RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 KINO60870 393 aaKnown RBP9.68□□□□□ -0.86
SPG11-209ENST00000558253 IDH1O75874 414 aaKnown RBP9.68□□□□□ -0.86
SPG11-209ENST00000558253 APPP05067 770 aa9.68□□□□□ -0.86
SPG11-209ENST00000558253 LIG1P18858 919 aa9.68□□□□□ -0.86
SPG11-209ENST00000558253 PHKA1P46020 1223 aa9.68□□□□□ -0.86
SPG11-209ENST00000558253 CCT2P78371 535 aaKnown RBP9.68□□□□□ -0.86
SPG11-209ENST00000558253 STX1AQ16623 288 aa9.68□□□□□ -0.86
SPG11-209ENST00000558253 RC3H1Q5TC82 1133 aaKnown RBP9.68□□□□□ -0.86
SPG11-209ENST00000558253 TTLL5Q6EMB2 1281 aa9.68□□□□□ -0.86
SPG11-209ENST00000558253 PGBD1Q96JS3 809 aa9.68□□□□□ -0.86
SPG11-209ENST00000558253 LRRC2Q9BYS8 371 aa9.68□□□□□ -0.86
SPG11-209ENST00000558253 NYXQ9GZU5 481 aa9.68□□□□□ -0.86
SPG11-209ENST00000558253 PIH1D3Q9NQM4 214 aaKnown RBP9.68□□□□□ -0.86
SPG11-209ENST00000558253 CNTNAP4Q9C0A0 1308 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 SH2B2O14492 632 aaPredicted RBP9.67□□□□□ -0.86
SPG11-209ENST00000558253 NEMFO60524 1076 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 NTSR2O95665 410 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 CHGBP05060 677 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 FDPSP14324 419 aaKnown RBP9.67□□□□□ -0.86
SPG11-209ENST00000558253 CDC25BP30305 580 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 COL9A3Q14050 684 aaPredicted RBP9.67□□□□□ -0.86
SPG11-209ENST00000558253 TRIM29Q14134 588 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 SF3A1Q15459 793 aaKnown RBP9.67□□□□□ -0.86
SPG11-209ENST00000558253 CCAR1Q8IX12 1150 aaKnown RBP9.67□□□□□ -0.86
SPG11-209ENST00000558253 ELOA2Q8IYF1 753 aaPredicted RBP9.67□□□□□ -0.86
SPG11-209ENST00000558253 ZNF687Q8N1G0 1237 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 MARCH10Q8NA82 808 aaPredicted RBP9.67□□□□□ -0.86
SPG11-209ENST00000558253 TDRD7Q8NHU6 1098 aaKnown RBP9.67□□□□□ -0.86
SPG11-209ENST00000558253 KCNV2Q8TDN2 545 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 MRPS27Q92552 414 aaKnown RBP9.67□□□□□ -0.86
SPG11-209ENST00000558253 TIGD1Q96MW7 591 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 CCDC85AQ96PX6 553 aaPredicted RBP9.67□□□□□ -0.86
SPG11-209ENST00000558253 NAPBQ9H115 298 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 ANO10Q9NW15 660 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 BSDC1Q9NW68 430 aaPredicted RBP9.67□□□□□ -0.86
SPG11-209ENST00000558253 NAP1L2Q9ULW6 460 aaPredicted RBP9.67□□□□□ -0.86
SPG11-209ENST00000558253 HPS5Q9UPZ3 1129 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 NIP7Q9Y221 180 aaKnown RBP eCLIP9.67□□□□□ -0.86
SPG11-209ENST00000558253 MRVI1Q9Y6F6 885 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 NWD2Q9ULI1 1742 aa9.67□□□□□ -0.86
SPG11-209ENST00000558253 MYH3P11055 1940 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 ARAP2Q8WZ64 1704 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 ERICH2A1L162 156 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 GOLGA6L19H0YKK7 550 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 ZBTB43O43298 467 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 NR1I2O75469 434 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 CMA1P23946 247 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 PTGER2P43116 358 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 ME1P48163 572 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 METAP2P50579 478 aaKnown RBP eCLIP9.66□□□□□ -0.86
SPG11-209ENST00000558253 ANTXR2P58335 489 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 RBM6P78332 1123 aaKnown RBP9.66□□□□□ -0.86
SPG11-209ENST00000558253 ZRSR1Q15695 479 aaKnown RBP9.66□□□□□ -0.86
SPG11-209ENST00000558253 CAVIN4Q5BKX8 364 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 AKNAD1Q5T1N1 836 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 SARM1Q6SZW1 724 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 MFSD6Q6ZSS7 791 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 ANKRD18AQ8IVF6 992 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 IFNL3Q8IZI9 196 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 SYNE4Q8N205 404 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 LINC00301Q8NCQ3 95 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 ENGASEQ8NFI3 743 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 IGDCC4Q8TDY8 1250 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 STAG1Q8WVM7 1258 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 PIBF1Q8WXW3 757 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 MAP7D2Q96T17 732 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 BPIFA3Q9BQP9 254 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 ANKRD2Q9GZV1 360 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 ANAPC4Q9UJX5 808 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 DENND2AQ9ULE3 1009 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 MORC2Q9Y6X9 1032 aaPredicted RBP9.66□□□□□ -0.86
SPG11-209ENST00000558253 SLIT2O94813 1529 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 NUP98P52948 1817 aa9.66□□□□□ -0.86
SPG11-209ENST00000558253 ZNF804BA4D1E1 1349 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 CCDC69A6NI79 296 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 SPTLC2O15270 562 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 MYO1BO43795 1136 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 PPP6R2O75170 966 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 ZNF165P49910 485 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 HAND2P61296 217 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 RASGRF1Q13972 1273 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 STK38Q15208 465 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 SAFBQ15424 915 aaKnown RBP eCLIP9.65□□□□□ -0.86
SPG11-209ENST00000558253 VPS72Q15906 364 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 SLFNL1Q499Z3 407 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 ANO6Q4KMQ2 910 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 TMEM67Q5HYA8 995 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 FAM173BQ6P4H8 233 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 APOA5Q6Q788 366 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 NFXL1Q6ZNB6 911 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 TRIM22Q8IYM9 498 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 MAGEB6Q8N7X4 407 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 PRIMPOLQ96LW4 560 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 USP28Q96RU2 1077 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 NCOA5Q9HCD5 579 aaKnown RBP9.65□□□□□ -0.86
SPG11-209ENST00000558253 SPTLC3Q9NUV7 552 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 SLC12A7Q9Y666 1083 aa9.65□□□□□ -0.86
SPG11-209ENST00000558253 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.65□□□□□ -0.86
SPG11-209ENST00000558253 NRAPQ86VF7 1730 aa9.65□□□□□ -0.87
SPG11-209ENST00000558253 TCHHQ07283 1943 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms