RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 PPP1R12CQ9BZL4 782 aa9.09□□□□□ -0.95
CNOT1-218ENST00000569732 SCN9AQ15858 1988 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 PDE4DIPQ5VU43 2346 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 COL4A1P02462 1669 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 FKTNO75072 461 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 UFL1O94874 794 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 ALDH1A1P00352 501 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 MMP14P50281 582 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 NR1H3Q13133 447 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 TRIM28Q13263 835 aaKnown RBP9.08□□□□□ -0.96
CNOT1-218ENST00000569732 INTS3Q68E01 1043 aaKnown RBP9.08□□□□□ -0.96
CNOT1-218ENST00000569732 PODNQ7Z5L7 613 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 FAM160A2Q8N612 972 aaPredicted RBP9.08□□□□□ -0.96
CNOT1-218ENST00000569732 KCTD12Q96CX2 325 aaKnown RBP9.08□□□□□ -0.96
CNOT1-218ENST00000569732 TRAIPQ9BWF2 469 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 MYH16Q9H6N6 1097 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 ANKIB1Q9P2G1 1089 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 MAP10Q9P2G4 905 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 GGA1Q9UJY5 639 aa9.08□□□□□ -0.96
CNOT1-218ENST00000569732 USP17L3A6NCW0 530 aa9.07□□□□□ -0.96
CNOT1-218ENST00000569732 USP17L4A6NCW7 530 aa9.07□□□□□ -0.96
CNOT1-218ENST00000569732 ZBBXA8MT70 800 aa9.07□□□□□ -0.96
CNOT1-218ENST00000569732 IRS4O14654 1257 aaPredicted RBP9.07□□□□□ -0.96
CNOT1-218ENST00000569732 EXOSC9Q06265 439 aaKnown RBP9.07□□□□□ -0.96
CNOT1-218ENST00000569732 HABP4Q5JVS0 413 aaKnown RBP9.07□□□□□ -0.96
CNOT1-218ENST00000569732 NYAP1Q6ZVC0 841 aa9.07□□□□□ -0.96
CNOT1-218ENST00000569732 USP17L1Q7RTZ2 530 aa9.07□□□□□ -0.96
CNOT1-218ENST00000569732 RETREG2Q8NC44 543 aa9.07□□□□□ -0.96
CNOT1-218ENST00000569732 PBXIP1Q96AQ6 731 aa9.07□□□□□ -0.96
CNOT1-218ENST00000569732 GMLQ99445 158 aa9.07□□□□□ -0.96
CNOT1-218ENST00000569732 EVA1BQ9NVM1 165 aa9.07□□□□□ -0.96
CNOT1-218ENST00000569732 CHPF2Q9P2E5 772 aa9.07□□□□□ -0.96
CNOT1-218ENST00000569732 DBF4Q9UBU7 674 aaPredicted RBP9.07□□□□□ -0.96
CNOT1-218ENST00000569732 RBBP6Q7Z6E9 1792 aaKnown RBP9.07□□□□□ -0.96
CNOT1-218ENST00000569732 XDHP47989 1333 aa9.06□□□□□ -0.96
CNOT1-218ENST00000569732 MYO3BQ8WXR4 1341 aa9.06□□□□□ -0.96
CNOT1-218ENST00000569732 PALM3A6NDB9 673 aaPredicted RBP9.06□□□□□ -0.96
CNOT1-218ENST00000569732 UBE2Q2LH0YL09 131 aa9.06□□□□□ -0.96
CNOT1-218ENST00000569732 VAMP4O75379 141 aa9.06□□□□□ -0.96
CNOT1-218ENST00000569732 DXOO77932 396 aaKnown RBP9.06□□□□□ -0.96
CNOT1-218ENST00000569732 FBXO45P0C2W1 286 aa9.06□□□□□ -0.96
CNOT1-218ENST00000569732 CCNYL3P0C7X3 344 aa9.06□□□□□ -0.96
CNOT1-218ENST00000569732 INHBEP58166 350 aa9.06□□□□□ -0.96
CNOT1-218ENST00000569732 CCDC152Q4G0S7 254 aa9.06□□□□□ -0.96
CNOT1-218ENST00000569732 MOB2Q70IA6 237 aa9.06□□□□□ -0.96
CNOT1-218ENST00000569732 OGFOD1Q8N543 542 aa9.06□□□□□ -0.96
CNOT1-218ENST00000569732 ZBTB38Q8NAP3 1195 aaPredicted RBP9.06□□□□□ -0.96
CNOT1-218ENST00000569732 HYPKQ9NX55 129 aa9.06□□□□□ -0.96
CNOT1-218ENST00000569732 TFIP11Q9UBB9 837 aaKnown RBP9.06□□□□□ -0.96
CNOT1-218ENST00000569732 LAMB1P07942 1786 aa9.05□□□□□ -0.96
CNOT1-218ENST00000569732 COL1A1P02452 1464 aaPredicted RBP9.05□□□□□ -0.96
CNOT1-218ENST00000569732 ATP5J2-PTCD1G3V325 749 aa9.05□□□□□ -0.96
CNOT1-218ENST00000569732 ELL2O00472 640 aaPredicted RBP9.05□□□□□ -0.96
CNOT1-218ENST00000569732 ATP2B4P23634 1241 aa9.05□□□□□ -0.96
CNOT1-218ENST00000569732 MMP16P51512 607 aa9.05□□□□□ -0.96
CNOT1-218ENST00000569732 TWISTNBQ3B726 338 aaPredicted RBP9.05□□□□□ -0.96
CNOT1-218ENST00000569732 ARMC9Q7Z3E5 817 aa9.05□□□□□ -0.96
CNOT1-218ENST00000569732 NUDT12Q9BQG2 462 aa9.05□□□□□ -0.96
CNOT1-218ENST00000569732 MED23Q9ULK4 1368 aa9.04□□□□□ -0.96
CNOT1-218ENST00000569732 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.04□□□□□ -0.96
CNOT1-218ENST00000569732 MANSC4A6NHS7 340 aaPredicted RBP9.04□□□□□ -0.96
CNOT1-218ENST00000569732 WNT10BO00744 389 aa9.04□□□□□ -0.96
CNOT1-218ENST00000569732 PDE8AO60658 829 aa9.04□□□□□ -0.96
CNOT1-218ENST00000569732 KCNH2Q12809 1159 aa9.04□□□□□ -0.96
CNOT1-218ENST00000569732 NBPF9Q3BBW0 867 aa9.04□□□□□ -0.96
CNOT1-218ENST00000569732 SPRYD7Q5W111 196 aa9.04□□□□□ -0.96
CNOT1-218ENST00000569732 APOBEC3FQ8IUX4 373 aaKnown RBP9.04□□□□□ -0.96
CNOT1-218ENST00000569732 ARMC2Q8NEN0 867 aa9.04□□□□□ -0.96
CNOT1-218ENST00000569732 ZNF428Q96B54 188 aa9.04□□□□□ -0.96
CNOT1-218ENST00000569732 UCN2Q96RP3 112 aa9.04□□□□□ -0.96
CNOT1-218ENST00000569732 SEC31BQ9NQW1 1179 aa9.04□□□□□ -0.96
CNOT1-218ENST00000569732 ZNF646O15015 1829 aaPredicted RBP9.03□□□□□ -0.96
CNOT1-218ENST00000569732 UNCXA6NJT0 531 aa9.03□□□□□ -0.96
CNOT1-218ENST00000569732 PCCAP05165 728 aaPredicted RBP9.03□□□□□ -0.96
CNOT1-218ENST00000569732 ZBTB48P10074 688 aaPredicted RBP9.03□□□□□ -0.96
CNOT1-218ENST00000569732 PDE4CQ08493 712 aa9.03□□□□□ -0.96
CNOT1-218ENST00000569732 DACT2Q5SW24 774 aa9.03□□□□□ -0.96
CNOT1-218ENST00000569732 LDLRAD1Q5T700 205 aa9.03□□□□□ -0.96
CNOT1-218ENST00000569732 STRIP1Q5VSL9 837 aa9.03□□□□□ -0.96
CNOT1-218ENST00000569732 PRAMEF18Q5VWM3 479 aa9.03□□□□□ -0.96
CNOT1-218ENST00000569732 OTOP1Q7RTM1 612 aa9.03□□□□□ -0.96
CNOT1-218ENST00000569732 ANKRD18AQ8IVF6 992 aa9.03□□□□□ -0.96
CNOT1-218ENST00000569732 CCDC191Q8NCU4 936 aa9.03□□□□□ -0.96
CNOT1-218ENST00000569732 YTHDC1Q96MU7 727 aaKnown RBP9.03□□□□□ -0.96
CNOT1-218ENST00000569732 PRDM9Q9NQV7 894 aa9.03□□□□□ -0.96
CNOT1-218ENST00000569732 TRIM17Q9Y577 477 aa9.03□□□□□ -0.96
CNOT1-218ENST00000569732 HTTP42858 3142 aa9.03□□□□□ -0.96
CNOT1-218ENST00000569732 MKI67P46013 3256 aaKnown RBP9.02□□□□□ -0.96
CNOT1-218ENST00000569732 ADH1BP00325 375 aa9.02□□□□□ -0.97
CNOT1-218ENST00000569732 PTPN12Q05209 780 aaKnown RBP9.02□□□□□ -0.97
CNOT1-218ENST00000569732 MAP3K11Q16584 847 aa9.02□□□□□ -0.97
CNOT1-218ENST00000569732 ERO1AQ96HE7 468 aa9.02□□□□□ -0.97
CNOT1-218ENST00000569732 CDC5LQ99459 802 aaKnown RBP9.02□□□□□ -0.97
CNOT1-218ENST00000569732 MTRQ99707 1265 aa9.02□□□□□ -0.97
CNOT1-218ENST00000569732 COA1Q9GZY4 146 aa9.02□□□□□ -0.97
CNOT1-218ENST00000569732 SCAF8Q9UPN6 1271 aaKnown RBP9.02□□□□□ -0.97
CNOT1-218ENST00000569732 PPP2R3BQ9Y5P8 575 aa9.02□□□□□ -0.97
CNOT1-218ENST00000569732 BRCA2P51587 3418 aa9.02□□□□□ -0.97
CNOT1-218ENST00000569732 TLL1O43897 1013 aa9.01□□□□□ -0.97
CNOT1-218ENST00000569732 CT47B1P0C2W7 299 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms