RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA8, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA8YEL051W SEC5P89102 971 aa3.59□□□□□ -1.83
VMA8YEL051W SPT7P35177 1332 aa3.59□□□□□ -1.83
VMA8YEL051W HEM1P09950 548 aaPredicted RBP3.58□□□□□ -1.84
VMA8YEL051W AQY1P0CD91 305 aa3.58□□□□□ -1.84
VMA8YEL051W YEF3P16521 1044 aaKnown RBP3.58□□□□□ -1.84
VMA8YEL051W RPC34P32910 317 aa3.58□□□□□ -1.84
VMA8YEL051W LOT5P34234 306 aa3.58□□□□□ -1.84
VMA8YEL051W SRP68P38687 599 aaKnown RBP3.58□□□□□ -1.84
VMA8YEL051W SQS1P53866 767 aaKnown RBP3.58□□□□□ -1.84
VMA8YEL051W USA1Q03714 838 aa3.58□□□□□ -1.84
VMA8YEL051W GFD1Q04839 188 aaKnown RBP3.58□□□□□ -1.84
VMA8YEL051W PEX15Q08215 383 aa3.58□□□□□ -1.84
VMA8YEL051W YMR084WA2P2R3 262 aa3.57□□□□□ -1.84
VMA8YEL051W SST2P11972 698 aaKnown RBP3.57□□□□□ -1.84
VMA8YEL051W RNR3P21672 869 aaKnown RBP3.57□□□□□ -1.84
VMA8YEL051W NIC96P34077 839 aa3.57□□□□□ -1.84
VMA8YEL051W EXO1P39875 702 aa3.57□□□□□ -1.84
VMA8YEL051W TPM2P40414 161 aa3.57□□□□□ -1.84
VMA8YEL051W GAT1P43574 510 aa3.57□□□□□ -1.84
VMA8YEL051W SAP4P53036 818 aa3.57□□□□□ -1.84
VMA8YEL051W PEF1P53238 335 aa3.57□□□□□ -1.84
VMA8YEL051W ORM2Q06144 216 aa3.57□□□□□ -1.84
VMA8YEL051W YOR378WQ08902 515 aa3.57□□□□□ -1.84
VMA8YEL051W CWC2Q12046 339 aaPredicted RBP3.57□□□□□ -1.84
VMA8YEL051W YEL076C-AP0CX16 216 aa3.56□□□□□ -1.84
VMA8YEL051W YLR464WP0CX17 216 aa3.56□□□□□ -1.84
VMA8YEL051W PCK1P10963 549 aa3.56□□□□□ -1.84
VMA8YEL051W MRPL9P31334 269 aa3.56□□□□□ -1.84
VMA8YEL051W YEL076CP39971 216 aa3.56□□□□□ -1.84
VMA8YEL051W ULP2P40537 1034 aaPredicted RBP3.56□□□□□ -1.84
VMA8YEL051W YFL015CP43578 164 aa3.56□□□□□ -1.84
VMA8YEL051W IRC5P43610 853 aa3.56□□□□□ -1.84
VMA8YEL051W HOL1P53389 586 aa3.56□□□□□ -1.84
VMA8YEL051W ATP23P53722 227 aa3.56□□□□□ -1.84
VMA8YEL051W IRC3Q06683 689 aa3.56□□□□□ -1.84
VMA8YEL051W BRE1Q07457 700 aaKnown RBP3.56□□□□□ -1.84
VMA8YEL051W FRE7Q12333 620 aa3.56□□□□□ -1.84
VMA8YEL051W GAL1P04385 528 aa3.55□□□□□ -1.84
VMA8YEL051W ATP4P05626 244 aa3.55□□□□□ -1.84
VMA8YEL051W HSC82P15108 705 aaKnown RBP3.55□□□□□ -1.84
VMA8YEL051W EAF5P39995 279 aa3.55□□□□□ -1.84
VMA8YEL051W YIL092WP40497 633 aa3.55□□□□□ -1.84
VMA8YEL051W YJL043WP47053 257 aa3.55□□□□□ -1.84
VMA8YEL051W TCB2P48231 1178 aa3.55□□□□□ -1.84
VMA8YEL051W MEH1Q02205 184 aa3.55□□□□□ -1.84
VMA8YEL051W WAR1Q03631 944 aa3.55□□□□□ -1.84
VMA8YEL051W SEC3P33332 1336 aaKnown RBP3.54□□□□□ -1.84
VMA8YEL051W SEC12P11655 471 aa3.54□□□□□ -1.84
VMA8YEL051W DAL5P15365 543 aa3.54□□□□□ -1.84
VMA8YEL051W CWH43P25618 953 aa3.54□□□□□ -1.84
VMA8YEL051W DSS4P32601 143 aa3.54□□□□□ -1.84
VMA8YEL051W BEM3P32873 1128 aa3.54□□□□□ -1.84
VMA8YEL051W MPE1P35728 441 aaKnown RBP3.54□□□□□ -1.84
VMA8YEL051W YKL133CP36066 463 aa3.54□□□□□ -1.84
VMA8YEL051W APD1P38281 316 aa3.54□□□□□ -1.84
VMA8YEL051W OPT1P40897 799 aa3.54□□□□□ -1.84
VMA8YEL051W NMD5P46970 1048 aa3.54□□□□□ -1.84
VMA8YEL051W MDR1P53258 950 aa3.54□□□□□ -1.84
VMA8YEL051W MET14Q02196 202 aa3.54□□□□□ -1.84
VMA8YEL051W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
VMA8YEL051W AAC1P04710 309 aa3.53□□□□□ -1.84
VMA8YEL051W YPK1P12688 680 aaKnown RBP3.53□□□□□ -1.84
VMA8YEL051W BET2P20133 325 aa3.53□□□□□ -1.84
VMA8YEL051W ERP2P39704 215 aa3.53□□□□□ -1.84
VMA8YEL051W HIS6P40545 261 aa3.53□□□□□ -1.84
VMA8YEL051W PSA1P41940 361 aaKnown RBP3.53□□□□□ -1.84
VMA8YEL051W TDA10P42938 290 aa3.53□□□□□ -1.84
VMA8YEL051W BST1P43571 1029 aa3.53□□□□□ -1.84
VMA8YEL051W TAN1P53072 289 aaPredicted RBP3.53□□□□□ -1.84
VMA8YEL051W PIL1P53252 339 aaKnown RBP3.53□□□□□ -1.84
VMA8YEL051W GIR2Q03768 265 aaPredicted RBP3.53□□□□□ -1.84
VMA8YEL051W NUR1Q12066 484 aa3.53□□□□□ -1.84
VMA8YEL051W RGT2Q12300 763 aa3.53□□□□□ -1.84
VMA8YEL051W VPS5Q92331 675 aa3.53□□□□□ -1.84
VMA8YEL051W GSY2P27472 705 aa3.52□□□□□ -1.85
VMA8YEL051W PTP2P29461 750 aa3.52□□□□□ -1.85
VMA8YEL051W SAW1P39735 261 aa3.52□□□□□ -1.85
VMA8YEL051W NOC2P39744 710 aaKnown RBP3.52□□□□□ -1.85
VMA8YEL051W STL1P39932 569 aa3.52□□□□□ -1.85
VMA8YEL051W STP1Q00947 519 aa3.52□□□□□ -1.85
VMA8YEL051W PCL8Q08966 492 aa3.52□□□□□ -1.85
VMA8YEL051W PET111P08468 800 aa3.51□□□□□ -1.85
VMA8YEL051W RNA1P11745 407 aaKnown RBP3.51□□□□□ -1.85
VMA8YEL051W PHO3P24031 467 aa3.51□□□□□ -1.85
VMA8YEL051W BLI1P35727 113 aa3.51□□□□□ -1.85
VMA8YEL051W ASK10P48361 1146 aa3.51□□□□□ -1.85
VMA8YEL051W MNT2P53059 558 aa3.51□□□□□ -1.85
VMA8YEL051W CNM67P53865 581 aaKnown RBP3.51□□□□□ -1.85
VMA8YEL051W MTD1Q02046 320 aaKnown RBP3.51□□□□□ -1.85
VMA8YEL051W MLC2Q06580 163 aa3.51□□□□□ -1.85
VMA8YEL051W BSP1Q06604 576 aa3.51□□□□□ -1.85
VMA8YEL051W PSK2Q08217 1101 aa3.51□□□□□ -1.85
VMA8YEL051W CFT2Q12102 859 aaPredicted RBP3.51□□□□□ -1.85
VMA8YEL051W PRS5Q12265 496 aaKnown RBP3.51□□□□□ -1.85
VMA8YEL051W RDL1Q12305 139 aaKnown RBP3.51□□□□□ -1.85
VMA8YEL051W INO80P53115 1489 aa3.5□□□□□ -1.85
VMA8YEL051W ARG1P22768 420 aa3.5□□□□□ -1.85
VMA8YEL051W CDC5P32562 705 aa3.5□□□□□ -1.85
VMA8YEL051W MFT1P33441 392 aaKnown RBP3.5□□□□□ -1.85
VMA8YEL051W SDS22P36047 338 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms