RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 FAM193AP78312 1265 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 CPSF6Q16630 551 aaKnown RBP eCLIP5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 ADAMTSL4Q6UY14 1074 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 C1orf127Q8N9H9 656 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 CLP1Q92989 425 aaKnown RBP5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 FBXL18Q96ME1 805 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 CNTN3Q9P232 1028 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 KIAA1107Q9UPP5 1409 aa5.05□□□□□ -1.6
HMGB1P50-201ENST00000605814 MTUS2Q5JR59 1369 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 USP47Q96K76 1375 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 ANKRD30AQ9BXX3 1397 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 UGGT2Q9NYU1 1516 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 TRPA1O75762 1119 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 EDN3P14138 238 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 MSNP26038 577 aaKnown RBP5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 HOXA10P31260 410 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 ZNF445P59923 1031 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 FAM69CQ0P6D2 419 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 NOM1Q5C9Z4 860 aaKnown RBP5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 DUSP27Q5VZP5 1158 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 SASS6Q6UVJ0 657 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 VSIG10LQ86VR7 867 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 GAS2L3Q86XJ1 694 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 SMC5Q8IY18 1101 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 ABI1Q8IZP0 508 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 BSNDQ8WZ55 320 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 ANP32BQ92688 251 aaKnown RBP5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 OSMRQ99650 979 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 DZANK1Q9NVP4 752 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 SALL4Q9UJQ4 1053 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 KIF14Q15058 1648 aa5.04□□□□□ -1.6
HMGB1P50-201ENST00000605814 CAMSAP2Q08AD1 1489 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 RALGAPBQ86X10 1494 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 MEGF11A6BM72 1044 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 CYP26A1O43174 497 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 PLIN1O60240 522 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 EIF4EBP3O60516 100 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 PHACTR2O75167 634 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 ATG7O95352 703 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 FOSL1P15407 271 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 HMGN5P82970 282 aaKnown RBP5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 SLFN5Q08AF3 891 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 FZD5Q13467 585 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 TMEM102Q8N9M5 508 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 FLCNQ8NFG4 579 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 ASIC4Q96FT7 647 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 GBP4Q96PP9 640 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 ADGRE2Q9UHX3 823 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 SOX13Q9UN79 622 aa5.03□□□□□ -1.6
HMGB1P50-201ENST00000605814 EHBP1L1Q8N3D4 1523 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 ARHGEF12Q9NZN5 1544 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 SNAPC4Q5SXM2 1469 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 A6NHS1 94 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 F13BP05160 661 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 GSTM4Q03013 218 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 RAB3GAP1Q15042 981 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 HP1BP3Q5SSJ5 553 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 C20orf194Q5TEA3 1177 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 MYRIPQ8NFW9 859 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 PMFBP1Q8TBY8 1022 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 HELQQ8TDG4 1101 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 FBLIM1Q8WUP2 373 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 CCDC97Q96F63 343 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 HHIPQ96QV1 700 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 LRRC4CQ9HCJ2 640 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 SEPT3Q9UH03 358 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 ZKSCAN5Q9Y2L8 839 aa5.02□□□□□ -1.61
HMGB1P50-201ENST00000605814 PRDM2Q13029 1718 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 UQCRHLA0A096LP55 91 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 LOC100289279A0A1B0GTE1 492 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 TM4SF5O14894 197 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 IGHDP01880 384 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 PDGFAP04085 211 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 UQCRHP07919 91 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 RAB6AP20340 208 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 MZF1P28698 734 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 NASPP49321 788 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 KLHL40Q2TBA0 621 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 ALKBH2Q6NS38 261 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 XKR5Q6UX68 686 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 FTSJ3Q8IY81 847 aaKnown RBP5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 SMG8Q8ND04 991 aaKnown RBP5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 AGBL5Q8NDL9 886 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 SNX29Q8TEQ0 813 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 FEZ1Q99689 392 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 ZKSCAN3Q9BRR0 538 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 SLKQ9H2G2 1235 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 BSDC1Q9NW68 430 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 CCDC39Q9UFE4 941 aa5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 R3HCC1Q9Y3T6 440 aaKnown RBP5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 EPRSP07814 1512 aaKnown RBP5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 ZNF608Q9ULD9 1512 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P50-201ENST00000605814 CFTRP13569 1480 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 GRIN2BQ13224 1484 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 SAMD9Q5K651 1589 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 FHOD3Q2V2M9 1422 aa5□□□□□ -1.61
HMGB1P50-201ENST00000605814 SOX1O00570 391 aaPredicted RBP5□□□□□ -1.61
HMGB1P50-201ENST00000605814 DRD2P14416 443 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms