RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	EFB1	P32471	206 aa	Known RBP	4.9	□□□□□ -1.63
SUP35	YDR172W	TRM2	P33753	639 aa		4.9	□□□□□ -1.63
SUP35	YDR172W	MED8	P38304	223 aa		4.9	□□□□□ -1.63
SUP35	YDR172W	POP4	P38336	279 aa		4.9	□□□□□ -1.63
SUP35	YDR172W	DSN1	P40568	576 aa		4.9	□□□□□ -1.63
SUP35	YDR172W	ALT1	P52893	592 aa		4.9	□□□□□ -1.63
SUP35	YDR172W	CWC21	Q03375	135 aa	Known RBP	4.9	□□□□□ -1.63
SUP35	YDR172W	RIB2	Q12362	591 aa	Known RBP	4.9	□□□□□ -1.63
SUP35	YDR172W	CDC24	P11433	854 aa	Predicted RBP	4.89	□□□□□ -1.63
SUP35	YDR172W	BCS1	P32839	456 aa		4.89	□□□□□ -1.63
SUP35	YDR172W	MRP4	P32902	394 aa		4.89	□□□□□ -1.63
SUP35	YDR172W	RPC37	P36121	282 aa		4.89	□□□□□ -1.63
SUP35	YDR172W	AGP2	P38090	596 aa		4.89	□□□□□ -1.63
SUP35	YDR172W	YSW1	P38280	609 aa		4.89	□□□□□ -1.63
SUP35	YDR172W	PCA1	P38360	1216 aa		4.89	□□□□□ -1.63
SUP35	YDR172W	FLC2	P39719	783 aa		4.89	□□□□□ -1.63
SUP35	YDR172W	SNZ3	P43545	298 aa		4.89	□□□□□ -1.63
SUP35	YDR172W	PPT1	P53043	513 aa		4.89	□□□□□ -1.63
SUP35	YDR172W	DUS1	P53759	423 aa	Known RBP	4.89	□□□□□ -1.63
SUP35	YDR172W	SNZ2	P53824	298 aa		4.89	□□□□□ -1.63
SUP35	YDR172W	RPL22B	P56628	122 aa	Known RBP	4.89	□□□□□ -1.63
SUP35	YDR172W	RSC4	Q02206	625 aa		4.89	□□□□□ -1.63
SUP35	YDR172W	ADA2	Q02336	434 aa		4.89	□□□□□ -1.63
SUP35	YDR172W	FAR8	Q05040	523 aa		4.89	□□□□□ -1.63
SUP35	YDR172W	ILV2	P07342	687 aa	Known RBP	4.88	□□□□□ -1.63
SUP35	YDR172W	CHS1	P08004	1131 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	YMR085W	P0CF18	432 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	ARG1	P22768	420 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	RPT2	P40327	437 aa	Known RBP	4.88	□□□□□ -1.63
SUP35	YDR172W	TDA10	P42938	290 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	STB4	P50104	949 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	MND1	P53102	219 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	COG6	P53959	839 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	YPR027C	Q12079	277 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	SUT2	Q12286	268 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	CDC10	P25342	322 aa	Known RBP	4.88	□□□□□ -1.63
SUP35	YDR172W	VBA3	P25594	458 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	YCR015C	P25616	317 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	MEI4	P29467	408 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	HXT3	P32466	567 aa	Known RBP	4.88	□□□□□ -1.63
SUP35	YDR172W	LOS1	P33418	1100 aa	Predicted RBP	4.88	□□□□□ -1.63
SUP35	YDR172W	VBA5	P36172	582 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	SAW1	P39735	261 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	YFL066C	P43538	392 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	HOP2	P53187	214 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	YNL040W	P53960	456 aa	Predicted RBP	4.88	□□□□□ -1.63
SUP35	YDR172W	YNL011C	P53980	444 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	UBX4	P54730	416 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	SHR3	Q02774	210 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	YMR027W	Q04371	470 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	ERV41	Q04651	352 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	THI7	Q05998	598 aa		4.88	□□□□□ -1.63
SUP35	YDR172W	KAP95	Q06142	861 aa	Known RBP	4.88	□□□□□ -1.63
SUP35	YDR172W	GLN3	P18494	730 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	BAS1	P22035	811 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	SLY1	P22213	666 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	DUR3	P33413	735 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	SWC5	P38326	303 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	PCM1	P38628	557 aa	Known RBP	4.87	□□□□□ -1.63
SUP35	YDR172W	PPX1	P38698	397 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	OAF1	P39720	1047 aa	Predicted RBP	4.87	□□□□□ -1.63
SUP35	YDR172W	GEM1	P39722	662 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	AVT2	P39981	480 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	ARG2	P40360	574 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	TMA108	P40462	946 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	YIL054W	P40524	105 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	NCS6	P53088	359 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	CDC55	Q00362	526 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	DOT1	Q04089	582 aa	Known RBP	4.87	□□□□□ -1.63
SUP35	YDR172W	SXM1	Q04175	944 aa	Known RBP	4.87	□□□□□ -1.63
SUP35	YDR172W	PRM6	Q04705	352 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	AIM39	Q08223	395 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	TRE1	Q08919	783 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	VPS54	Q12071	889 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	AI1	P03875	834 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	SEC1	P30619	724 aa	Known RBP	4.87	□□□□□ -1.63
SUP35	YDR172W	PDB1	P32473	366 aa	Known RBP	4.87	□□□□□ -1.63
SUP35	YDR172W	DEF1	P35732	738 aa	Known RBP	4.87	□□□□□ -1.63
SUP35	YDR172W	ABZ1	P37254	787 aa	Predicted RBP	4.87	□□□□□ -1.63
SUP35	YDR172W	YBR032W	P38223	100 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	MSR1	P38714	643 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	SMF2	P38778	549 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	NMD3	P38861	518 aa	Known RBP	4.87	□□□□□ -1.63
SUP35	YDR172W	YER186C	P40101	306 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	LAM5	P43560	674 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	ALG11	P53954	548 aa	Known RBP	4.87	□□□□□ -1.63
SUP35	YDR172W	ARO80	Q04052	950 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	RSC2	Q06488	889 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	DIS3	Q08162	1001 aa	Known RBP	4.87	□□□□□ -1.63
SUP35	YDR172W	TAF10	Q12030	206 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	PUS1	Q12211	544 aa	Known RBP	4.87	□□□□□ -1.63
SUP35	YDR172W	WHI5	Q12416	295 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	CTF3	Q12748	733 aa		4.87	□□□□□ -1.63
SUP35	YDR172W	PMR1	P13586	950 aa		4.86	□□□□□ -1.63
SUP35	YDR172W	PRP4	P20053	465 aa	Known RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	ADE2	P21264	571 aa	Known RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	SAT4	P25333	603 aa	Known RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	CDC20	P26309	610 aa		4.86	□□□□□ -1.63
SUP35	YDR172W	PYC2	P32327	1180 aa	Known RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	PAH1	P32567	862 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms