aa4.29□□□□□ -1.72
SRP40YKR092C VPH1P32563 840 aaKnown RBP4.29□□□□□ -1.72
SRP40YKR092C YBL028CP38202 106 aa4.29□□□□□ -1.72
SRP40YKR092C TIF5P38431 405 aaKnown RBP4.29□□□□□ -1.72
SRP40YKR092C RRF1P38771 230 aa4.29□□□□□ -1.72
SRP40YKR092C HXT6P39003 570 aaKnown RBP4.29□□□□□ -1.72
SRP40YKR092C HXT7P39004 570 aa4.29□□□□□ -1.72
SRP40YKR092C RAD26P40352 1085 aa4.29□□□□□ -1.72
SRP40YKR092C PTA1Q01329 785 aaPredicted RBP4.29□□□□□ -1.72
SRP40YKR092C YML119WQ03208 357 aa4.29□□□□□ -1.72
SRP40YKR092C YMR210WQ03649 449 aa4.29□□□□□ -1.72
SRP40YKR092C YMR111CQ04461 462 aaPredicted RBP4.29□□□□□ -1.72
SRP40YKR092C YLR407WQ06070 228 aa4.29□□□□□ -1.72
SRP40YKR092C ATG26Q06321 1198 aa4.29□□□□□ -1.72
SRP40YKR092C ARV1Q06541 321 aa4.29□□□□□ -1.72
SRP40YKR092C YOL073CQ08232 322 aa4.29□□□□□ -1.72
SRP40YKR092C VHS3Q08438 674 aa4.29□□□□□ -1.72
SRP40YKR092C SGO1Q08490 590 aa4.29□□□□□ -1.72
SRP40YKR092C CHC1P22137 1653 aaKnown RBP4.29□□□□□ -1.72
SRP40YKR092C PPR1P07272 904 aaPredicted RBP4.28□□□□□ -1.72
SRP40YKR092C PMS1P14242 873 aa4.28□□□□□ -1.72
SRP40YKR092C SUI2P20459 304 aaKnown RBP4.28□□□□□ -1.72
SRP40YKR092C RNR1P21524 888 aaKnown RBP4.28□□□□□ -1.72
SRP40YKR092C DAL80P26343 269 aa4.28□□□□□ -1.72
SRP40YKR092C ACP1P32463 125 aa4.28□□□□□ -1.72
SRP40YKR092C HIS7P33734 552 aaKnown RBP4.28□□□□□ -1.72
SRP40YKR092C MRPL40P36534 297 aa4.28□□□□□ -1.72
SRP40YKR092C EFM2P38347 419 aa4.28□□□□□ -1.72
SRP40YKR092C YLF2P38746 405 aa4.28□□□□□ -1.72
SRP40YKR092C VPS41P38959 992 aa4.28□□□□□ -1.72
SRP40YKR092C YER034WP40022 185 aaKnown RBP4.28□□□□□ -1.72
SRP40YKR092C YNL195CP40168 261 aa4.28□□□□□ -1.72
SRP40YKR092C BAP3P41815 604 aa4.28□□□□□ -1.72
SRP40YKR092C DUG1P43616 481 aaKnown RBP4.28□□□□□ -1.72
SRP40YKR092C YJL163CP46996 555 aa4.28□□□□□ -1.72
SRP40YKR092C RAD17P48581 401 aa4.28□□□□□ -1.72
SRP40YKR092C ATP22P50273 684 aaPredicted RBP4.28□□□□□ -1.72
SRP40YKR092C SHE4P51534 789 aa4.28□□□□□ -1.72
SRP40YKR092C MTL1P53214 551 aa4.28□□□□□ -1.72
SRP40YKR092C PXR1P53335 271 aaPredicted RBP4.28□□□□□ -1.72
SRP40YKR092C ADY4Q05955 493 aa4.28□□□□□ -1.72
SRP40YKR092C SMD2Q06217 110 aaKnown RBP4.28□□□□□ -1.72
SRP40YKR092C IRC3Q06683 689 aa4.28□□□□□ -1.72
SRP40YKR092C DIA2Q08496 732 aaPredicted RBP4.28□□□□□ -1.72
SRP40YKR092C IRC13Q08630 104 aa4.28□□□□□ -1.72
SRP40YKR092C TRE2Q08693 809 aa4.28□□□□□ -1.72
SRP40YKR092C HFI1Q12060 488 aa4.28□□□□□ -1.72
SRP40YKR092C HRP1Q99383 534 aaKnown RBP4.28□□□□□ -1.72
SRP40YKR092C PET494P07390 489 aaPredicted RBP4.27□□□□□ -1.73
SRP40YKR092C RPS21AP0C0V8 87 aaKnown RBP4.27□□□□□ -1.73
SRP40YKR092C HOM3P10869 527 aa4.27□□□□□ -1.73
SRP40YKR092C KSS1P14681 368 aa4.27□□□□□ -1.73
SRP40YKR092C ROX1P25042 368 aa4.27□□□□□ -1.73
SRP40YKR092C BUD14P27637 709 aa4.27□□□□□ -1.73
SRP40YKR092C FTR1P40088 404 aa4.27□□□□□ -1.73
SRP40YKR092C NDC80P40460 691 aa4.27□□□□□ -1.73
SRP40YKR092C VTC2P43585 828 aa4.27□□□□□ -1.73
SRP40YKR092C NOP9P47077 666 aaKnown RBP4.27□□□□□ -1.73
SRP40YKR092C YJR120WP47157 116 aa4.27□□□□□ -1.73
SRP40YKR092C HOL1P53389 586 aa4.27□□□□□ -1.73
SRP40YKR092C FOL1P53848 824 aa4.27□□□□□ -1.73
SRP40YKR092C ZDS2P54786 942 aa4.27□□□□□ -1.73
SRP40YKR092C REX2P54964 269 aaKnown RBP4.27□□□□□ -1.73
SRP40YKR092C LAP3Q01532 483 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
SRP40YKR092C HMO1Q03973 246 aaKnown RBP4.27□□□□□ -1.73
SRP40YKR092C NNT1Q05874 261 aa4.27□□□□□ -1.73
SRP40YKR092C TSR2Q06672 205 aaKnown RBP4.27□□□□□ -1.73
SRP40YKR092C SWA2Q06677 668 aa4.27□□□□□ -1.73
SRP40YKR092C CIR2Q08822 631 aa4.27□□□□□ -1.73
SRP40YKR092C SLX4Q12098 748 aa4.27□□□□□ -1.73
SRP40YKR092C RRP36Q12481 300 aaPredicted RBP4.27□□□□□ -1.73
SRP40YKR092C VMR1P38735 1592 aa4.27□□□□□ -1.73
SRP40YKR092C ATP4P05626 244 aa4.26□□□□□ -1.73
SRP40YKR092C SEN2P16658 377 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 193.3 ms