RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	COS3	P0CX13	379 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	RNA15	P25299	296 aa	Predicted RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	SBA1	P28707	216 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	MOT2	P34909	587 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	MLH1	P38920	769 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	YJR054W	P47114	497 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	RRN9	P53437	365 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	CEG1	Q01159	459 aa	Predicted RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	SMD2	Q06217	110 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	GYP1	Q08484	637 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	YPL199C	Q08954	240 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	NMD4	Q12129	218 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	PNO1	Q99216	274 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	HTS1	P07263	546 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	HAP4	P14064	554 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	NSP1	P14907	823 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	CDC15	P27636	974 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	CUE3	P53137	624 aa	Known RBP	4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	YGR066C	P53242	292 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	APS2	Q00381	147 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	ATP25	Q03153	612 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	PCL8	Q08966	492 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	NBP2	Q12163	236 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	AHC1	Q12433	566 aa		4.61	□□□□□ -1.67
YDR261C-D	YDR261C-D	ANB1	P19211	157 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	PGS1	P25578	521 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	PDR3	P33200	976 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	SRB2	P34162	210 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	NPR2	P39923	615 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	COG3	P40094	801 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	YGR026W	P53217	278 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	DMA2	P53924	522 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	TRM12	Q04235	462 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	VID22	Q05934	901 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	HRK1	Q08732	759 aa	Known RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	TCO89	Q08921	799 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	FOB1	O13329	566 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	ADE5,7	P07244	802 aa	Known RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	BUD2	P33314	1104 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	UTP11	P34247	250 aa	Predicted RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	YKL075C	P36083	450 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	PCM1	P38628	557 aa	Known RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	CRP1	P38845	465 aa	Known RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	ICP55	P40051	511 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	BST1	P43571	1029 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	CHA4	P43634	648 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	RAD17	P48581	401 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	YMR102C	Q03177	834 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	NHP10	Q03435	203 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	BER1	Q06688	274 aa	Known RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	THI21	Q08975	551 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	SAS5	Q99314	248 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	PRI1	P10363	409 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	PEP5	P12868	1029 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	MRPL15	P36523	253 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	VMA13	P41807	478 aa	Known RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	ORC5	P50874	479 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	ALG12	P53730	551 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	NHX1	Q04121	633 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	YDR514C	Q04408	483 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	YPR172W	Q06608	200 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	THP3	Q12049	470 aa	Known RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	COQ4	O13525	335 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	GPH1	P06738	902 aa	Known RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	APE1	P14904	514 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	PBN1	P25580	416 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	RAD16	P31244	790 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	LSM12	P38828	187 aa	Known RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	UIP3	P39547	235 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	DOT5	P40553	215 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	GYP8	P43570	497 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	SAP155	P43612	1002 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	SCY1	P53009	804 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	YGL108C	P53139	140 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	COG7	P53195	279 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	NOG2	P53742	486 aa	Known RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	KTR5	P53966	522 aa	Predicted RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	HAL9	Q12180	1030 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	RPL7B	Q12213	244 aa	Known RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	PAA1	Q12447	191 aa	Known RBP	4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	SNF8	Q12483	233 aa		4.6	□□□□□ -1.67
YDR261C-D	YDR261C-D	HOM2	P13663	365 aa	Known RBP	4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	FRS2	P15625	503 aa	Known RBP	4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	AFT1	P22149	690 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	PCL1	P24867	279 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	RNA14	P25298	677 aa	Known RBP	4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	MGT1	P26188	188 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	CDC40	P40968	455 aa	Predicted RBP	4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	PSA1	P41940	361 aa	Known RBP	4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	RPA14	P50106	137 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	NCS2	P53923	493 aa	Predicted RBP	4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	TRM82	Q03774	444 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	FRQ1	Q06389	190 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	HRT3	Q12347	344 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	RPL17A	P05740	184 aa	Known RBP	4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	ERG20	P08524	352 aa	Known RBP	4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	CAD1	P24813	409 aa	Known RBP	4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	STE14	P32584	239 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	YET1	P35723	206 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	MYO3	P36006	1272 aa		4.59	□□□□□ -1.67

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