RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C NNF2P53253 936 aa1.53□□□□□ -2.16
MSH3YCR092C UTP8P53276 713 aaKnown RBP1.53□□□□□ -2.16
MSH3YCR092C PPM1Q04081 328 aa1.53□□□□□ -2.16
MSH3YCR092C YDR109CQ04585 715 aa1.53□□□□□ -2.16
MSH3YCR092C YSH1Q06224 779 aaPredicted RBP1.53□□□□□ -2.16
MSH3YCR092C HRK1Q08732 759 aaKnown RBP1.53□□□□□ -2.16
MSH3YCR092C TGL5Q12043 749 aa1.53□□□□□ -2.16
MSH3YCR092C RKM4Q12504 494 aa1.53□□□□□ -2.16
MSH3YCR092C ABF1P14164 731 aa1.53□□□□□ -2.16
MSH3YCR092C VMA3P25515 160 aa1.53□□□□□ -2.16
MSH3YCR092C PEX34P25584 144 aa1.53□□□□□ -2.16
MSH3YCR092C ATG19P35193 415 aa1.53□□□□□ -2.16
MSH3YCR092C GIP1P38229 639 aa1.53□□□□□ -2.16
MSH3YCR092C ERV46P39727 415 aa1.53□□□□□ -2.16
MSH3YCR092C MKT1P40850 830 aaKnown RBP1.53□□□□□ -2.16
MSH3YCR092C MAD1P40957 749 aa1.53□□□□□ -2.16
MSH3YCR092C MMM1P41800 426 aa1.53□□□□□ -2.16
MSH3YCR092C CIR1P42940 261 aa1.53□□□□□ -2.16
MSH3YCR092C YFR018CP43599 363 aa1.53□□□□□ -2.16
MSH3YCR092C RPS0BP46654 252 aaKnown RBP1.53□□□□□ -2.16
MSH3YCR092C COQ5P49017 307 aa1.53□□□□□ -2.16
MSH3YCR092C SPC98P53540 846 aa1.53□□□□□ -2.16
MSH3YCR092C PRM1P53835 661 aa1.53□□□□□ -2.16
MSH3YCR092C CSL4P53859 292 aaPredicted RBP1.53□□□□□ -2.16
MSH3YCR092C ORC3P54790 616 aa1.53□□□□□ -2.16
MSH3YCR092C GAD1Q04792 585 aa1.53□□□□□ -2.16
MSH3YCR092C NKP2Q06162 153 aa1.53□□□□□ -2.16
MSH3YCR092C FPR4Q06205 392 aaPredicted RBP1.53□□□□□ -2.16
MSH3YCR092C TSR1Q07381 788 aaKnown RBP1.53□□□□□ -2.16
MSH3YCR092C GPI13Q07830 1017 aa1.53□□□□□ -2.16
MSH3YCR092C SAM4Q08985 325 aaKnown RBP1.53□□□□□ -2.16
MSH3YCR092C YPR027CQ12079 277 aa1.53□□□□□ -2.16
MSH3YCR092C SVS1Q12254 260 aa1.53□□□□□ -2.16
MSH3YCR092C YLR122CQ12312 125 aa1.53□□□□□ -2.16
MSH3YCR092C HRT3Q12347 344 aa1.53□□□□□ -2.16
MSH3YCR092C YOR032W-AQ8TGS1 66 aa1.53□□□□□ -2.16
MSH3YCR092C TRP3P00937 484 aa1.53□□□□□ -2.17
MSH3YCR092C PPR1P07272 904 aaPredicted RBP1.53□□□□□ -2.17
MSH3YCR092C YEL076C-AP0CX16 216 aa1.53□□□□□ -2.17
MSH3YCR092C YLR464WP0CX17 216 aa1.53□□□□□ -2.17
MSH3YCR092C MRPL33P20084 86 aa1.53□□□□□ -2.17
MSH3YCR092C SSD1P24276 1250 aaKnown RBP RIP-Chip data1.53□□□□□ -2.17not detected
MSH3YCR092C PMT1P33775 817 aa1.53□□□□□ -2.17
MSH3YCR092C YKR073CP36153 106 aa1.53□□□□□ -2.17
MSH3YCR092C DUG2P38149 878 aa1.53□□□□□ -2.17
MSH3YCR092C YSW1P38280 609 aa1.53□□□□□ -2.17
MSH3YCR092C YBR225WP38321 900 aa1.53□□□□□ -2.17
MSH3YCR092C MSR1P38714 643 aa1.53□□□□□ -2.17
MSH3YCR092C SIP3P38717 1229 aa1.53□□□□□ -2.17
MSH3YCR092C YEL076CP39971 216 aa1.53□□□□□ -2.17
MSH3YCR092C BUD13P46947 266 aaPredicted RBP1.53□□□□□ -2.17
MSH3YCR092C YJL132WP47014 750 aa1.53□□□□□ -2.17
MSH3YCR092C CCM1P48237 864 aaPredicted RBP1.53□□□□□ -2.17
MSH3YCR092C LCL3P53153 274 aa1.53□□□□□ -2.17
MSH3YCR092C SLT2Q00772 484 aa1.53□□□□□ -2.17
MSH3YCR092C NPL3Q01560 414 aaKnown RBP RIP-Chip data1.53□□□□□ -2.17not detected
MSH3YCR092C MZM1Q03429 123 aaPredicted RBP1.53□□□□□ -2.17
MSH3YCR092C YMR160WQ03823 816 aa1.53□□□□□ -2.17
MSH3YCR092C FMP45Q07651 309 aa1.53□□□□□ -2.17
MSH3YCR092C GPM3Q12326 303 aa1.53□□□□□ -2.17
MSH3YCR092C GPR1Q12361 961 aa1.53□□□□□ -2.17
MSH3YCR092C TY1A-NL1Q12391 440 aaKnown RBP1.53□□□□□ -2.17
MSH3YCR092C YOR111WQ99210 232 aa1.53□□□□□ -2.17
MSH3YCR092C CHO2P05374 869 aaKnown RBP1.52□□□□□ -2.17
MSH3YCR092C YER152CP10356 443 aa1.52□□□□□ -2.17
MSH3YCR092C MNE1P24720 663 aa1.52□□□□□ -2.17
MSH3YCR092C SGF29P25554 259 aa1.52□□□□□ -2.17
MSH3YCR092C MLS1P30952 554 aa1.52□□□□□ -2.17
MSH3YCR092C XRS2P33301 854 aa1.52□□□□□ -2.17
MSH3YCR092C PXA2P34230 853 aa1.52□□□□□ -2.17
MSH3YCR092C YPT52P36018 234 aaKnown RBP1.52□□□□□ -2.17
MSH3YCR092C BYE1P36106 594 aa1.52□□□□□ -2.17
MSH3YCR092C STN1P38960 494 aa1.52□□□□□ -2.17
MSH3YCR092C LYS9P38999 446 aa1.52□□□□□ -2.17
MSH3YCR092C IST3P40565 148 aaPredicted RBP1.52□□□□□ -2.17
MSH3YCR092C GTS1P40956 396 aa1.52□□□□□ -2.17
MSH3YCR092C TCB2P48231 1178 aa1.52□□□□□ -2.17
MSH3YCR092C MND1P53102 219 aa1.52□□□□□ -2.17
MSH3YCR092C TAM41P53230 385 aa1.52□□□□□ -2.17
MSH3YCR092C INP2Q03824 705 aa1.52□□□□□ -2.17
MSH3YCR092C HEL2Q05580 639 aaKnown RBP1.52□□□□□ -2.17
MSH3YCR092C TRE2Q08693 809 aa1.52□□□□□ -2.17
MSH3YCR092C YOR223WQ12015 292 aa1.52□□□□□ -2.17
MSH3YCR092C GLO4Q12320 285 aa1.52□□□□□ -2.17
MSH3YCR092C AI5_BETAQ9ZZX0 354 aa1.52□□□□□ -2.17
MSH3YCR092C POL30P15873 258 aaKnown RBP1.52□□□□□ -2.17
MSH3YCR092C GAS1P22146 559 aaKnown RBP1.52□□□□□ -2.17
MSH3YCR092C SNT1P25357 1226 aa1.52□□□□□ -2.17
MSH3YCR092C PBN1P25580 416 aa1.52□□□□□ -2.17
MSH3YCR092C APL1P27351 700 aa1.52□□□□□ -2.17
MSH3YCR092C YJU2P28320 278 aaPredicted RBP1.52□□□□□ -2.17
MSH3YCR092C KIP1P28742 1111 aa1.52□□□□□ -2.17
MSH3YCR092C PRO1P32264 428 aa1.52□□□□□ -2.17
MSH3YCR092C PUB1P32588 453 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
MSH3YCR092C ORC2P32833 620 aa1.52□□□□□ -2.17
MSH3YCR092C YKT6P36015 200 aaKnown RBP1.52□□□□□ -2.17
MSH3YCR092C TCD2P36101 447 aaKnown RBP1.52□□□□□ -2.17
MSH3YCR092C TGL4P36165 910 aa1.52□□□□□ -2.17
MSH3YCR092C FAD1P38913 306 aa1.52□□□□□ -2.17
MSH3YCR092C SEC24P40482 926 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 61.8 ms