RNA–Protein interactions for RNA: YDR113C

PDS1, Transcript of Securin, yeast

Gene PDS1, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDS1	YDR113C	VID27	P40157	782 aa		4.29	□□□□□ -1.72
PDS1	YDR113C	GAT1	P43574	510 aa		4.29	□□□□□ -1.72
PDS1	YDR113C	SPC105	P53148	917 aa		4.29	□□□□□ -1.72
PDS1	YDR113C	COQ6	P53318	479 aa		4.29	□□□□□ -1.72
PDS1	YDR113C	ESF2	P53743	316 aa	Known RBP	4.29	□□□□□ -1.72
PDS1	YDR113C	MTD1	Q02046	320 aa	Known RBP	4.29	□□□□□ -1.72
PDS1	YDR113C	ECM38	Q05902	660 aa	Predicted RBP	4.29	□□□□□ -1.72
PDS1	YDR113C	CWC2	Q12046	339 aa	Predicted RBP	4.29	□□□□□ -1.72
PDS1	YDR113C	TUF1	P02992	437 aa	Known RBP	4.28	□□□□□ -1.72
PDS1	YDR113C	RPL7A	P05737	244 aa	Known RBP	4.28	□□□□□ -1.72
PDS1	YDR113C	CWH43	P25618	953 aa		4.28	□□□□□ -1.72
PDS1	YDR113C	LTP1	P40347	161 aa		4.28	□□□□□ -1.72
PDS1	YDR113C	TAX4	P47030	604 aa		4.28	□□□□□ -1.72
PDS1	YDR113C	PIP2	P52960	996 aa		4.28	□□□□□ -1.72
PDS1	YDR113C	MNT2	P53059	558 aa		4.28	□□□□□ -1.72
PDS1	YDR113C	SQS1	P53866	767 aa	Known RBP	4.28	□□□□□ -1.72
PDS1	YDR113C	YDL073W	Q07454	984 aa		4.28	□□□□□ -1.72
PDS1	YDR113C	YPL216W	Q08964	1102 aa		4.28	□□□□□ -1.72
PDS1	YDR113C	RTK1	Q12100	620 aa	Predicted RBP	4.28	□□□□□ -1.72
PDS1	YDR113C	RPL7B	Q12213	244 aa	Known RBP	4.28	□□□□□ -1.72
PDS1	YDR113C	VPS5	Q92331	675 aa		4.28	□□□□□ -1.72
PDS1	YDR113C	PTP1	P25044	335 aa		4.27	□□□□□ -1.73
PDS1	YDR113C	TFC4	P33339	1025 aa		4.27	□□□□□ -1.73
PDS1	YDR113C	CCL1	P37366	393 aa		4.27	□□□□□ -1.73
PDS1	YDR113C	RIM4	P38741	713 aa		4.27	□□□□□ -1.73
PDS1	YDR113C	RPT2	P40327	437 aa	Known RBP	4.27	□□□□□ -1.73
PDS1	YDR113C	MAD2	P40958	196 aa		4.27	□□□□□ -1.73
PDS1	YDR113C	SAP4	P53036	818 aa		4.27	□□□□□ -1.73
PDS1	YDR113C	SLD3	P53135	668 aa		4.27	□□□□□ -1.73
PDS1	YDR113C	MET14	Q02196	202 aa		4.27	□□□□□ -1.73
PDS1	YDR113C	DIN7	Q12086	430 aa		4.27	□□□□□ -1.73
PDS1	YDR113C	ERG11	P10614	530 aa		4.26	□□□□□ -1.73
PDS1	YDR113C	WHI2	P12611	486 aa		4.26	□□□□□ -1.73
PDS1	YDR113C	MRS6	P32864	603 aa	Known RBP	4.26	□□□□□ -1.73
PDS1	YDR113C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
PDS1	YDR113C	AI5_ALPHA	Q9ZZX1	630 aa		4.26	□□□□□ -1.73
PDS1	YDR113C	GAL1	P04385	528 aa		4.25	□□□□□ -1.73
PDS1	YDR113C	PCK1	P10963	549 aa		4.25	□□□□□ -1.73
PDS1	YDR113C	ARG1	P22768	420 aa		4.25	□□□□□ -1.73
PDS1	YDR113C	MBR1	P23493	339 aa		4.25	□□□□□ -1.73
PDS1	YDR113C	HOT13	P36078	116 aa		4.25	□□□□□ -1.73
PDS1	YDR113C	EMP65	P40085	556 aa		4.25	□□□□□ -1.73
PDS1	YDR113C	PEX15	Q08215	383 aa		4.25	□□□□□ -1.73
PDS1	YDR113C	TGS1	Q12052	315 aa		4.25	□□□□□ -1.73
PDS1	YDR113C	PGK1	P00560	416 aa	Known RBP	4.24	□□□□□ -1.73
PDS1	YDR113C	URA3	P03962	267 aa		4.24	□□□□□ -1.73
PDS1	YDR113C	AQY1	P0CD91	305 aa		4.24	□□□□□ -1.73
PDS1	YDR113C	RNR3	P21672	869 aa	Known RBP	4.24	□□□□□ -1.73
PDS1	YDR113C	PTP2	P29461	750 aa		4.24	□□□□□ -1.73
PDS1	YDR113C	DSS4	P32601	143 aa		4.24	□□□□□ -1.73
PDS1	YDR113C	PTH2	P34222	208 aa		4.24	□□□□□ -1.73
PDS1	YDR113C	LOT5	P34234	306 aa		4.24	□□□□□ -1.73
PDS1	YDR113C	STL1	P39932	569 aa		4.24	□□□□□ -1.73
PDS1	YDR113C	YFL015C	P43578	164 aa		4.24	□□□□□ -1.73
PDS1	YDR113C	NET1	P47035	1189 aa		4.24	□□□□□ -1.73
PDS1	YDR113C	YNR071C	P53757	342 aa		4.24	□□□□□ -1.73
PDS1	YDR113C	RRP6	Q12149	733 aa	Known RBP	4.24	□□□□□ -1.73
PDS1	YDR113C	RRI2	Q12348	645 aa		4.24	□□□□□ -1.73
PDS1	YDR113C	YUR1	P26725	428 aa		4.23	□□□□□ -1.73
PDS1	YDR113C	SSH4	P32343	579 aa		4.23	□□□□□ -1.73
PDS1	YDR113C	NFU1	P32860	256 aa		4.23	□□□□□ -1.73
PDS1	YDR113C	NIC96	P34077	839 aa		4.23	□□□□□ -1.73
PDS1	YDR113C	EXO84	P38261	753 aa		4.23	□□□□□ -1.73
PDS1	YDR113C	EXO1	P39875	702 aa		4.23	□□□□□ -1.73
PDS1	YDR113C	PSR2	Q07949	397 aa		4.23	□□□□□ -1.73
PDS1	YDR113C	PCL8	Q08966	492 aa		4.23	□□□□□ -1.73
PDS1	YDR113C	ERP4	Q12450	207 aa		4.23	□□□□□ -1.73
PDS1	YDR113C	APN1	P22936	367 aa		4.22	□□□□□ -1.73
PDS1	YDR113C	RRP8	P38961	392 aa	Known RBP	4.22	□□□□□ -1.73
PDS1	YDR113C	SCS3	P53012	380 aa		4.22	□□□□□ -1.73
PDS1	YDR113C	HOL1	P53389	586 aa		4.22	□□□□□ -1.73
PDS1	YDR113C	YNL092W	P53934	400 aa		4.22	□□□□□ -1.73
PDS1	YDR113C	MDM1	Q01846	1127 aa		4.22	□□□□□ -1.73
PDS1	YDR113C	MLC2	Q06580	163 aa		4.22	□□□□□ -1.73
PDS1	YDR113C	RGT2	Q12300	763 aa		4.22	□□□□□ -1.73
PDS1	YDR113C	AAC1	P04710	309 aa		4.21	□□□□□ -1.74
PDS1	YDR113C	HEM1	P09950	548 aa	Predicted RBP	4.21	□□□□□ -1.74
PDS1	YDR113C	HSC82	P15108	705 aa	Known RBP	4.21	□□□□□ -1.74
PDS1	YDR113C	NUP1	P20676	1076 aa		4.21	□□□□□ -1.74
PDS1	YDR113C	PET309	P32522	965 aa	Predicted RBP	4.21	□□□□□ -1.74
PDS1	YDR113C	CDC5	P32562	705 aa		4.21	□□□□□ -1.74
PDS1	YDR113C	YKL133C	P36066	463 aa		4.21	□□□□□ -1.74
PDS1	YDR113C	SSP120	P39931	234 aa	Known RBP	4.21	□□□□□ -1.74
PDS1	YDR113C	YIL092W	P40497	633 aa		4.21	□□□□□ -1.74
PDS1	YDR113C	COS12	P53053	380 aa		4.21	□□□□□ -1.74
PDS1	YDR113C	MDR1	P53258	950 aa		4.21	□□□□□ -1.74
PDS1	YDR113C	PHM6	Q05637	104 aa		4.21	□□□□□ -1.74
PDS1	YDR113C	FRE7	Q12333	620 aa		4.21	□□□□□ -1.74
PDS1	YDR113C	SEC3	P33332	1336 aa	Known RBP	4.21	□□□□□ -1.74
PDS1	YDR113C	YMR084W	A2P2R3	262 aa		4.2	□□□□□ -1.74
PDS1	YDR113C	SEC12	P11655	471 aa		4.2	□□□□□ -1.74
PDS1	YDR113C	YPK1	P12688	680 aa	Known RBP	4.2	□□□□□ -1.74
PDS1	YDR113C	BET2	P20133	325 aa		4.2	□□□□□ -1.74
PDS1	YDR113C	PRP45	P28004	379 aa	Predicted RBP	4.2	□□□□□ -1.74
PDS1	YDR113C	RPC34	P32910	317 aa		4.2	□□□□□ -1.74
PDS1	YDR113C	XBP1	P40489	647 aa		4.2	□□□□□ -1.74
PDS1	YDR113C	TDA10	P42938	290 aa		4.2	□□□□□ -1.74
PDS1	YDR113C	BST1	P43571	1029 aa		4.2	□□□□□ -1.74
PDS1	YDR113C	PUS4	P48567	403 aa	Known RBP	4.2	□□□□□ -1.74
PDS1	YDR113C	PAP2	P53632	584 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms