RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	UFO1	Q04511	668 aa		2.51	□□□□□ -2.01
DOT6	YER088C	PHM6	Q05637	104 aa		2.51	□□□□□ -2.01
DOT6	YER088C	HCA4	P20448	770 aa	Known RBP	2.5	□□□□□ -2.01
DOT6	YER088C	CWH43	P25618	953 aa		2.5	□□□□□ -2.01
DOT6	YER088C	APL3	P38065	1025 aa		2.5	□□□□□ -2.01
DOT6	YER088C	STU2	P46675	888 aa		2.5	□□□□□ -2.01
DOT6	YER088C	YNR071C	P53757	342 aa		2.5	□□□□□ -2.01
DOT6	YER088C	VPS5	Q92331	675 aa		2.5	□□□□□ -2.01
DOT6	YER088C	GFA1	P14742	717 aa	Known RBP	2.49	□□□□□ -2.01
DOT6	YER088C	CDC43	P18898	376 aa		2.49	□□□□□ -2.01
DOT6	YER088C	ARG1	P22768	420 aa		2.49	□□□□□ -2.01
DOT6	YER088C	DMC1	P25453	334 aa		2.49	□□□□□ -2.01
DOT6	YER088C	ADY2	P25613	283 aa		2.49	□□□□□ -2.01
DOT6	YER088C	YPT10	P38146	199 aa		2.49	□□□□□ -2.01
DOT6	YER088C	STL1	P39932	569 aa		2.49	□□□□□ -2.01
DOT6	YER088C	YEL020C	P39994	560 aa		2.49	□□□□□ -2.01
DOT6	YER088C	PMT6	P42934	759 aa		2.49	□□□□□ -2.01
DOT6	YER088C	CNM67	P53865	581 aa	Known RBP	2.49	□□□□□ -2.01
DOT6	YER088C	YDR179W-A	Q03983	463 aa		2.49	□□□□□ -2.01
DOT6	YER088C	SND1	Q04007	877 aa		2.49	□□□□□ -2.01
DOT6	YER088C	TUF1	P02992	437 aa	Known RBP	2.49	□□□□□ -2.01
DOT6	YER088C	KAR1	P11927	433 aa		2.49	□□□□□ -2.01
DOT6	YER088C	VPS33	P20795	691 aa		2.49	□□□□□ -2.01
DOT6	YER088C	MUP3	P38734	546 aa		2.49	□□□□□ -2.01
DOT6	YER088C	PAC2	P39937	518 aa		2.49	□□□□□ -2.01
DOT6	YER088C	YIL166C	P40445	542 aa		2.49	□□□□□ -2.01
DOT6	YER088C	SPC98	P53540	846 aa		2.49	□□□□□ -2.01
DOT6	YER088C	KCC4	P25389	1037 aa		2.48	□□□□□ -2.01
DOT6	YER088C	CNE1	P27825	502 aa		2.48	□□□□□ -2.01
DOT6	YER088C	PRP45	P28004	379 aa	Predicted RBP	2.48	□□□□□ -2.01
DOT6	YER088C	PPE1	P38796	400 aa		2.48	□□□□□ -2.01
DOT6	YER088C	RRP8	P38961	392 aa	Known RBP	2.48	□□□□□ -2.01
DOT6	YER088C	YEL025C	P39991	1188 aa		2.48	□□□□□ -2.01
DOT6	YER088C	MRK1	P50873	501 aa		2.48	□□□□□ -2.01
DOT6	YER088C	YIP4	P53093	235 aa		2.48	□□□□□ -2.01
DOT6	YER088C	YGL117W	P53133	265 aa		2.48	□□□□□ -2.01
DOT6	YER088C	CEG1	Q01159	459 aa	Predicted RBP	2.48	□□□□□ -2.01
DOT6	YER088C	AIM41	Q12032	185 aa		2.48	□□□□□ -2.01
DOT6	YER088C	NUP188	P52593	1655 aa	Known RBP	2.48	□□□□□ -2.01
DOT6	YER088C	URA3	P03962	267 aa		2.47	□□□□□ -2.01
DOT6	YER088C	CAP1	P28495	268 aa	Known RBP	2.47	□□□□□ -2.01
DOT6	YER088C	YIL092W	P40497	633 aa		2.47	□□□□□ -2.01
DOT6	YER088C	ASN1	P49089	572 aa	Known RBP	2.47	□□□□□ -2.01
DOT6	YER088C	BUD17	P53727	317 aa		2.47	□□□□□ -2.01
DOT6	YER088C	CEF1	Q03654	590 aa	Predicted RBP	2.47	□□□□□ -2.01
DOT6	YER088C	GIS1	Q03833	894 aa		2.47	□□□□□ -2.01
DOT6	YER088C	ARG7	Q04728	441 aa		2.47	□□□□□ -2.01
DOT6	YER088C	ARO10	Q06408	635 aa		2.47	□□□□□ -2.01
DOT6	YER088C	MPD2	Q99316	277 aa		2.47	□□□□□ -2.01
DOT6	YER088C	RPN13	O13563	156 aa		2.47	□□□□□ -2.01
DOT6	YER088C	YMC1	P32331	307 aa		2.47	□□□□□ -2.01
DOT6	YER088C	PET309	P32522	965 aa	Predicted RBP	2.47	□□□□□ -2.01
DOT6	YER088C	DHR2	P36009	735 aa	Predicted RBP	2.47	□□□□□ -2.01
DOT6	YER088C	RIX1	P38883	763 aa	Predicted RBP	2.47	□□□□□ -2.01
DOT6	YER088C	YJL193W	P39542	402 aa		2.47	□□□□□ -2.01
DOT6	YER088C	SSP120	P39931	234 aa	Known RBP	2.47	□□□□□ -2.01
DOT6	YER088C	HOL1	P53389	586 aa		2.47	□□□□□ -2.01
DOT6	YER088C	SQS1	P53866	767 aa	Known RBP	2.47	□□□□□ -2.01
DOT6	YER088C	DAK1	P54838	584 aa	Known RBP	2.47	□□□□□ -2.01
DOT6	YER088C	NGL2	Q03264	515 aa	Known RBP	2.47	□□□□□ -2.01
DOT6	YER088C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.47	□□□□□ -2.01	not detected
DOT6	YER088C	DBP10	Q12389	995 aa	Known RBP	2.47	□□□□□ -2.01
DOT6	YER088C	CAT8	P39113	1433 aa		2.47	□□□□□ -2.01
DOT6	YER088C	ADH4	P10127	382 aa		2.46	□□□□□ -2.02
DOT6	YER088C	PHO3	P24031	467 aa		2.46	□□□□□ -2.02
DOT6	YER088C	PMC1	P38929	1173 aa	Predicted RBP	2.46	□□□□□ -2.02
DOT6	YER088C	IMA5	P40884	581 aa		2.46	□□□□□ -2.02
DOT6	YER088C	COS12	P53053	380 aa		2.46	□□□□□ -2.02
DOT6	YER088C	TRS23	Q03784	219 aa		2.46	□□□□□ -2.02
DOT6	YER088C	PSF3	Q12146	194 aa		2.46	□□□□□ -2.02
DOT6	YER088C	YBT1	P32386	1661 aa		2.46	□□□□□ -2.02
DOT6	YER088C	YSP2	Q06681	1438 aa		2.46	□□□□□ -2.02
DOT6	YER088C	TPK2	P06245	380 aa		2.46	□□□□□ -2.02
DOT6	YER088C	STE12	P13574	688 aa		2.46	□□□□□ -2.02
DOT6	YER088C	TGL1	P34163	548 aa		2.46	□□□□□ -2.02
DOT6	YER088C	SCS2	P40075	244 aa	Known RBP	2.46	□□□□□ -2.02
DOT6	YER088C	GSM1	P42950	618 aa		2.46	□□□□□ -2.02
DOT6	YER088C	SAP4	P53036	818 aa		2.46	□□□□□ -2.02
DOT6	YER088C	IOC4	Q04213	475 aa		2.46	□□□□□ -2.02
DOT6	YER088C	TRI1	Q05024	226 aa		2.46	□□□□□ -2.02
DOT6	YER088C	MDM20	Q12387	796 aa	Known RBP	2.46	□□□□□ -2.02
DOT6	YER088C	TMA7	Q3E764	64 aa	Known RBP	2.46	□□□□□ -2.02
DOT6	YER088C	IML1	P47170	1584 aa		2.45	□□□□□ -2.02
DOT6	YER088C	TUB1	P09733	447 aa	Known RBP	2.45	□□□□□ -2.02
DOT6	YER088C	PCK1	P10963	549 aa		2.45	□□□□□ -2.02
DOT6	YER088C	SST2	P11972	698 aa	Known RBP	2.45	□□□□□ -2.02
DOT6	YER088C	PMA2	P19657	947 aa		2.45	□□□□□ -2.02
DOT6	YER088C	ILV6	P25605	309 aa	Known RBP	2.45	□□□□□ -2.02
DOT6	YER088C	DSS4	P32601	143 aa		2.45	□□□□□ -2.02
DOT6	YER088C	PPZ2	P33329	710 aa		2.45	□□□□□ -2.02
DOT6	YER088C	NIC96	P34077	839 aa		2.45	□□□□□ -2.02
DOT6	YER088C	SWD1	P39706	426 aa		2.45	□□□□□ -2.02
DOT6	YER088C	CPR8	P53728	308 aa		2.45	□□□□□ -2.02
DOT6	YER088C	YNL092W	P53934	400 aa		2.45	□□□□□ -2.02
DOT6	YER088C	APM1	Q00776	475 aa	Predicted RBP	2.45	□□□□□ -2.02
DOT6	YER088C	MFM1	Q02783	413 aa		2.45	□□□□□ -2.02
DOT6	YER088C	NUR1	Q12066	484 aa		2.45	□□□□□ -2.02
DOT6	YER088C	NDJ1	Q12366	352 aa		2.45	□□□□□ -2.02
DOT6	YER088C	CPA2	P03965	1118 aa	Known RBP	2.44	□□□□□ -2.02
DOT6	YER088C	GAL1	P04385	528 aa		2.44	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 129.7 ms