RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C MIT1P40002 666 aa5.36□□□□□ -1.55
YPK3YBR028C PMT6P42934 759 aa5.36□□□□□ -1.55
YPK3YBR028C BUD17P53727 317 aa5.36□□□□□ -1.55
YPK3YBR028C ECM16Q04217 1267 aaKnown RBP5.36□□□□□ -1.55
YPK3YBR028C PSR2Q07949 397 aa5.36□□□□□ -1.55
YPK3YBR028C ICL2Q12031 575 aa5.36□□□□□ -1.55
YPK3YBR028C PNS1Q12412 539 aa5.36□□□□□ -1.55
YPK3YBR028C VPS34P22543 875 aa5.35□□□□□ -1.55
YPK3YBR028C RIT1P23796 513 aa5.35□□□□□ -1.55
YPK3YBR028C CNE1P27825 502 aa5.35□□□□□ -1.55
YPK3YBR028C MTH1P35198 433 aa5.35□□□□□ -1.55
YPK3YBR028C SPC98P53540 846 aa5.35□□□□□ -1.55
YPK3YBR028C DAK1P54838 584 aaKnown RBP5.35□□□□□ -1.55
YPK3YBR028C YDR179W-AQ03983 463 aa5.35□□□□□ -1.55
YPK3YBR028C MRH1Q12117 320 aaPredicted RBP5.35□□□□□ -1.55
YPK3YBR028C GFA1P14742 717 aaKnown RBP5.34□□□□□ -1.55
YPK3YBR028C YMC2P38087 329 aa5.34□□□□□ -1.55
YPK3YBR028C VPS64Q03944 604 aa5.34□□□□□ -1.55
YPK3YBR028C BLS1Q06071 122 aa5.34□□□□□ -1.55
YPK3YBR028C AIM6Q07716 390 aa5.34□□□□□ -1.55
YPK3YBR028C MIS1P09440 975 aaKnown RBP5.33□□□□□ -1.56
YPK3YBR028C KIN3P22209 435 aa5.33□□□□□ -1.56
YPK3YBR028C YCL049CP25577 312 aa5.33□□□□□ -1.56
YPK3YBR028C ARB1P40024 610 aaKnown RBP5.33□□□□□ -1.56
YPK3YBR028C GTR1Q00582 310 aa5.33□□□□□ -1.56
YPK3YBR028C TRS130Q03660 1102 aa5.33□□□□□ -1.56
YPK3YBR028C YPL216WQ08964 1102 aa5.33□□□□□ -1.56
YPK3YBR028C CLB4P24871 460 aa5.33□□□□□ -1.56
YPK3YBR028C YPT10P38146 199 aa5.33□□□□□ -1.56
YPK3YBR028C CAB2P40506 365 aa5.33□□□□□ -1.56
YPK3YBR028C THI6P41835 540 aa5.33□□□□□ -1.56
YPK3YBR028C IDS2P46958 469 aa5.33□□□□□ -1.56
YPK3YBR028C IMA1P53051 589 aa5.33□□□□□ -1.56
YPK3YBR028C SVL3Q03088 825 aaKnown RBP5.33□□□□□ -1.56
YPK3YBR028C NGL2Q03264 515 aaKnown RBP5.33□□□□□ -1.56
YPK3YBR028C CTT1P06115 562 aa5.32□□□□□ -1.56
YPK3YBR028C BET2P20133 325 aa5.32□□□□□ -1.56
YPK3YBR028C DPB3P27344 201 aa5.32□□□□□ -1.56
YPK3YBR028C BEM3P32873 1128 aa5.32□□□□□ -1.56
YPK3YBR028C CCL1P37366 393 aa5.32□□□□□ -1.56
YPK3YBR028C SDH8P38345 138 aa5.32□□□□□ -1.56
YPK3YBR028C ESF2P53743 316 aaKnown RBP5.32□□□□□ -1.56
YPK3YBR028C YML131WQ03102 365 aa5.32□□□□□ -1.56
YPK3YBR028C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
YPK3YBR028C MTF2P10849 440 aa5.31□□□□□ -1.56
YPK3YBR028C YCR061WP25639 631 aa5.31□□□□□ -1.56
YPK3YBR028C ARP2P32381 391 aaKnown RBP5.31□□□□□ -1.56
YPK3YBR028C CDC5P32562 705 aa5.31□□□□□ -1.56
YPK3YBR028C EMP70P32802 667 aa5.31□□□□□ -1.56
YPK3YBR028C SWE1P32944 819 aa5.31□□□□□ -1.56
YPK3YBR028C SAP4P53036 818 aa5.31□□□□□ -1.56
YPK3YBR028C TFC6Q06339 672 aa5.31□□□□□ -1.56
YPK3YBR028C BUD21Q08492 214 aaPredicted RBP5.31□□□□□ -1.56
YPK3YBR028C BIK1P11709 440 aa5.3□□□□□ -1.56
YPK3YBR028C BNA1P47096 177 aa5.3□□□□□ -1.56
YPK3YBR028C MRPL13Q02204 264 aa5.3□□□□□ -1.56
YPK3YBR028C ARA2Q04212 335 aa5.3□□□□□ -1.56
YPK3YBR028C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
YPK3YBR028C MDM20Q12387 796 aaKnown RBP5.3□□□□□ -1.56
YPK3YBR028C VPS73P53142 486 aaKnown RBP5.29□□□□□ -1.56
YPK3YBR028C YNL092WP53934 400 aa5.29□□□□□ -1.56
YPK3YBR028C SUL2Q12325 893 aa5.29□□□□□ -1.56
YPK3YBR028C NUC1P08466 329 aa5.29□□□□□ -1.56
YPK3YBR028C CDC43P18898 376 aa5.29□□□□□ -1.56
YPK3YBR028C UBC1P21734 215 aaKnown RBP5.29□□□□□ -1.56
YPK3YBR028C DMC1P25453 334 aa5.29□□□□□ -1.56
YPK3YBR028C LOT5P34234 306 aa5.29□□□□□ -1.56
YPK3YBR028C PSY4P38193 441 aa5.29□□□□□ -1.56
YPK3YBR028C IFA38P38286 347 aa5.29□□□□□ -1.56
YPK3YBR028C ARO9P38840 513 aaPredicted RBP5.29□□□□□ -1.56
YPK3YBR028C SMK1P41808 388 aa5.29□□□□□ -1.56
YPK3YBR028C RRT6P53117 311 aaPredicted RBP5.29□□□□□ -1.56
YPK3YBR028C CRF1Q04930 467 aa5.29□□□□□ -1.56
YPK3YBR028C IRC10Q08118 586 aa5.29□□□□□ -1.56
YPK3YBR028C SUT2Q12286 268 aa5.29□□□□□ -1.56
YPK3YBR028C YPK1P12688 680 aaKnown RBP5.28□□□□□ -1.56
YPK3YBR028C MUP3P38734 546 aa5.28□□□□□ -1.56
YPK3YBR028C PIH1P38768 344 aa5.28□□□□□ -1.56
YPK3YBR028C FSH1P38777 243 aaKnown RBP5.28□□□□□ -1.56
YPK3YBR028C PSF2P40359 213 aa5.28□□□□□ -1.56
YPK3YBR028C BST1P43571 1029 aa5.28□□□□□ -1.56
YPK3YBR028C ASN1P49089 572 aaKnown RBP5.28□□□□□ -1.56
YPK3YBR028C YGL117WP53133 265 aa5.28□□□□□ -1.56
YPK3YBR028C TAM41P53230 385 aa5.28□□□□□ -1.56
YPK3YBR028C ATG21Q02887 496 aa5.28□□□□□ -1.56
YPK3YBR028C YDL073WQ07454 984 aa5.28□□□□□ -1.56
YPK3YBR028C SSP2Q08646 371 aa5.28□□□□□ -1.56
YPK3YBR028C TGS1Q12052 315 aa5.28□□□□□ -1.56
YPK3YBR028C ZPS1Q12512 249 aa5.28□□□□□ -1.56
YPK3YBR028C LEU2P04173 364 aaPredicted RBP5.27□□□□□ -1.57
YPK3YBR028C TPK2P06245 380 aa5.27□□□□□ -1.57
YPK3YBR028C STE12P13574 688 aa5.27□□□□□ -1.57
YPK3YBR028C XRS2P33301 854 aa5.27□□□□□ -1.57
YPK3YBR028C COQ6P53318 479 aa5.27□□□□□ -1.57
YPK3YBR028C SSM4P40318 1319 aa5.27□□□□□ -1.57
YPK3YBR028C CPA2P03965 1118 aaKnown RBP5.26□□□□□ -1.57
YPK3YBR028C RNR3P21672 869 aaKnown RBP5.26□□□□□ -1.57
YPK3YBR028C TDP1P38319 544 aa5.26□□□□□ -1.57
YPK3YBR028C IML2P47031 731 aa5.26□□□□□ -1.57
YPK3YBR028C YML119WQ03208 357 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 74.9 ms