RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	RBL2	P48606	106 aa	Known RBP	3.54	□□□□□ -1.84
PEX1	YKL197C	MNT4	P53745	580 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	YNL034W	P53963	612 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	RCM1	P53972	490 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	YNL018C	P53976	612 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	RSC4	Q02206	625 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	TFB2	Q02939	513 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	SPC2	Q04969	178 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	PUN1	Q06991	263 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	GUP2	Q08929	609 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	KEL3	Q08979	651 aa	Predicted RBP	3.54	□□□□□ -1.84
PEX1	YKL197C	CMC2	Q3E7A4	109 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	TY4B-H	P0C2J7	1802 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	TY4B-J	P47024	1803 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	TDH1	P00360	332 aa	Known RBP	3.54	□□□□□ -1.84
PEX1	YKL197C	NMT1	P14743	455 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	KAR2	P16474	682 aa	Known RBP	3.54	□□□□□ -1.84
PEX1	YKL197C	GFD2	P25370	566 aa	Known RBP	3.54	□□□□□ -1.84
PEX1	YKL197C	ISC10	P32645	267 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	LOS1	P33418	1100 aa	Predicted RBP	3.54	□□□□□ -1.84
PEX1	YKL197C	FRT2	P39734	528 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	BUD16	P39988	312 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	TED1	P40533	473 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	XKS1	P42826	600 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	RGD2	P43556	714 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	VPS16	Q03308	798 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	YDR131C	Q03899	556 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	SPC19	Q03954	165 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	GFD1	Q04839	188 aa	Known RBP	3.54	□□□□□ -1.84
PEX1	YKL197C	RTN1	Q04947	295 aa	Known RBP	3.54	□□□□□ -1.84
PEX1	YKL197C	THI3	Q07471	609 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	GPR1	Q12361	961 aa		3.54	□□□□□ -1.84
PEX1	YKL197C	PGA3	Q12746	312 aa	Known RBP	3.54	□□□□□ -1.84
PEX1	YKL197C	TMA7	Q3E764	64 aa	Known RBP	3.54	□□□□□ -1.84
PEX1	YKL197C	CAR2	P07991	424 aa	Known RBP	3.53	□□□□□ -1.84
PEX1	YKL197C	YPK2	P18961	677 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	DAP2	P18962	818 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	RPB10	P22139	70 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	PRP28	P23394	588 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	CDC12	P32468	407 aa	Known RBP	3.53	□□□□□ -1.84
PEX1	YKL197C	VPS17	P32913	551 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	MDJ1	P35191	511 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	TPO5	P36029	618 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	PCH2	P38126	564 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	BMT2	P38278	337 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	SDH8	P38345	138 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	RPN10	P38886	268 aa	Known RBP	3.53	□□□□□ -1.84
PEX1	YKL197C	RCY1	P39531	840 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	TPA1	P40032	644 aa	Known RBP	3.53	□□□□□ -1.84
PEX1	YKL197C	NUP82	P40368	713 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	GCN20	P43535	752 aa	Known RBP	3.53	□□□□□ -1.84
PEX1	YKL197C	SLT2	Q00772	484 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	FIN1	Q03898	291 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	EMI2	Q04409	500 aa	Known RBP	3.53	□□□□□ -1.84
PEX1	YKL197C	ECM38	Q05902	660 aa	Predicted RBP	3.53	□□□□□ -1.84
PEX1	YKL197C	YFT2	Q06676	274 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	YDL109C	Q12103	647 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	CET1	O13297	549 aa	Predicted RBP	3.53	□□□□□ -1.84
PEX1	YKL197C	HIS4	P00815	799 aa	Known RBP	3.53	□□□□□ -1.84
PEX1	YKL197C	SRM1	P21827	482 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
PEX1	YKL197C	NAM9	P27929	486 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	TRK2	P28584	889 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	KAP122	P32767	1081 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	ORC2	P32833	620 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	SSO1	P32867	290 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	TIM23	P32897	222 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	PHO11	P35842	467 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	NUP133	P36161	1157 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	RGD1	P38339	666 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	PHO12	P38693	467 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	PAN5	P38787	379 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	STL1	P39932	569 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	TAF4	P50105	388 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	YAP1802	P53309	568 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	TOF1	P53840	1238 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	INA17	Q02888	182 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	HER2	Q03557	464 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	VPS64	Q03944	604 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	TY1A-DR2	Q03964	440 aa	Known RBP	3.53	□□□□□ -1.84
PEX1	YKL197C	RBA50	Q04418	439 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	RBS1	Q05672	457 aa	Known RBP	3.53	□□□□□ -1.84
PEX1	YKL197C	YEH2	Q07950	538 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	NSI1	Q12457	570 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	YOS9	Q99220	542 aa		3.53	□□□□□ -1.84
PEX1	YKL197C	SES1	P07284	462 aa	Known RBP	3.53	□□□□□ -1.85
PEX1	YKL197C	MSB1	P21339	1137 aa	Known RBP	3.53	□□□□□ -1.85
PEX1	YKL197C	URE2	P23202	354 aa	Known RBP	3.53	□□□□□ -1.85
PEX1	YKL197C	PXL1	P36166	706 aa		3.53	□□□□□ -1.85
PEX1	YKL197C	RFC3	P38629	340 aa		3.53	□□□□□ -1.85
PEX1	YKL197C	KEL1	P38853	1164 aa	Known RBP	3.53	□□□□□ -1.85
PEX1	YKL197C	IMA5	P40884	581 aa		3.53	□□□□□ -1.85
PEX1	YKL197C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.85	not detected
PEX1	YKL197C	MNN11	P46985	422 aa	Known RBP	3.53	□□□□□ -1.85
PEX1	YKL197C	PRP31	P49704	494 aa	Predicted RBP	3.53	□□□□□ -1.85
PEX1	YKL197C	YNR068C	P53754	272 aa		3.53	□□□□□ -1.85
PEX1	YKL197C	EGD1	Q02642	157 aa	Known RBP	3.53	□□□□□ -1.85
PEX1	YKL197C	WHI4	Q07655	649 aa	Known RBP	3.53	□□□□□ -1.85
PEX1	YKL197C	AEP3	Q12089	606 aa		3.53	□□□□□ -1.85
PEX1	YKL197C	SCM3	Q12334	223 aa		3.53	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms